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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0459100 |
| Transcript ID | LotjaGi1g1v0459100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 4-hydroxybenzoate octaprenyltransferase; TAIR: AT4G23660.1 polyprenyltransferase 1; Swiss-Prot: sp|Q93YP7|COQ2_ARATH 4-hydroxybenzoate polyprenyltransferase, mitochondrial; TrEMBL-Plants: tr|B9H5T2|B9H5T2_POPTR 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Found in the gene: LotjaGi1g1v0459100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96259126..96263788) extracted from Lotus japonicus Gifu genome v1.2.
GGTCAATTGCCTTAGCTGCACCCCCTGGTCACCTTCCTGATTTTAAAATGTTGACTCTGTTTGGATGTGGAGCATTGCTT TTAAGAGGAGCTGGGTGTACTATAAATGATCTGCTTGATCGGGATATTGATACAAAGGTCAGTACGGTTGTCTTTTCTTT CTCTTTTTTGTAAAGGATCACAGGCATCCTTCATAGAAAACAAACCTGCTTGAGTCGACAATGACCACTACGGGCCTTTG TCAATCTGTAGCTGCCTTTTCTTTTTGTTGCAGTGTTTTTTTGGCAACAAAAGATGCCGAAATAGTAATGTGTGTTGTAA ATTAGTATAAGAGATCATGATCTGAAGCTAATTTAATAGATATTGATAGAAAAATGATCTGAAAGCTAAGTCATGCCAAG ACTAGTGCTTTAAGATTTCATATGGTCTGTAAGTTCATCTTTATTTTCTTTAATTTAGATGGACAACTTGCTTATCATGT TGCTTGTATCCTGATTTTTTCCTGTCTTCTAGTAGGATTTTTTGTCTTCCTTTCTTTCTACTTAACATTAATATCATCCT ATTATTGAACTTATATTGCGTTTTAAAAAATGCCTTTGCTAGATTGTGCATTTGAGGGTCTAAGTGACGGATAAGAGAGG ACTAGATTCAGGTTGAATAAAACGGCCTAATAGATATAATTTTCATACCGTAAAATATGCTAGAACAAGTAACTTATAGG CATGGTTATAGATGATGAAAGCCCTCTATTACATTAACTCAATATTTCCCATCCATTAGGATAACACCGGAGACATTGGT TGGTGTCTTATTTAATTTAATTTTATTGCTATACGGTATAACCCTTGTGATATTTTTTTGACTGAAGCACTTTATGTTTA TTGAGCATATGATTGAGGTTAATGTCACACTTCTTCCCTTGACTTTTTCAGAAATAATGCAGGTAGAACGTACAAAGTCA AGACCTGTGGCAAGTGGTCTTTTGACCCCATTTCAAGGACTCTCTTTTCTTGGATTTCAATTGCTTTTGGGTCTTGGAAT ACTTTTGCAACTAAATAATTATAGGTTAGTAAATTTGAATTGCCAAAATGGGTCTATGCGTATTATGTTGGGACGTAGAC GATTGAATATGTAATATCTTGATTAGCTAAGAAGAAGATATCGCCTTTCTTGATCCATAATCTGTGGTGCATGTCCTTCA TTATGGTAGTCTGATCCTGATCACAAAAGCTGGCAAATACCATATTATTTTGATATTTAATAAGATTAAAGACTGTATAG AGTTTCTGAAACTAATTTACCTAGATTGTTCCCTTCAAGAGACCTTGAAAATATTAAATAATGGGAGGAAAGTAGGTTAA AATGATATGCACAGAATGTGAAAAATAATCTCTTTTGAACTTCTGGCACGTAGAGCAGGTAACTGTTTCTTTATTACCAA GACTGTTTATTAAAGTAGCTTAGCAGTTGCGTCTCCTGCATATTAGCCTCTACTGCATATTAGTGTTAGTCATTATCGAA ATTGATTCAATTGCACAAGGAAGACATATCACTGGCTATGTCCACTACCAAACCCTATCTAAGAAAGAAGATAAAGCGTT TCTATGAAGTATTTAATTATTTATCCTGCTAAACTGAAAACATTGTTGTTTTCAGGACAAAGACTGATCCCTTTCTTCAA AAAAGAGTTTTGCTTCAAGTAACTTGCGATTGCTATGCATCCCTATATTTTAGTGTGCATGTTGTCATTATCTCATTTGC AGGCATATTTAAATTGAGATGAAGTGTGAATGAATGAATCTTGCTAAGATTTCTAATATTTTTTTGGCTTGCATACCACA GCCGTGTTTTGGGTGCTTCGTCCTTGTTTCTCGTCTTCTCCTATCCCCTCATGAAGAGGTTTACATTTTGGGTAATGATT TTCCTCATTTCTAATTTCTTCTGACTGGTTTTGTTTTTGTTATTACCTTTGATGCATAATCTCATTATGATTTTATATGG TGCTCTGATGCTATATTGGTTAGCCTCAAGCCTATCTAGGGTTGACCTTTAATTGGGGGGCTTTGTTAGGATGGGCAGCA ATTAGAGGAAGTCTGGATCCATCTATCGTGCTGCCACTTTATGCCTCTGGAGTTTTTTGGACCCTTGTGTATGATACTAT TTATGCACATCAGGTAAAAACAGCATTTCTTCTTGAAAGATGTAAGCCCTGTGATTTTGCTCCTCTGTTCTGTCTTTTCA TTGTTTCTTATTGGCTTAGTGTCTGGGATCTGGTAAGAAGAGGGCTTTACGGGGTTTTTGCTTCTTATTACTGCACTTCT TCATGTTGATGGGCTTAAAATGCTCTCCTTCAGATATGGGGGGTGTTGAAGTAATGATATGATTTGCATTTCAACCATGT TCAGACGATTATATTGTCTCTAACAGTTTAGGTGTTATGGAACAAAGAATACAATGACAAGACTGCTTGGTATTGTTCAC ATGAATAAAGCAGTGTAATCAAAATTCTTGTACTGTCTAATGATGTTTTCTAACTTTGGCATGCAGGATAAAGAAGATGA CCTGAAAGTGGGAGTTAAATCAACAGCTTTACGCTTTGGTGATTTGACAAAGCAATGGATTACTGGTTTTGGGTTTGCAT GCCTTGGTAATCTTGCTCTCAGTGGTTTTAATGCTGAACTAGGTATCTTTTTATAAATATCATCCTGTTCTCTTTTTTCA TGACTATTTGGGTTACAATGATGGTTTTTTTTTGACCTCCTGATTCATATGACTGGAGCAGGTTGGCCATATTATGCATG TCTGGCAGCTGCATCCGGACACTTGGGCTGGCAAGTATGGACAGTTGACCTTTCATCGCGTGCTGATTGCAATAGGAAGT ATGTTTGGCAGGATTTTGTGCATATGTTAATGATTTAATTATCCAAAAGCCCATCTTCTGATAGGATCTCAAACATTACT TTATTGGCTTGAACATCAGCTGGAGTGTCATAATGTTTTTATTTTTCTAATGGCCATGCCATGAAAAAGCAAATTTGAGA TTATCATAAACTTTTTCAAAATTCAATTTCAGTTTTTTAAAAACTTAATTTTATGACTTTGCTACTAAGACTTGATGGCA TATTTAGTTTTATGTCCTCAGAGCTCAACATAGGAAACCCTCCAAAATGTAGTGTTTGCTCTATTTTTCTGTTAGTTACT TTTCAGGCGTTTTAATGTGGATTGCAATATGGTAAAAAGCTTCTGATGTATTGATTAGCTTAATTACAATATAAAGTTCA TTTCAATTCTCTTAAAATTAAACATGATGACCTGATTTTTGTACCTTTTTTTCCCCCATCTCTTCAGATTTGTCTCAAAT AAGTGGTTTGGAGCTATCATATTTGGTGGGATCCTTGCTGGGAGGCTTTCATCATAGTGGTAAATTTTGCCTATAATATA GTAATAACAAATCAAACATTGTGCGCATTCCAAATATGACCTTCCTAGGACAATCTGATTACATCTTTGTACACTTCTGT ACATTTCTCTTCTATACCATGTTTTAAAAGACCACTTCGTATTACATGTTTGAACATGTTCTAATATCATTAGTTTTATC AAAATCTAGTTTCCGTGCTAGTCAACTAACTCTTTGACACACTTTTTTACTTTTAATCACACTTCTTAGTATATGAGGAA AGTATGATGTCGCAAGATTACCCCACCTAGTGGGAAAGTACTTGGTTGTTGTTATTGTTTTATTATTGAGTAATTTTTAT GTGGATCCCCTTAATTTTTAGTGAAACTCGTTAATTTTTCTCAATAATAAAGCGCGTGTTAGAAAGCATGTGTCATAGCG GATGTTAATGTTAGTATTCCTGTAATTAAACTCGAAGGTTGAAGCTAATGGAGGCACTTATGTGTCATAGTATGTCAATG GCAATTTGTTGTAGGGCTAACTAGTTGATTGACTTGATTAACTAGTTACTAAATATTTTTCTTCATTATATCTGCAGAAG GCACTGTGAGCTTACATGAATAAGACTTGAAAGAAGTAGATGATTGTCTTTTGGTGTGCAAAACCTGGACACTGCATCTC CTTAGACTTGAGGTTGTGACTTGTGACCAAGAAATCAACAGGGAACCTGCCCAGTTTGAATTACGAGAAAATACTCTGCG AGTGGGAGATGCCAATGCACAGTAGCTGCCATTTGAAGGTTCAAACTATGGAGTCAGTGAATGTTCAGGGGCGGAGTATA GAGTATTGATAGGTGCCCTTAGTTAATTAGTTATTTACTTAGTTGTGATAGTTTTAGTTAGTTTGAGAGAGTGAGAGAAT GTTATAAATAAGAGACTTAGAGAGAAATAACATCTTTAGGGTCATTGGGAATTGGGAGAGGCCATGCTCTCTCGAATAAC CTGTAAATTCTTAGTGTTACTTCAGTTTACTTTCTTCTTTAATGGCTGGTACCTATCAATTAGTCCACTCGGGTCTGGAC GAGTAAAAGGGCATCATATTTGTTACATGATGACTTTCATATTGATTATTGGCAGTACATGGGGTATTTTCCATGTAAGA AAAATCAGACACATTGAAAAACTTGTAATACAATTCAAGAACAAGATTGAAAATGAAAGTTGCTACAAAGATTCGTTTCT CTGTGTTGACAATAGAATAAAGC
CDS sequence (LotjaGi1g1v0459100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGTAGAACGTACAAAGTCAAGACCTGTGGCAAGTGGTCTTTTGACCCCATTTCAAGGACTCTCTTTTCTTGGATT TCAATTGCTTTTGGGTCTTGGAATACTTTTGCAACTAAATAATTATAGCCGTGTTTTGGGTGCTTCGTCCTTGTTTCTCG TCTTCTCCTATCCCCTCATGAAGAGGTTTACATTTTGGCCTCAAGCCTATCTAGGGTTGACCTTTAATTGGGGGGCTTTG TTAGGATGGGCAGCAATTAGAGGAAGTCTGGATCCATCTATCGTGCTGCCACTTTATGCCTCTGGAGTTTTTTGGACCCT TGTGTATGATACTATTTATGCACATCAGGATAAAGAAGATGACCTGAAAGTGGGAGTTAAATCAACAGCTTTACGCTTTG GTGATTTGACAAAGCAATGGATTACTGGTTTTGGGTTTGCATGCCTTGGTAATCTTGCTCTCAGTGGTTTTAATGCTGAA CTAGGTTGGCCATATTATGCATGTCTGGCAGCTGCATCCGGACACTTGGGCTGGCAAGTATGGACAGTTGACCTTTCATC GCGTGCTGATTGCAATAGGAAATTTGTCTCAAATAAGTGGTTTGGAGCTATCATATTTGGTGGGATCCTTGCTGGGAGGC TTTCATCATAG
Protein sequence (LotjaGi1g1v0459100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQVERTKSRPVASGLLTPFQGLSFLGFQLLLGLGILLQLNNYSRVLGASSLFLVFSYPLMKRFTFWPQAYLGLTFNWGAL LGWAAIRGSLDPSIVLPLYASGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDLTKQWITGFGFACLGNLALSGFNAE LGWPYYACLAAASGHLGWQVWTVDLSSRADCNRKFVSNKWFGAIIFGGILAGRLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 95 | 95 | 7.2E-28 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 2 | 215 | 214 | 8.4E-114 | ||
| PANTHER | 2 | 215 | 214 | 8.4E-114 | – | |
| Pfam | 2 | 195 | 194 | 1.1E-42 | ||
| CDD | 2 | 212 | 211 | 2.77439E-78 | – | |
| Phobius | 12 | 36 | 25 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 37 | 41 | 5 | - | – | |
| Phobius | 42 | 60 | 19 | - | – | |
| Phobius | 61 | 68 | 8 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 69 | 86 | 18 | - | – | |
| Phobius | 87 | 97 | 11 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Gene3D | 96 | 215 | 120 | 1.3E-12 | – | |
| Phobius | 98 | 115 | 18 | - | – | |
| Phobius | 116 | 135 | 20 | - | – | |
| Phobius | 136 | 157 | 22 | - | – | |
| Phobius | 158 | 162 | 5 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 163 | 183 | 21 | - | – | |
| Phobius | 184 | 194 | 11 | - | – | |
| Phobius | 195 | 214 | 20 | - | – | |
| TMHMM | 195 | 214 | 20 | - | – | |
| Phobius | 215 | 216 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0459100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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