Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0441900 |
| Transcript ID | LotjaGi1g1v0441900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gamma-glutamyl hydrolase; TAIR: AT1G78680.1 gamma-glutamyl hydrolase 2; Swiss-Prot: sp|O65355|GGH2_ARATH Gamma-glutamyl hydrolase 2; TrEMBL-Plants: tr|I3T794|I3T794_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0441900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93872909..93879931) extracted from Lotus japonicus Gifu genome v1.2.
GTGACAAGTGGGCCCGGTGAACGTGATATATTTTCAACACGTTGTTCAGCTGCAACATTCCGCAACAGCGACACTGATCA GTGATCACCTCCGTCATGTCAAACGACGCCGTTTGGGTTCTCTTCCTGGTCGCCGCCACCTTTCAATGCCTTCTTCTCTC CGCCGAGTCCCACTCGGCGATCCTTCTTCCTAGTCAACTCAACCGTAACACGCCGGCGAGTTGTCCCGCGCCTGACCCCA ACCTCTACTACCAGCCGGTAATCGGGATCGTCACCCACCCCGGCGACGGCGCTTCCGGCCGCCTCAGCAACGCCACCGGC GCTTCCTACATCGCCGCCTCCTACGTTAAATTCGTGGAGGTCGCTGGCGCCAGAGTAGTTCCCCTCATCTATAACGAGCC ACCGGAGAAGCTTTTCAAGGTATGAATCGTCCATTATCCTCTGTCAGTGTTACAATTAAAATTTAAAATCATCAATTGAA AGAATTTGGTAAAATGAAAAAAGCATTTATCATAGGATCTTAAATTACAGCATTTAAAAAATTGCTGTAATAAATCATTA CAGCATTTAATTTAATTTAACCAGCGTTTTTTTAGTTATTAAAAAAATATTTAATTGGTATGGGATCTTTTTTTAAGAGA GCTGTTATTAAGATTTTATTGACAATATTCAATGTTTTTTTTTTTTTACATAATCAAATGAGTTTAATGGTACCCTAGGC CTGGTAGCTCAGTTGACAACCCAGACAGTGTGTGGAGTAAGCTGCTCTTGGGTTCGATCCTAGCGGGAGTGATATAGAGC TTTAACTGTGACTAAATTCTGAATCCGTAATAGTAGGCTTCTGAAGGGTGAGGGTAGCTTATAAAAAAAATGAGTTTAAT AGATATGTCATTGTAAAATAGACAATCAATAAAGAATAATTATTTTTAATTAAAATTAAAATATATTTTCTAATTTGATG GAATTCAATTTTTTTTTACAAGTGCACGTACCTTTAATTTCAATCAAAAACATTTTGTAAAATATATTAAATACTGCACT ATTTTTCATTATCCTAAATTTTTCCACTCACGGTGGTGTGCGAATATTTATGATGCTATGTGTATATTTTTCAATTCATT GCAGAAGCTCGAATTGGTAAATGGAGTCCTCTTTACTGGTGGTTGGGAAAAAAGTGGATTGTATTTCGAAACTATTGGAA GAATATTTAAGGTATCTGTCTATTTATTTATTTTTCCCTTTACTACTCCCTTACGAATACTCGCTTCTTGCACATTTCTG AGTGATTTGTACCAGGAGACAGGAGTAAGTAAGTAACCACTTGCATTTGTTGGAAATTCTGTTTGCACCAGGGAAGGGAA GAAAAAACTGTGGCTTGTAGAATTGGAAATAATGATATAGTGGAGGAGTTAGTTATTAGAAATTGTATTACTTATACTCT TGTTAGTAGCTTTTTTCTTTTTTCAAGATGCTAAGGATGCTTCATTGATATATGAACTTAATTTGTTCATTGTTTAGGAT TTTAAGGTATTAATTTTTATTTGTCCATGCAGAAAGCTCTAGAGAAGAATGATGCCGGACACCATTTCCCTATATATGCC ATCTGCTTAGGTTTCGAACTTATAACAATGATCGTCAGCAAGGTAAGTTATAGCATGGTTTTATCGTTTGTGACTTCCTT TGTAAAATTCATTTGCCCGAAGAAGTTTGCAGATAATTCTTGTAAATCACCGTTGGATAATTTTCTGATTAATTTAATTC AAGCGGAATACATTTTATATATTGTCATGTTGCCTTGTGCTGTGAGCATTGTTTGGTTATAATTTCTCTTGGAACATGTG ATAGTAGAAAATTTGCCACTATGTCAACTTGGTAAATTTTACTTTGCATCTATGTTAGACATTTCATGAAATGTTGAGGA AAGCTGGAGACTTGTGCAACAATTCCTGTTGTATTCTTTTTGTGATTTTACAAGTTCGGCTGTTCTTTTGTTTGATAATA GGACAACAATATTCTTGAAGAATTTGCTGCATCAAATAAGGCATCTACTCTTCAATTTGTAGAGAATGTAAATATCAAAG GAACTCTATTTCAAAGGTAAACAATCCATTGTATTTCTTCTGAAGTTGCATTTGGTTCCCTTAATAGAAATTGCCAACTT TATTCCCTGGATGTTTTTTGTATATTTATGTTGTTTTACCCCTTTTTCGCTGAAGAGTATCCCCAATCGTCTAATTTTCT TGTTCTGTTCTTTTTGATAAAGATTTTGTTCCTTTTTATTTGATAAAATGTGTTCTCTCCTTTGTCTATCTTATACCATT TTTAGCAAGGGCATGGGATTCATTTACCGAAGATAATTTCTTTTATTAAAACAGACCTCATACATGGTTGCATTAAGACT CAATCCATATGAAATACTGTTATGCCTTGTACTTGGACATGAGGGTAACCTGTGATAATGGAGGTTGGTGTGCAATGATC AAAGAGCAAACATTTCTTGTGGGTAGGAATCTACTTTCTCTGTTCCCTTCTCAACTGGTTTGCTATTGTGTACCATATAA AATTCTTTCAAGTTTTAAGTTAGGCTACTTTCTGTACAAGTCCATATGAACTGTCAAACACAAAAGCCACTATGATAAGG TCTGATGCTTAGAATTCGTTTGGATAGAGATTTTTTGGACCTTATCTACTAGAAAAAAACTAAATGAGCTCCAATAAGTG CTCCTTTGCATTCAAACGGATTCTTTCTCACTTAGCAGTTAGCAAGTATGTAAAGACCAGTTACTGACCAAGTCCATCAG CATGTGGATGAAGCCACACTGCTTCCTACCAATATGGCATGACCAGATTTACCAGAATCCTCTTCTTTACCAGAAAGGGA ACATGATAAGATGATGATGACAAGGGATTTTGATTTGGCACAAAGATGAAATAAGAGAGAGTAAAAGATAATGAATGAAA GGTAAGCATGAAAAGAGAAAGACGGCCAAGAGATAACTTTGAGAGAGAAGAGGGGTGAGAGACTCTGGAGAACAATGCCA TCATACAAGAACTTCTCTCATTCCTGCAGGATTCAGATTTCCTCCAGATGTTTTAAGTTGGTGTCTATAAAAAAATTTCT CTTCATCTACTGTGAAGTTTATCTTCTTTTTTTATAGAAGTTTTAAATTTATAGGATTTTTATCATTTCTGTCACAGAAT TTTATGAACAAGTTATAGTTATTATATGTGAAATAATGAGGCTTCTTACTTGTATCTCACTTATTATAGTCACACTTAGT GTAGTTAGTATATAGCCTTTCCTAATTAGCGTTTCTCATGTTCTGTTAAGTAGTTAGAAACTTAGAATAGCTGGTAATAT AAAGTTAGTTGTGAGTTAGCTGTGCTATCTGAGTTAGTTGTGCTACTATATAACAGCACCTTTGAAATCAGTTACAGCTA ATTAAGAGTTCAGTTCATCTTTTCATTTCCTTCTCCTAAACTCTGATAGTTTTCATAATTACTCAGTTCTCTCTTTCTGG CAGATTTCCTTCAGACTTGTTAGAGAAGTTGAGTACAGATTGTCTTGTCATGCAAAATCATCATGTGAGTATTTATAGGC AATTAAACATGAGTCTTCTACTGAGTTTCACAATTTGACCAGTAAAATGTCATCAATTTGAGTATTTAGCTTCCTTGTGT GATCTTAACTTTAAATTTGCCCTGTTTTATACATTTACAACTTGTACATTTTTTCTGCCAAATCTATAATGGTACATCCC TTGGTGCACTTCTGAATCCGAACCATTGAATCAATTGAATGATTTTGATAACATGGTATATATGTGAGCATGATCTCAGG CAAGCTCAGTTATAGTACCACCATCACCTACCTTAAGCATCAGGTTCCATTATCTGATTCTTTTAGAGAAGAAATTAAAG CAGGTCTATGCCAGGCTATCTAAGATTCGAGGCCTCAGGAATGATGTCAATAACTCTGTTCCTACGCCTGTTGATTCATG TCCTAATCAAAGTTTGTATGATGATTTAAGTGAGGGTGGTCGTAGATATGTGAAGATTGAAAAGGTCATGATGGATGGCA GTGGACAATGAAGCATCAGTTATTTCATTTGGTATTAAAGATTATTCCATTGTGCCAGTATATGAAACTGAGTAATATGG TTCAAAGTGTTTATATTTTTTATTTTATATAATATTCAAAATGCTTGAATTTTAAAGGAGGGTGTTAGCACAATGGTTGG AGTTAGCAATGTGTGACTGAGCTTCATAGCACCGGACCTACCCCGTGCTTGAATTTTAAGTTTACAATTCACTTGTCAAC TTTCATCTATCTTGTGATTTTCCCCTCAGCTTTTGTAAGTAACCATTATAGCTTGACATTAATCTAGTGTATCCCACTTA ACAAACTAAAATTTGTGTACCTGGTTCTGAAGGTTCCCCACCTCACAATTGCCTGTAGTATTCCATTCTTTAGTTATGTG GATGTTGTTTATATGTTGAAAGTTGTAAATGTTGACTCTATCTTAGTTCTTAAACATTTAAAATACAGTTTAATGAAGAT TATTTTATATACATTTTCAAAATTCAGGAATATGATTTTTATCTGATATTGGTTCATGACAGTATGGCATATCCCCAGGA AAGCTTCAGGGAAATCACGAGTTATCTAGTTTTTTTGAGATCTTGACAACTTGTGAGGATAAAGATGATAAGGTATTCAA TATTGTAACTTGATTCCTGTTTGTAAATCAATTTTTTCACATATCCATAACCTGCCACTGGCTTCTTTCATAAGTAAATC TAATAGCATTAGTAATTGTTTCAGGTTTATGTTTCGACAATGCGTTCGCGTAACTATCCGGTGACTGCCTTCCAATGGCA TCCAGAGGTGATTAATGAATTTTCTATGCATGATCCAATTCCTCGTTACTATTTAATTTCTTCTATATAACATCCTTTTG TAAATGATGCCATAGAAAAATGCCTTTGAATGGGGCTCACGGGAAATTCCACACACGGAGGATGCCATTCAGATAACTCA GAACGCTGCCAATTTTTTGGTCAGGTTAGGACTCAGAATTTGATGATATATTCGTCAATTACTTGCTACTCATGCCTGAT AGATGGTTCTCCATCATGCTATCTAAATAGTTGACAAATTTATCCAGCGTAATTGCTTGTTTGTAATGAAAATAAAAGAT AATGTAATATATGTTTAGTGTTGTTTACAATGAGGGGAAGTATTATTGACTAGGTGATAGGTTATGGGTATTAACCATCA AGAATAGTGATAGGGGAATTAAATACAGAAATATGAGGAAAGGAATATTAGCATTATTGAGACAAATTTTGAGCTTGTGG GGAGGAAATGGAGTGCATCAGACTCATACTTCATGGATTTGGCACCAACTACATCTTAATTGTGGATTCAAATAATGTTG AGAAGTAGTTCACACTTGGTACCTATGAATGCTTGAGCTCCATTTGTCATTTCTCTTTTGGTGAACATATTTATGAATAT ATATAGCTTATGTTTACAATTGTTTTTCTACTTTCACGGATCTGGATTCAGTGAAGCTAGGAAATCCATAAACAGACCTG TTGCTCAAGAAGTACGTGACAATCTCATTTACAATTACAGTCCCACTTATTGCGGGAAAGCTGGGTAGGCCCAATTTGTA TTTACGACTTTGACATTAATTTATTTGTTTTTGCAGCATGTGAAGTCACTCATTTGATGTTTATACTACTTAATTGCAGG AAAGGATATGATGAAGTTTATATATTAGCACCAGTCTAAATGCTGGTCTTGGAATTGTTTTATACTCCCTCCGGTCCTAT TTATAAGCAACAAAAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAAGTAGATAAAATGCATTAAATTTGTCTTAAAT CAAAATAAACTTCCAAAATTACCCTTTGCTATTAGTGTTGGAAAGTGGGAAAGAGAGAGAATAATTAATGAAACACATTT TACAAGTTAGAATTAATAAGGGCATCATTGGAAAAAATTAATTAATATAGCTCAAACTTTCATTTGGTTCTTATAAAAAG GACCAAGGTTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAGGGAGTATTGGGTTGGCTTGTTTCAATTCCTCACTT GAGGGAGTTGTCCACTAATAACATGCATGTATGATTGCTTTATTATGATGTAACGTTGTGTGAGTAACTATTATTAGGCA AATTCTGTGGTACCCTGATTTTTTTTTGCTACGGTATCCCGACTAGATGAAATTGTGAAATTGAAGGGCAGAGAAAGAGA GAAGCTTAGACATTTTAACTTTTGTTGGAATCTTAGACATCATGTCGGTTATTGCAGCTCTTTTTAAGTTAGAATCTAGT GGTCGAAGTGAAAATGTATGCGATGTTAGAACAAGAGAGTTATTGACCACAATAAGAGTGAGATATGAAAATTGGTGTCT GGCGAACGACAAGATAATGAGATAATCTACTAAAATGTTCATGAATGATGGTGCTAGAGGCTTTTAGAAGTTAAAAAATT GGAGATAAAGAGGTTTTACATCATTTAAGGTATCGTACCCTCATTTAAATTAAGGTACCACAACAAGCACCCTATTATTA TTGTTATTATTATGCACAAAAATAAAAATAAAAAGATACCATTTGTTCCAAAAGCAAAGCTATGCTCCTTTCGCATCTTG TACACTATCTTCACTTCTGCTTGAAAATAGCTGGTAGAGAAAGTATTTACTATTTCCGTTTGAAGATGATGACTTGCAGC ATTAGTATAACTCTTTTTTAGTCAGTTTTACACTATCAACAATAAAATATGTTTTTTTTGGGATCTGAACACTTGAAAGT AAGATGTTAGTCTAATCCCATATAAATTAAACTGCCGTCTTAATTTTCGGATGCGATGTAAGGTTTCAAAATTCATCTAC CTGTCTGTTTGGTCAGTAACTTTTTTTTTTGGTCAGGGGGAGGGGATTGGTGGTTTTTACACC
CDS sequence (LotjaGi1g1v0441900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAACGACGCCGTTTGGGTTCTCTTCCTGGTCGCCGCCACCTTTCAATGCCTTCTTCTCTCCGCCGAGTCCCACTC GGCGATCCTTCTTCCTAGTCAACTCAACCGTAACACGCCGGCGAGTTGTCCCGCGCCTGACCCCAACCTCTACTACCAGC CGGTAATCGGGATCGTCACCCACCCCGGCGACGGCGCTTCCGGCCGCCTCAGCAACGCCACCGGCGCTTCCTACATCGCC GCCTCCTACGTTAAATTCGTGGAGGTCGCTGGCGCCAGAGTAGTTCCCCTCATCTATAACGAGCCACCGGAGAAGCTTTT CAAGAAGCTCGAATTGGTAAATGGAGTCCTCTTTACTGGTGGTTGGGAAAAAAGTGGATTGTATTTCGAAACTATTGGAA GAATATTTAAGAAAGCTCTAGAGAAGAATGATGCCGGACACCATTTCCCTATATATGCCATCTGCTTAGGTTTCGAACTT ATAACAATGATCGTCAGCAAGGACAACAATATTCTTGAAGAATTTGCTGCATCAAATAAGGCATCTACTCTTCAATTTGT AGAGAATGTAAATATCAAAGGAACTCTATTTCAAAGATTTCCTTCAGACTTGTTAGAGAAGTTGAGTACAGATTGTCTTG TCATGCAAAATCATCATTATGGCATATCCCCAGGAAAGCTTCAGGGAAATCACGAGTTATCTAGTTTTTTTGAGATCTTG ACAACTTGTGAGGATAAAGATGATAAGGTTTATGTTTCGACAATGCGTTCGCGTAACTATCCGGTGACTGCCTTCCAATG GCATCCAGAGAAAAATGCCTTTGAATGGGGCTCACGGGAAATTCCACACACGGAGGATGCCATTCAGATAACTCAGAACG CTGCCAATTTTTTGGTCAGTGAAGCTAGGAAATCCATAAACAGACCTGTTGCTCAAGAAGTACGTGACAATCTCATTTAC AATTACAGTCCCACTTATTGCGGGAAAGCTGGGAAAGGATATGATGAAGTTTATATATTAGCACCAGTCTAA
Protein sequence (LotjaGi1g1v0441900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNDAVWVLFLVAATFQCLLLSAESHSAILLPSQLNRNTPASCPAPDPNLYYQPVIGIVTHPGDGASGRLSNATGASYIA ASYVKFVEVAGARVVPLIYNEPPEKLFKKLELVNGVLFTGGWEKSGLYFETIGRIFKKALEKNDAGHHFPIYAICLGFEL ITMIVSKDNNILEEFAASNKASTLQFVENVNIKGTLFQRFPSDLLEKLSTDCLVMQNHHYGISPGKLQGNHELSSFFEIL TTCEDKDDKVYVSTMRSRNYPVTAFQWHPEKNAFEWGSREIPHTEDAIQITQNAANFLVSEARKSINRPVAQEVRDNLIY NYSPTYCGKAGKGYDEVYILAPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 6 | 21 | 16 | - | – | |
| PANTHER | 21 | 341 | 321 | 3.2E-159 | – | |
| PANTHER | 21 | 341 | 321 | 3.2E-159 | ||
| Phobius | 22 | 27 | 6 | - | – | |
| Phobius | 28 | 343 | 316 | - | – | |
| ProSiteProfiles | 45 | 341 | 297 | 101.667 | ||
| Gene3D | 51 | 340 | 290 | 3.4E-78 | ||
| Pfam | 54 | 270 | 217 | 3.1E-18 | ||
| SUPERFAMILY | 74 | 322 | 249 | 1.47E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Omega peptidase activity | Catalysis of the removal of terminal peptide residues that are substituted, cyclized or linked by isopeptide bonds (peptide linkages other than those of alpha-carboxyl to alpha-amino groups). | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0441900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…