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IPR005814

Description

IPR005814 is a Aminotransferase class-III.

<p>Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped into subfamilies [[cite:PUB00002716]]. One of these, called class-III, includes:</p> <ul><li>Acetylornithine aminotransferase ([ec:2.6.1.11]), which catalyses the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid [[cite:PUB00008007]];</li> <li>Ornithine aminotransferase ([ec:2.6.1.13]), which catalyses the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid [[cite:PUB00085096]];</li> <li>Omega-amino acid--pyruvate aminotransferase ([ec:2.6.1.18]), which catalyses transamination between a variety of omega-amino acids, mono-and diamines, and pyruvate [[cite:PUB00057659]];</li> <li>4-aminobutyrate aminotransferase ([ec:2.6.1.19]) (GABA transaminase), which catalyses the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid [[cite:PUB00085097]];</li> <li>DAPA aminotransferase ([ec:2.6.1.62]), a bacterial enzyme (bioA), which catalyses an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid [[cite:PUB00056810]];</li> <li>2,2-dialkylglycine decarboxylase ([ec:4.1.1.64]), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyses the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide [[cite:PUB00023027]];</li> <li>Glutamate-1-semialdehyde aminotransferase ([ec:5.4.3.8]) (GSA) [[cite:PUB00085098]];</li> <li>Bacillus subtilis aminotransferases yhxA and yodT;</li> <li>Haemophilus influenzae diaminobutyrate--2-oxoglutarate aminotransferase (HI0949) [[cite:PUB00017555]];</li> <li>Caenorhabditis elegans alanine--glyoxylate aminotransferase 2-like (T01B11.2).</li></ul>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

Associated Lotus transcripts 42

Transcript Name Description Predicted domains Domain count
PREDICTED: acetylornithine aminotransferase, mitochondrial-like [Glycine max] gi|356520746|ref|XP_003529021.1| 15
PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| 9
9
PREDICTED: probable ornithine aminotransferase-like, partial [Cucumis sativus] gi|449533799|ref|XP_004173859.1| 9
Ornithine-delta-aminotransferase isoform 1 [Theobroma cacao] gi|508780402|gb|EOY27658.1| 10
10
Ornithine aminotransferase [Glycine max] gi|351727128|ref|NP_001237150.1| 9
Alanine glyoxylate aminotransferase-like protein [Medicago truncatula] gi|357506541|ref|XP_003623559.1| 13
PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cicer arietinum] gi|502130644|ref|XP_004500721.1| 19
PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Glycine max] gi|356507674|ref|XP_003522589.1| 15
PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like [Cicer arietinum] gi|502130644|ref|XP_004500721.1| 14
PREDICTED: acetylornithine aminotransferase, mitochondrial-like [Glycine max] gi|356520746|ref|XP_003529021.1| 15
Pyridoxal phosphate-dependent transferases superfamily protein [Theobroma cacao] gi|508701290|gb|EOX93186.1| 12
PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Cicer arietinum] gi|502144355|ref|XP_004505667.1| 13
Aminotransferase y4uB [Medicago truncatula] gi|357474027|ref|XP_003607298.1| 16
PREDICTED: l-Lysine-8-amino-7-oxononanoate aminotransferase-like [Glycine max] gi|356550752|ref|XP_003543748.1| 18
PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| 15
PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| 15
PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like [Cicer arietinum] gi|502140049|ref|XP_004504034.1| 17
Aminotransferase like protein; TAIR: AT3G08860.1 PYRIMIDINE 4; Swiss-Prot: sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial; TrEMBL-Plants: tr|G7KX17|G7KX17_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi1g1v0452400 14
Glutamate-1-semialdehyde 2,1-aminomutase, putative; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|I1JSD2|I1JSD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 16
Glutamate-1-semialdehyde 2,1-aminomutase; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|A0A1J7G7D4|A0A1J7G7D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 10
Glutamate-1-semialdehyde 2,1-aminomutase; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|G4W9I5|G4W9I5_MEDTR Glutamate 1-semialdehyde aminotransferase; Found in the gene: LotjaGi1g1v0557700 15
Glutamate-1-semialdehyde 2,1-aminomutase, putative; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|I1JSD2|I1JSD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700 16
Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151RD85|A0A151RD85_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0596900 16
Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7L145|K7L145_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070000 16
Aminotransferase like protein; TAIR: AT1G80600.1 HOPW1-1-interacting 1; Swiss-Prot: sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7L145|K7L145_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0070000 16
Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I1LPE4|I1LPE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 19
Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I3SGH8|I3SGH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 13
Aminotransferase; TAIR: AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic; TrEMBL-Plants: tr|I3SGH8|I3SGH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0534100 14
Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 19
ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|K7LWW0|K7LWW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 16
Glutamate-1-semialdehyde-2,1-aminomutase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 19
Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 19
Aminotransferase; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 19
ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 16
ATP-dependent dethiobiotin synthetase BioD; TAIR: AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminase; Swiss-Prot: sp|B0F481|BIODA_ARATH Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1LVT1|I1LVT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0298400 16
Aminotransferase like protein; TAIR: AT5G46180.1 ornithine-delta-aminotransferase; Swiss-Prot: sp|Q9FNK4|OAT_ARATH Ornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|I1KRV5|I1KRV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0340700 17
Aminotransferase like protein; TAIR: AT5G46180.1 ornithine-delta-aminotransferase; Swiss-Prot: sp|Q9FNK4|OAT_ARATH Ornithine aminotransferase, mitochondrial; TrEMBL-Plants: tr|B1A0U3|B1A0U3_PEA Ornithine aminotransferase; Found in the gene: LotjaGi4g1v0360800 17
Aminotransferase like protein; TAIR: AT4G39660.1 alanine:glyoxylate aminotransferase 2; Swiss-Prot: sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; TrEMBL-Plants: tr|I1KT81|I1KT81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0401800 18
Aminotransferase like protein; TAIR: AT4G39660.1 alanine:glyoxylate aminotransferase 2; Swiss-Prot: sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; TrEMBL-Plants: tr|A0A1J7GAR5|A0A1J7GAR5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0401800 12
Aminotransferase like protein; TAIR: AT2G38400.1 alanine:glyoxylate aminotransferase 3; Swiss-Prot: sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; TrEMBL-Plants: tr|A0A072UX79|A0A072UX79_MEDTR Alanine-glyoxylate aminotransferase-like protein; Found in the gene: LotjaGi6g1v0106300 13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00610 CDD 1 2.38