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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0456000 |
| Transcript ID | LotjaGi1g1v0456000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate transporter; TAIR: AT3G54700.1 phosphate transporter 1;7; Swiss-Prot: sp|Q494P0|PHT17_ARATH Probable inorganic phosphate transporter 1-7; TrEMBL-Plants: tr|C3UZD4|C3UZD4_SOYBN Phosphate transporter 2; Found in the gene: LotjaGi1g1v0456000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:95911584..95913161) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAAAGAACAAATCCAGGTGCTAAATGCACTCGATGTGGCCAAAACACAATGGTACCATTTCACTGCAATTATAGT TGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTAGGCCGCATTTACT ACCACGTTGATGGCGCGGCGAAGCCCGGAACATTGCCTCCCAATGTATCAGCAGCTGTAAATGGCGTAGCTTTCTGTGGT ACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGAAAAAAAGTCTATGGCATGACCCTAATGGT GATGGTGATATGTTCTATTGGTTCTGGCCTTTCATTTGGAAATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCC GCTTCTGGCTTGGATTTGGAGTTGGTGGAGACTACCCTCTTTCTGCTACCATAATGTCTGAGTATTCTAATAAGAAGACT CGCGGAGCCTTCATCGCCGCGGTCTTTGCAATGCAGGGTTTTGGAATTCTGGCAGGTGGTATATTTGCTATTATAATTGC TACTGCATTCAAGGCTAAGTTTGATGCTCCGCCTTATGAGGTTGATCCCGTCGGTTCGACCGTTTTGGAAGCGGACTATA TTTGGAGGATAATTGTCATGGTTGGAGCATTGCCAGCTGCATTGACATACTATTGGAGGATGAAGATGCCGGAAACCGCT CGCTATACTGCTCTAGTTGCGAAGAACACAGAACAGGCTGCAAAGGATATGTCTAAGGTTCTTCAGGTTGAGATTGAAGC TGAGCCGAAAAATGATCAAGCACAGGCCAAAGCATTTGGCTTGTTCTCAAAGGAGTTTCTCCGCCGCCACGGGATGCATC TTCTCGGCACAACAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAGAATCTCTTCCAGAAAGACATCTTCAGC GCAATTGGTTGGATCCCTCCAGCAAAAACCATGAATGCCATTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTAT TGCTCTCTGCAGTACTGTTCCTGGCTACTGGTTTACAGTGGCTTTTATAGACAGGATTGGAAGATTTCGTATTCAATTGA TGGGGTTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATA GGTTTCGTGGTGATGTATTCCCTGACTTTCTTCTTCGCGAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGA GATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATTTCGTCCGCAGCCGGGAAGCTCGGGGCTATAGTCGGAGCAT TCGGGTTCTTGTACCTGGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGAGTGAAGAAT TCACTGCTTATGTTGGGCATGGTCAACATTTTAGGATTCTTTTGTACTTTCTTGGTGCCTGAGGGAAAGGGAAAATCTTT GGAGGAAATGTCAGGTGAGAATGAAGAGGAAGGTTGAAATGGAAGGAAGAGTCAGAGT
CDS sequence (LotjaGi1g1v0456000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAAGAACAAATCCAGGTGCTAAATGCACTCGATGTGGCCAAAACACAATGGTACCATTTCACTGCAATTATAGT TGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTAGGCCGCATTTACT ACCACGTTGATGGCGCGGCGAAGCCCGGAACATTGCCTCCCAATGTATCAGCAGCTGTAAATGGCGTAGCTTTCTGTGGT ACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGAAAAAAAGTCTATGGCATGACCCTAATGGT GATGGTGATATGTTCTATTGGTTCTGGCCTTTCATTTGGAAATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCC GCTTCTGGCTTGGATTTGGAGTTGGTGGAGACTACCCTCTTTCTGCTACCATAATGTCTGAGTATTCTAATAAGAAGACT CGCGGAGCCTTCATCGCCGCGGTCTTTGCAATGCAGGGTTTTGGAATTCTGGCAGGTGGTATATTTGCTATTATAATTGC TACTGCATTCAAGGCTAAGTTTGATGCTCCGCCTTATGAGGTTGATCCCGTCGGTTCGACCGTTTTGGAAGCGGACTATA TTTGGAGGATAATTGTCATGGTTGGAGCATTGCCAGCTGCATTGACATACTATTGGAGGATGAAGATGCCGGAAACCGCT CGCTATACTGCTCTAGTTGCGAAGAACACAGAACAGGCTGCAAAGGATATGTCTAAGGTTCTTCAGGTTGAGATTGAAGC TGAGCCGAAAAATGATCAAGCACAGGCCAAAGCATTTGGCTTGTTCTCAAAGGAGTTTCTCCGCCGCCACGGGATGCATC TTCTCGGCACAACAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAGAATCTCTTCCAGAAAGACATCTTCAGC GCAATTGGTTGGATCCCTCCAGCAAAAACCATGAATGCCATTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTAT TGCTCTCTGCAGTACTGTTCCTGGCTACTGGTTTACAGTGGCTTTTATAGACAGGATTGGAAGATTTCGTATTCAATTGA TGGGGTTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATA GGTTTCGTGGTGATGTATTCCCTGACTTTCTTCTTCGCGAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGA GATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATTTCGTCCGCAGCCGGGAAGCTCGGGGCTATAGTCGGAGCAT TCGGGTTCTTGTACCTGTGGAGTGAAGAATTCACTGCTTATGTTGGGCATGGTCAACATTTTAGGATTCTTTTGTACTTT CTTGGTGCCTGA
Protein sequence (LotjaGi1g1v0456000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEQIQVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCG TLSGQLFFGWLGDKMGRKKVYGMTLMVMVICSIGSGLSFGNSPKSVMATLCFFRFWLGFGVGGDYPLSATIMSEYSNKKT RGAFIAAVFAMQGFGILAGGIFAIIIATAFKAKFDAPPYEVDPVGSTVLEADYIWRIIVMVGALPAALTYYWRMKMPETA RYTALVAKNTEQAAKDMSKVLQVEIEAEPKNDQAQAKAFGLFSKEFLRRHGMHLLGTTSTWFLLDIAFYSQNLFQKDIFS AIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFRIQLMGFFFMTVFMFALAIPYDHWTHKENRI GFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLWSEEFTAYVGHGQHFRILLYF LGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 5 | 465 | 461 | 1.3E-280 | – | |
| PANTHER | 5 | 465 | 461 | 1.3E-280 | – | |
| TIGRFAM | 11 | 463 | 453 | 3.9E-210 | ||
| SUPERFAMILY | 12 | 462 | 451 | 9.68E-55 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 49 | 30 | - | – | |
| ProSiteProfiles | 24 | 483 | 460 | 28.902 | ||
| CDD | 25 | 459 | 435 | 0.0 | – | |
| Pfam | 26 | 462 | 437 | 9.9E-44 | ||
| Phobius | 50 | 68 | 19 | - | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Phobius | 69 | 88 | 20 | - | – | |
| Phobius | 89 | 99 | 11 | - | – | |
| Phobius | 100 | 119 | 20 | - | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 120 | 124 | 5 | - | – | |
| Phobius | 125 | 142 | 18 | - | – | |
| TMHMM | 132 | 151 | 20 | - | – | |
| Phobius | 143 | 162 | 20 | - | – | |
| Phobius | 163 | 190 | 28 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 191 | 212 | 22 | - | – | |
| TMHMM | 213 | 232 | 20 | - | – | |
| Phobius | 213 | 232 | 20 | - | – | |
| Phobius | 233 | 345 | 113 | - | – | |
| Phobius | 346 | 363 | 18 | - | – | |
| TMHMM | 346 | 363 | 18 | - | – | |
| Phobius | 364 | 368 | 5 | - | – | |
| Phobius | 369 | 388 | 20 | - | – | |
| TMHMM | 373 | 390 | 18 | - | – | |
| Phobius | 389 | 399 | 11 | - | – | |
| Phobius | 400 | 419 | 20 | - | – | |
| TMHMM | 402 | 424 | 23 | - | – | |
| Phobius | 420 | 438 | 19 | - | – | |
| Phobius | 439 | 460 | 22 | - | – | |
| TMHMM | 439 | 461 | 23 | - | – | |
| Phobius | 461 | 483 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic phosphate transmembrane transporter activity | Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Phosphate ion transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0456000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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