Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005814
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 42 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.144s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0182009.1
n.a. PREDICTED: acetylornithine aminotransferase, mitochondrial-like [Glycine max] gi|356520746|ref|XP_003529021.1| chr0 88878795 88882416 +
5 domain predictions
2 GO terms
Lj0g3v0279699.1
n.a. PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| chr0 145168951 145169940 +
3 domain predictions
2 GO terms
Lj0g3v0279709.1
n.a. n.a. chr0 145168951 145169940 +
3 domain predictions
2 GO terms
Lj0g3v0279719.1
n.a. PREDICTED: probable ornithine aminotransferase-like, partial [Cucumis sativus] gi|449533799|ref|XP_004173859.1| chr0 145169887 145171086 +
3 domain predictions
2 GO terms
Lj0g3v0279729.1
n.a. Ornithine-delta-aminotransferase isoform 1 [Theobroma cacao] gi|508780402|gb|EOY27658.1| chr0 145171033 145171931 +
4 domain predictions
2 GO terms
Lj0g3v0279739.1
n.a. n.a. chr0 145171033 145171931 +
4 domain predictions
2 GO terms
Lj0g3v0279749.1
n.a. ornithine aminotransferase [Glycine max] gi|351727128|ref|NP_001237150.1| chr0 145171878 145174523 +
3 domain predictions
2 GO terms
Lj1g3v2444980.1
n.a. Alanine glyoxylate aminotransferase-like protein [Medicago truncatula] gi|357506541|ref|XP_003623559.1| chr1 28529110 28535854 -
5 domain predictions
2 GO terms
Lj1g3v3330440.1
n.a. PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cicer arietinum] gi|502130644|ref|XP_004500721.1| chr1 38099663 38102220 -
5 domain predictions
2 GO terms
Lj1g3v3330450.1
n.a. PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Glycine max] gi|356507674|ref|XP_003522589.1| chr1 38100235 38102220 -
5 domain predictions
2 GO terms
Lj1g3v3330450.2
n.a. PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cicer arietinum] gi|502130644|ref|XP_004500721.1| chr1 38100235 38101012 -
4 domain predictions
2 GO terms
Lj3g3v0599580.1
n.a. PREDICTED: acetylornithine aminotransferase, mitochondrial-like [Glycine max] gi|356520746|ref|XP_003529021.1| chr3 6488692 6492249 -
5 domain predictions
2 GO terms
Lj3g3v3558220.1
n.a. Pyridoxal phosphate-dependent transferases superfamily protein [Theobroma cacao] gi|508701290|gb|EOX93186.1| chr3 43374900 43379035 -
4 domain predictions
2 GO terms
Lj3g3v3569310.1
n.a. PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Cicer arietinum] gi|502144355|ref|XP_004505667.1| chr3 43414276 43425959 -
6 domain predictions
2 GO terms
Lj3g3v3569310.2
n.a. Aminotransferase y4uB [Medicago truncatula] gi|357474027|ref|XP_003607298.1| chr3 43416937 43427687 -
3 domain predictions
2 GO terms
Lj4g3v2081410.1
n.a. PREDICTED: l-Lysine-8-amino-7-oxononanoate aminotransferase-like [Glycine max] gi|356550752|ref|XP_003543748.1| chr4 28606786 28617233 +
4 domain predictions
2 GO terms
Lj4g3v2313530.1
n.a. PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| chr4 32221070 32228305 +
5 domain predictions
2 GO terms
Lj4g3v2468430.1
n.a. PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| chr4 33764399 33771393 +
5 domain predictions
2 GO terms
Lj4g3v2800580.1
n.a. PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like [Cicer arietinum] gi|502140049|ref|XP_004504034.1| chr4 37478138 37481931 +
4 domain predictions
2 GO terms
LotjaGi1g1v0452400.1
n.a. Aminotransferase like protein; TAIR: AT3G08860.1 PYRIMIDINE 4; Swiss-Prot: sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial; TrEMBL-Plants: tr|G7KX17|G7KX17_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi1g1v0452400 LjG1.1_chr1 95233063 95240511 -
5 domain predictions
2 GO terms
LotjaGi1g1v0557700.1
n.a. Glutamate-1-semialdehyde 2,1-aminomutase, putative; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|I1JSD2|I1JSD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 LjG1.1_chr1 108993018 109004286 -
4 domain predictions
2 GO terms
LotjaGi1g1v0557700.2
n.a. Glutamate-1-semialdehyde 2,1-aminomutase; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|A0A1J7G7D4|A0A1J7G7D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 LjG1.1_chr1 109001992 109002552 -
2 domain predictions
2 GO terms
LotjaGi1g1v0557700.3
n.a. Glutamate-1-semialdehyde 2,1-aminomutase; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|G4W9I5|G4W9I5_MEDTR Glutamate 1-semialdehyde aminotransferase; Found in the gene: LotjaGi1g1v0557700 LjG1.1_chr1 109001992 109003826 -
4 domain predictions
2 GO terms
LotjaGi1g1v0557700.4
n.a. Glutamate-1-semialdehyde 2,1-aminomutase, putative; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|I1JSD2|I1JSD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 LjG1.1_chr1 109001992 109004090 -
4 domain predictions
2 GO terms
LotjaGi1g1v0596900.1
n.a. Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151RD85|A0A151RD85_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0596900 LjG1.1_chr1 113655307 113659099 -
5 domain predictions
2 GO terms
LotjaGi3g1v0070000.1
n.a. Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7L145|K7L145_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070000 LjG1.1_chr3 7615377 7619682 -
5 domain predictions
2 GO terms
LotjaGi3g1v0070000.2
n.a. Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7L145|K7L145_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070000 LjG1.1_chr3 7616006 7619059 -
5 domain predictions
2 GO terms
LotjaGi3g1v0534100.1
n.a. Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I1LPE4|I1LPE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 LjG1.1_chr3 95093359 95108693 -
4 domain predictions
2 GO terms
LotjaGi3g1v0534100.2
n.a. Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I3SGH8|I3SGH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 LjG1.1_chr3 95094954 95106777 -
4 domain predictions
2 GO terms
LotjaGi3g1v0534100.3
n.a. Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I3SGH8|I3SGH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 LjG1.1_chr3 95094954 95107319 -
5 domain predictions
2 GO terms
LotjaGi4g1v0298400.1
n.a. Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67241841 67251468 +
3 domain predictions
2 GO terms
LotjaGi4g1v0298400.2
n.a. ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7LWW0|K7LWW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67248308 +
2 domain predictions
2 GO terms
LotjaGi4g1v0298400.3
n.a. glutamate-1-semialdehyde-2,1-aminomutase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67250492 +
3 domain predictions
2 GO terms
LotjaGi4g1v0298400.4
n.a. Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67250493 +
3 domain predictions
2 GO terms
LotjaGi4g1v0298400.5
n.a. Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67250493 +
3 domain predictions
2 GO terms
LotjaGi4g1v0298400.6
n.a. ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67250493 +
2 domain predictions
2 GO terms
LotjaGi4g1v0298400.7
n.a. ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 LjG1.1_chr4 67242014 67250493 +
2 domain predictions
2 GO terms
LotjaGi4g1v0340700.1
n.a. Aminotransferase like protein; TAIR: AT5G46180.1 ornithine-delta-aminotransferase; Swiss-Prot: sp|Q9FNK4|OAT_ARATH Ornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1KRV5|I1KRV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0340700 LjG1.1_chr4 72057336 72066307 -
5 domain predictions
2 GO terms
LotjaGi4g1v0360800.1
n.a. Aminotransferase like protein; TAIR: AT5G46180.1 ornithine-delta-aminotransferase; Swiss-Prot: sp|Q9FNK4|OAT_ARATH Ornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|B1A0U3|B1A0U3_PEA Ornithine aminotransferase; Found in the gene: LotjaGi4g1v0360800 LjG1.1_chr4 73947790 73963488 +
5 domain predictions
2 GO terms
LotjaGi4g1v0401800.1
n.a. Aminotransferase like protein; TAIR: AT4G39660.1 alanine:glyoxylate aminotransferase 2; Swiss-Prot: sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; TrEMBL-Plants: tr|I1KT81|I1KT81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0401800 LjG1.1_chr4 77910090 77914345 -
4 domain predictions
2 GO terms
LotjaGi4g1v0401800.2
n.a. Aminotransferase like protein; TAIR: AT4G39660.1 alanine:glyoxylate aminotransferase 2; Swiss-Prot: sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; TrEMBL-Plants: tr|A0A1J7GAR5|A0A1J7GAR5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0401800 LjG1.1_chr4 77910610 77913569 -
4 domain predictions
2 GO terms
LotjaGi6g1v0106300.1
n.a. Aminotransferase like protein; TAIR: AT2G38400.1 alanine:glyoxylate aminotransferase 3; Swiss-Prot: sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; TrEMBL-Plants: tr|A0A072UX79|A0A072UX79_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0106300 LjG1.1_chr6 23748381 23752412 -
5 domain predictions
2 GO terms