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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0452400 |
| Transcript ID | LotjaGi1g1v0452400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aminotransferase like protein; TAIR: AT3G08860.1 PYRIMIDINE 4; Swiss-Prot: sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial; TrEMBL-Plants: tr|G7KX17|G7KX17_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi1g1v0452400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:95233063..95240511) extracted from Lotus japonicus Gifu genome v1.2.
GACGATCCATTTTCATTCTCTATTTAAACCTCCCTCATTCTTCTCAATTTCTTCCAAATTCTCCTTCTGTCTTTCACCCT CTCCCCTCTATTTCTCTCTCTCTCAATCACCTCCAACCGCGTCGGGTCGGGCCCTACATTGCCGGAGCCGCCGCCGCCGA CGTCCGGTACAAATGGCGGGATCCCTAGCATCACGCCTCATCCTACGCCGATCACAACCACCTCCACCGCCGTCAATCCA ATCATTCTTCCGACGCGGCATTTCTCAGCCGGCGGCGGAGAGAACTAAAGAAGCCACCCTCCCCGCTCCGCCGACCGAAT TTCCGCCGTTCGATTACACTCCGCCGCCGTACTCCGGTCCCTCCGGCGAAGAAATCATCGCGAAACGGAAGGAGCATCTC AGCCCCTCGCTCTTCCATTTCTACAAAACTCCGGTGAGGATGCGCCGCACCGGATAACAATAACAATAATTATAACCGTT TTTGATTCTGTTATAACTGTCTAACTAACTAACTAACTTACGGTGGTTACTGTGGAGGTTGCAGTTGAACGTGGTGGAGG GGAGGAGGCAGTACCTGTTTGATGATACAGGGAGGAGGTACATCGATGCGTTCGGAGGGATTGCGACGGTGTGCTGCGGC CACTGCCACCCTGATGTGGTGGCGGCGATCGTCGAACAAACGAAACGGTTGCAGCACTCGACGGTTCTTTACCTGAACTC TGCCATCTCAGATTTTGCTGAGGCCTTGGCTTCTAAGCTTCCTGGTAATCTTAAGGTAAGCCTTGATTAACGTCACACTA ATCGGAATCGTGTCATTTTTAATTGTTAATTAATTTTTTCCATGAAAATTTAGTTTTTATCTTTAAAATTAAAAAAATTA GCTACGCTCATTCTTATGAGACATTTGAACTTCACCATAAACCCAGATTGGAATTACGAGAGCCAGGAGCAATATTTATC ATATTAAAAGCAAAATAGTTACACCAAAAATAATTAGTGATAGTATTTTTTTATCGTGTTATTTAATGTATGGTGGAATA CTAGAGTACTAATTTTTTTATTATATTATCATATTAATATGTAAACACTAAACATTATCAACATGAAAATATTATAATGG TCATATGAAATAATGAGTTACCCTTTAGTCAAAAGACAAATAATAATAACTCAAGATTTTGCATATCATTGGGAATTAAG GAGCTTTGAATAAATTGTCAGTACTTGTTTGGAAACTAGTGTGAGAATCCTAGATTACGGTTCTTATAAGAATCAAATAC TCCAATAAACTTAGAGTAAATAAATAAATAAGTAATAAACTTAACCTCGAAATATAGTTTTCTTAAAGAAAATATGATTA ATATAATTATTAAAATTAAACTCAATTTATACTATCTCTAAAATGATAGCTCAAATAGTAAAAATTAGAGGACATATGAG TCGGGAGAGAAAAGTACATAGATCAATCTTTATAGCATGCAATTTATCTTTTTGAGGTAAGAAAAACTATTTCTCTTTTT CAATCAACATGTCACACTTTTCTATTATTGTGAGCGTAATTCAATTATTTTCTATTACTTTCATTAGATATAAAGGATAT GGTCCTTATAACATGATTGGTAGTGTAAACCTGTCTAAAGTTTATTTGTGCATATATATACTCAATTGTTTTCAACCAAA TAAAAAAAAATGATTACTTTAATTAAAATAAAAAATAAATATTACTGCTCATCCTATAATATGATCCCACAAGGCATAAC TTAAATTTCTTTTTTGGGTTACATGAAGGGTTAAGCCCAAAACAGAAAGAAAACTATACTAAGATAGAACGTGGGAAAGT AACTCTCATCTAATCAAACAGCAAGACATAACTTAATTGAATATCAGTGAAATATTACTTTACATTAATAGTGCAAATTA TACTCTTTAGTAGTGTCATGACACCCAGCTGCACTTTTAGTAGTGTTAGATAATTAATTAAGATATTTTTGGTCAAAATA ATTAATTCAATACAAAATTCAAATTAATTCTTATAAAATTGACGAATAAACCCCGATAATTGATTCTTATAATTAGAACC TGAAGTAATATTTTTCTTTTCATAATGACGACTGACGAGTTGTAAGATAAGAATATATAAGAATCTGTTAAAATAGAGTG CATAAGATTCTCTTGTGAGCTACGTACGAACAGATGTCAACCTAATAAACTTTCTTTGATTTGGTACACAACCTAATTAA CGTTTAAGTGTAGTAGTTAGGTTCCATAGTAAGCAACTACATGATGAATAAAAAAATACTGTTTAGTCCATATCAGATAA CCATGTTTAATTTCCAAATTGTCAATTTCCATGTGCTATTATCGTCGTGGGACCGCGGTTTAGGTTGGATGATGATGGAG CTATACTTGACGTGGAGGGATATAGATGCTAACAACTGGTTTGGCGCGTGGCCAAATTAATAATAACTTTCATTTTTATA CACAAGAATTCGGATTCAGCACTCTTTGATTATTGAATAACGTGGTTTTTTTATTAATCAAAATTATATTTCATTATAAT TAATTGACTTAAAAAATAATAACAATAATAATAATAATCTTAGCACACTCAGACCAGCAAGGTCTAACAACAGGTAGATA GCTGATCATTCAGGATTAAAATCCCTGGACGATACGTATAGAGAAAAATTTGTTGGAAGAGACATATACTGATATACATG TAGCGTGATTTCTGAGTCTTAAATGATTAGTCTCAAAGCTGCCTAGTGTGAGAATACATTGAAAACTAAAAATAATATCA TTAGAGAAAGGGTTGATAATAGACCTATTTTAAGATAAAATAAAATTGTATTATTTTTAGTGAGAAAGGCTTTAGTCTGT TTTTACTTTACTCAGGTGGCGTTTTTTACAAATTCTGGAACGGAAGCAAACGAATTGGCTATGATGATAGCAAGGCTGTA CACTGGGTGCCATGACATTATATCTGTAAGGAATTCTTACCATGGAAATGCAGCTGGGACGATGGGAGCCACAGCTCAAA GTATCTGGAAATTTAATGTCGTACAGGTACATATTTAATTTCCTCCCAGTGATTTCTCTTATAATAAGTACATGTACAAA TTGAGGACCACTAACATAACTTTTTTATGTAATTTTTTTTTTGTTGACATATATGTCTTTAATATTTTTGATTAAATTAT TCCAGTACAATAATTATTTGTCCACACCTCTAAATTGAGGTGGAAAGAAGTGGAGGAAGAGAGAGATAGGAAGAAAAGAA AAAGTAAGAAAGAGAAAGTATAAGATGTGATAGATGATAAGAGGAGAGAAATAGAAATAAAAATAGGTGGAAATGAAGTG TATAAATAAAGAGGTATGTATATATCATTACTCATTCCAGTAGGTATTATACTGTGATATTATTATTAAAATATTTCTAT TTTTAATAATTTTATTTTAGTTCCTGACCTAAGGGCCTGTTTGGTTTGTACGTTTTCTGTTTTCATTTTCACTAAAATTA GAAAATAGGAGTGAAAATATGTTTGGTTAATTTTTTGAAAATGTTTTCTTAGAAAATATTTTCGGAAATGGGCTCAAATA TGAAAATAAGAAAAAGACGTTTTCATTGTTTTTTTTGAAAATCTGTGAAAATGGAAACAGTGGACACGCGGTGGCTGTCT CGTAAATAAGTGGAACTTTAATTTGTATTTGCTTTAAGTACTTACGCGTTCTGAGCTCAAATCCTGCGCACACCAAAATT TATCCTATTTAACACAATAGTACTTTATTTGGTTCCGTGCCATTTGTTACTGCATCACGAGAAATTTGTCATCATCCATA TTTTATTAAAATCCTTTTTATTTTATTCAATTTGTTATTAATCATGTACTCAAGTCAAACTTTTTTCTTTTGAAATTAAG TCAAACTACTCATGTTTATCCATATTTACGTTATCTATACAAACAAACATAACGTCAATATTTTTTTTATCCATATTTAT AATTATTTTGTTCAGAATGTTTTGTACTACTTTACATTTTTTTATTCCATTCTCTTTTTTATTTTTGTAGATGTTAAAAA ATAATATTTTATTATCATTAATAACCCACATAATAAAATTTGTTCATAAATTATTCATATATAAAAGTTTAGATATACTC TTTTATTATTTAAAAGTTATTTTCATAATCATTTGAAAATAGTTTAACCAAACACATTTTCAATGTTTTCATTTCCAGAA AATGAAAAATATGAAGTTAAACCAAACATATTTTCTTAATTTCAAAAGTTTGAAAATGAAAATCATTTTTAGAATATGAA AACAGAAAATGAAAATAAAAAATATTTTCTCAAATCAAACAAGCCCTAAATTTTCACTTCACTTTCACAAATCAATCAAT GAAGAACAAAATTGGTCTTAAGTTCACTTACGACGATGTTGACAAAGCTAGTGAAAGGGACTCCCATGCTCTAGATAGGT GACGCAAACTTTCACTTAAATTATATGTACGTGTTCTGATAGCGACACCAACGGAGTATGGGCTTTCTTGACACATACTT TTCTTTTTATACTTCAATCAACTGCGAAAGCGACCCCTTCATTATCGTTAGCTAGCATTTTAAATGTAGAATAATATTTG TGTTTGTATTTGTCTAACTTTTTTTTTATTTTTACTTTTGGTGAATTATGAAACAGAGTGGTGTTCATCATGCAGTAAAT CCTGACCCTTACAGAGGTCTTTTTGGTTCTGATGGTGAGAAGTATGCAAGAGATGTTGAGGAGATTATCAATTTCGGAAC TTCAGGAAGAGTTGCTGCCTTCATATCTGAAGCTATACAGGTATGTATCTAATTGACCCATACACAGATCCAACTTGGTT AGAAAGTAGAAAAATTCAATTAATTTTTATTTTTTTGAAAGCGACTCTTTTACTCCCTCCTTTTGTGAAAACATTTGTCA TCACATGCCATAAGTGAGCTAGAATGATTTTACTCCAAGGTAATTAAATCTATGGTGATTTAGATACTCTCATTCACTTG TTGGTGCACATGTGTAGATTTTTGTCTACTTATTTTCTATGTTTTTCTAGTTGCCTCTGCCATGTGCACATTGTAGTGAT CAGTGATGGAATAAGAGTGCTACTAACATTCTCTTTCTAACACTCTTTCCTTTATTGATTAAAATTGATGTGTGTCCCAA CAAATTGTGAGTGAGACGCATATAATTGAGTGGACCTTACATGAATTTTAACTGATAAAAGAAAGAGGGTACGGAATAGA ATGTCAAAGATAGCATTTGCTAACATTTCGCATCTCTTGTATTGGAATCTTACTCAACATTAGATAGACCACTTATCCGT GGCGGATAAATTTATAATTAAATATTTTAGGATAAGATAATTGCATAGTATCAGTCATTCAGTTTGGTGTAAAATAATGT TTTATGAAGTTAATCAATCTGTTTAGTATAATTCCCTATCTAAAGTGGATTACTCATATTCTAAGCATTTTTGCTAACAA TCACTTTTCTTGATATACTGTTCTTGATCATGGTAGGGAGTGGGGGGCATAGTTGAACTGGCTCCTGGTTACTTAGCTTC AGCCTACGACAAAGTTAGAAAAGCTGGAGGTCTTTGTATCGCGGACGAGGTTCAGTCTGGGTTTGCACGCACTGGCAGTA ATTTCTGGGGATTTGAAGGCCATGGTGTTGTACCTGACATAGTAACAATGGCAAAGGTAACTCAACTCTTCTCACCCTCT TGATTAATTGACAAACATAAGGCAAGTGTATTAGAATATTGTATTGGAACATTATAGTATGTTCGGATCATTTTTTCTAT CGTTTGAAAATTCTTCTACAATTGATTTAAAATCCAAAGTTAGATCTGAGAATAAGCTTTTGTGAATAGTTTTTACATAT CAGAATTGATTCTAAAGAATAAAGATTAACTGATACAGATGCTATCATAAAAACTTCTCTCCATAGTTGATTTTAGCTTT AAAATCAATTAGAGAAAGATTTATATTTTAAAAACATGCTAAGCTAGCCAAAGAATGTAGAATATTTGCATTGTAATTGT ATGGTCATGAAATGGAGATGCAGATTGTAGCAGAAACTATTTGGTCCTTATCCATATATGGTAGATCTATATGCTCTTCA TTGTTGGCTACTTGGCTTGTTTTAATTAGTTTTGCTATTGGCAGGGAATTGGAAATGGAATTCCTCTTGGGGCTGTTGTC ACTACCCCTGAGATTGCTAAGGTCTTGACTCAAAGAAGTTACTTTAATACCTTTGGAGGGAATCCTGTTTGTACTGCTGC AGGATTGGCTGTATTAAGAGTAATAGAGAAAGAGAAGCTTCAACAAAATGCATTTGTAGTGGGGTCCCATTTGAAAGAGA GGCTTAATGCACTCAAGGACAAATATGAATGTAACAATTCATCCCTTACTCCTTTGTCTATTCTAGATTAGTGCTCGATC ATTCATTAATTCATTATAGAAATAGTTACATGATGGAGAACAGAGTACCTTAACTGAGATCCATTCACATTTTTCCCCTT CTACCATTTCTTTTATGTTTCTAAACAAACTTGTTGGTTTTCTTCTAATAGTGATAGGTGATGTGAGAGGACAAGGCATG ATGCTTGGAGTTGAACTCGTCACTGATCCCAAACTTAAAACACCAGCAAAAGATGAAACACTGTATGTGATGGACAAATT GAAAGGTAAATTCTGAACCCCTTCAGAGCAAGTTTTGGTTCTAGTCTTATTTTCTTTTCCTTCTGTTTTCTATGTTACTA ATTAGCTCTTCTGCTGTTACCACAGAATTGGGAGTGCTGGTTGGAAAGGGTGGTTATTATGGTAATGTATTCAGAATCAC ACCTCCCCTGTGTTTCACTAAAGAAGATGCAGGTTAGCCTTGGCCTCAAATTTTCTTTTTGTTGACACTTTATAAGTAGT ACTAGTATGTAATACTAACACATCCTGTGTATTTTTGTGGGTGCAGATTTCCTGGTGGATGCAATGGACTACACATTATC TAGAATGTGAAAGTGAAATAAGATCCAACTGTAAATAAATGACTACTTTATTTTATAATGATAAGACAAGCTGTGTTAGA TCTTCAATCTTGACTCTAGCAAGTAAAATGGGCAACTCTCCATATCTGATTTAGAGTTATGTTGCTCTCTCCTTATTAAT CAAATTATAATTTCAAAACTCTGTTATTATCTGTCATTATATGTCATTTATTATTACCGAGAAATATTTTGATGGTCAAT TATGAGAGATAAGAGAGCAAAAATAAGAAGGGCATAGAAAAGTTTTCCAAGAAAAATTTAATTTTTTTACTGCAAACCAT TTAGACTCTTAACTCTAAAGTCTTGGCCGCTGGGGAACTTGAAGAAAATATTTGAGGGAGCATAATTAATATTTTTACTA TATGAATTA
CDS sequence (LotjaGi1g1v0452400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGATCCCTAGCATCACGCCTCATCCTACGCCGATCACAACCACCTCCACCGCCGTCAATCCAATCATTCTTCCG ACGCGGCATTTCTCAGCCGGCGGCGGAGAGAACTAAAGAAGCCACCCTCCCCGCTCCGCCGACCGAATTTCCGCCGTTCG ATTACACTCCGCCGCCGTACTCCGGTCCCTCCGGCGAAGAAATCATCGCGAAACGGAAGGAGCATCTCAGCCCCTCGCTC TTCCATTTCTACAAAACTCCGTTGAACGTGGTGGAGGGGAGGAGGCAGTACCTGTTTGATGATACAGGGAGGAGGTACAT CGATGCGTTCGGAGGGATTGCGACGGTGTGCTGCGGCCACTGCCACCCTGATGTGGTGGCGGCGATCGTCGAACAAACGA AACGGTTGCAGCACTCGACGGTTCTTTACCTGAACTCTGCCATCTCAGATTTTGCTGAGGCCTTGGCTTCTAAGCTTCCT GGTAATCTTAAGGTGGCGTTTTTTACAAATTCTGGAACGGAAGCAAACGAATTGGCTATGATGATAGCAAGGCTGTACAC TGGGTGCCATGACATTATATCTGTAAGGAATTCTTACCATGGAAATGCAGCTGGGACGATGGGAGCCACAGCTCAAAGTA TCTGGAAATTTAATGTCGTACAGAGTGGTGTTCATCATGCAGTAAATCCTGACCCTTACAGAGGTCTTTTTGGTTCTGAT GGTGAGAAGTATGCAAGAGATGTTGAGGAGATTATCAATTTCGGAACTTCAGGAAGAGTTGCTGCCTTCATATCTGAAGC TATACAGGGAGTGGGGGGCATAGTTGAACTGGCTCCTGGTTACTTAGCTTCAGCCTACGACAAAGTTAGAAAAGCTGGAG GTCTTTGTATCGCGGACGAGGTTCAGTCTGGGTTTGCACGCACTGGCAGTAATTTCTGGGGATTTGAAGGCCATGGTGTT GTACCTGACATAGTAACAATGGCAAAGGGAATTGGAAATGGAATTCCTCTTGGGGCTGTTGTCACTACCCCTGAGATTGC TAAGGTCTTGACTCAAAGAAGTTACTTTAATACCTTTGGAGGGAATCCTGTTTGTACTGCTGCAGGATTGGCTGTATTAA GAGTAATAGAGAAAGAGAAGCTTCAACAAAATGCATTTGTAGTGGGGTCCCATTTGAAAGAGAGGCTTAATGCACTCAAG GACAAATATGAATTGATAGGTGATGTGAGAGGACAAGGCATGATGCTTGGAGTTGAACTCGTCACTGATCCCAAACTTAA AACACCAGCAAAAGATGAAACACTGTATGTGATGGACAAATTGAAAGAATTGGGAGTGCTGGTTGGAAAGGGTGGTTATT ATGGTAATGTATTCAGAATCACACCTCCCCTGTGTTTCACTAAAGAAGATGCAGATTTCCTGGTGGATGCAATGGACTAC ACATTATCTAGAATGTGA
Protein sequence (LotjaGi1g1v0452400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSLASRLILRRSQPPPPPSIQSFFRRGISQPAAERTKEATLPAPPTEFPPFDYTPPPYSGPSGEEIIAKRKEHLSPSL FHFYKTPLNVVEGRRQYLFDDTGRRYIDAFGGIATVCCGHCHPDVVAAIVEQTKRLQHSTVLYLNSAISDFAEALASKLP GNLKVAFFTNSGTEANELAMMIARLYTGCHDIISVRNSYHGNAAGTMGATAQSIWKFNVVQSGVHHAVNPDPYRGLFGSD GEKYARDVEEIINFGTSGRVAAFISEAIQGVGGIVELAPGYLASAYDKVRKAGGLCIADEVQSGFARTGSNFWGFEGHGV VPDIVTMAKGIGNGIPLGAVVTTPEIAKVLTQRSYFNTFGGNPVCTAAGLAVLRVIEKEKLQQNAFVVGSHLKERLNALK DKYELIGDVRGQGMMLGVELVTDPKLKTPAKDETLYVMDKLKELGVLVGKGGYYGNVFRITPPLCFTKEDADFLVDAMDY TLSRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 54 | 54 | - | – | |
| PANTHER | 41 | 485 | 445 | 9.1E-273 | – | |
| PANTHER | 41 | 485 | 445 | 9.1E-273 | – | |
| PIRSF | 59 | 192 | 134 | 8.3E-6 | ||
| Gene3D | 62 | 477 | 416 | 4.8E-141 | ||
| CDD | 72 | 479 | 408 | 6.18396E-152 | ||
| SUPERFAMILY | 79 | 483 | 405 | 1.39E-120 | ||
| Pfam | 86 | 480 | 395 | 2.6E-92 | ||
| Gene3D | 122 | 380 | 259 | 4.8E-141 | ||
| PIRSF | 186 | 485 | 300 | 4.5E-30 | ||
| ProSitePatterns | 296 | 334 | 39 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Transaminase activity | Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi1g1v0452400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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