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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0459200 |
| Transcript ID | LotjaGi1g1v0459200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G08570.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9C9Z7|Y3857_ARATH BTB/POZ domain-containing protein At3g08570; TrEMBL-Plants: tr|A0A0B2S5U1|A0A0B2S5U1_GLYSO BTB/POZ domain-containing protein; Found in the gene: LotjaGi1g1v0459200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96264301..96268037) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGATGGTTTTGGCTATACACACATCACATATTGTATGAAAACGAAAAGAAAAAGTTGTGTTGTTGTTTGGGTGTGTG CCATGGCATTTGTGAATATTTGATAGCTTTGTTGAGGGCTTTTTGGGGTGTTCACTTCACAATATTCCTGAAAACCTGCA ATCTTTCTTTCGTACACATTATTTGATAGTTTAATCATCCTCAGCCACAGGGTCACAATTTGTGTTGCTGTTACAGAAAC ATACACAACACATTGAAAGAAAGAAAGAAAAATGGTTTCTGAGAACTCTCTTTCTTCTTCTAAACGCTCTCCAGCTACTC CTAACTTCTCCAACTCATTCACTACAAGGTACTAATTAATACCTTCATTGATCTTTTTGCTTCCTAGTTCTCTCTGACTG TGTTGTTTTTTGTCTAGTAAGAGTGTGATATACTTGTCTCTTTTTATTTCTTTTGATGGTGGATTAAGAATGTAGTTTCA TGTGTTTGTTTTGTTAGAGCTCATTTCATTCAAGTTTTATCTTACATGGGGTTAGAGTTATAGTTATATAGTACCTTTTT CTAGATTGTGCATTTGATAACTTGGTTAGCCAGTTTCATCTGGATTTTGTGAATAAAGGCTATAGTCTATACCATTACAT AGTAATCTTGAAAGATAAAGGTTATAGTATGTTTGAAAATTCTTCTGCAGTTGATTCTATAGCCAAAATCAGTTCTAGAA GGAAAGAAGCTTATGGGAGTAGTTTCTAGGTGACTCTGAGGAAAAATAAGCTAATTCAAACATATATTAATGTACAGAAC ATGTTTGATTGTTAGATATTTGGAGTTATTAAGGTAGAGAGAGTTATCTAAATTCTTGGGAGAATAGTAGAATTGCAGGT TTAAAGACAATTGTCATGCCATATTGATCTTTTTTTTATGGCAGGATTTTTGCTGATGTTGCTGGTGACATTACGATTGT TGTTGATGGGGAATCATTTCTGCTGCACAAGGTAAATCTTTGAAGATGTGGTTTACAGACTACTTGACAAATTCATGAGC TTGTTCTGTTATACTAGTTTCTATGAATTGGGATATTATGAATACTTTATGTGAATCCATAACATGTTAGCATGGACTAA AATTTACCACTGGTTTTCCAAAAGTAATGCCTGCTTTAGAAATCAAAGGGAAAAGCTCATGACTCTATTTGGCTTCTTTT GAGTACACATTAGCTTCCCCCATTATATCTGTGAGCATCACTGTAAATAAGCGTTAGTCCTCACTTCAAGACAAAAAACG GATGAAGCTTTTCTTGTTGATTGAGATGAAAATTCGTTTACATTGCAGACAACTAGTAACCAAACACACTCAGATGATGT CTTAAATTGACCAAAACAGTTCCTTTGAACTCAAAATCTTTAAAAACTTACTTTTTCCTTGTTTTCATGAAGTTTCCCTT GGTGACCCTGAGTGGGAAGATCAGGAAGATGGTTGCTGAAGCCAAAGGCTCCAATCTTTCGAACTTGGAGCTCCTCAACT TTCCAGGGGGATACCAGACATTTGAACTCGCCATGAAGTTCTGTTATGGGATGAATTTCGAGATCACAACATTCAATGTC GCGAGGCTACGTTGCGCAGCTGAGTACCTGGAAATGACAGAAGAATACCGGGAGCGAAACCTTGTCACAAGAACAGATAC TTATCTCAATGAGATTGTCTTTCAAAGTCTTCAGAAGTCAGTGGAAGTATTATCCACCTGTGAGATGCTACCTCCAGACA TGGTGGACGAGATTAGAATATCAAAAGGGTGTGTAGAAGCCATTGCAATGAATGCATGCAAGGAGCAACTAGCTTCTGGT TTATCTAAATTAGATTGTGATGGTGAATCTAAAGAACTAAAGGAAGGTTGTGTTGCATGGTGGGTTGAAGATCTCTCAGT GTTGAGTATTGACTTCTTCCAGAGAGTTATAAGTGCTATGGGAAGAATGGGAGTTGGATCAGATAACATTATTTCTTCAC TGATTCATTATGCTGAATCATCACTGAAGGGTATTGGGAAGAGTCAATTTTGGAACCCATCAAGGACAAATTCAAGTCCA ACCAATGGAGAAAAGGATCAAAGGACAATTGTGGAAACTCTTGTGAGTCTCATGCCAACAGACAAAAGCTCTTCCATTCC ATTGACCTTTTTATTTGGTATGTTGAAGATGGCTATCATGTTAGGTGCAACCATTTCTTGTAAGCTTGAGCTTGAAAGGA GGATAGCATTAAGGTTGGAAATGGTTTCACTTGATGATCTTCTTATACCATCTCTGCAGAGTGGGGATTCCTTGTTTGAT GTCGATACAGTTCACAGGCTGCTGGTGAATTTCTTGCAGAGGATTGATGAGGAAGAAAGTGAAGATTATGGATATGAATC TGATGAGGTTGGTTCTAATTGCCATGGTTCTCTGCTAAAAGTGGGGCAGCTTATGGATGCTTATTTAGCAGAAATTGCTC CTGATCCTTGCTTAAGTCTACCGAAATTCATTGCTTTGATAGAGGCACTTCCTGATTATGCTCGTGTCATTGACGATGGC CTTTATAGAGCAATCGACATTTATTTGAAGGTAAATTTGCTTCAACTAAAGAGAAAATCCTTGTCTGATTCTAATAGTTA TAGCATGTTTGGATCAACTTCTCTCTCATCAGAAACAGTTCTACTACTCAGATCCCCAGAATTGATTTTGACTTCAAAAT TAATTATAGAAGGGTTTCCAAACACGCACTTAAGCAAATTCTAGTCAAACTTCATTCTTGATCATGCAACAGTTACACTT ACAAGAATTAGTATTAGCAGGTTTCTCATGAAAAACGTGGTTCGAGTAGTAACCCCCTAAAACTAATCAGTTGAGTGTGT TTGTTATTCATTTTTCCTTCTTCATGTTGACAAAACACAACACCTCTTTTTGTTCAGGCACATACAACATTGACAGAACA AGAATGCAAGAAGCTTTGCAAGTTTATAGACTGCCAGAAGCTGTCTCAAGAAGCATGCAACCATGCTGCCCAGAACGACC GGCTTCCAGTGCAGATGGTGGTGCAAGTCCTGTATGTTGAGCAGCTGCGTTTGAAAAATGCACTGTCAGGAAGTTCAGGA GATGGGCTGCTATCACAGAGAATAAGCAGCGGTGTTCCAAGCGCTGCCATGTCGCCGAGAGATAACTACGCTTCTCTGCG GCGGGAGAACAGAGAGCTGAAGCTAGAGATTTCGAGATTGAGGGTGAGGCTGAGCGAGTTGGAGAAGGAGCAGATGTTCA TGAAACAAGGCATGATTGATAAGGCGGGAAATGGAAGAACATTCTTAACCTCTATTTCTAAGGGGATAGGGAGAATTGCC ATGTTTAGCAGTCAAGGTGGAGGTAAACGCCAGAAATCGGTTAGGAAGTCTAGGGAGGGTAAAACTGGGAGGAGTAGGAG ATACTCTGTCTCATAGATAGTGCTCTTCTTCTTCTTCTAAATTTAGCTTTTAGAGAACCCTCTATTACCTTTTCAGGTTA TCACAACTTGTAAATGAATTGGTCAAAAGTTTCCCTTAATCTTTAGTCCTAGTCTTACGGTTGAACTTCAATACTTCCCT CTTCTTCTACCCCACTATATCCAATTCTGGTTGCCAAGCAAAGGTCTTAGACACGGACACTACTTATTGCAAGCCACTAA TCAAACACCATTTTTCAAGATATGTAAATTTGGACCACAAAACAAAAAGATACGTAG
CDS sequence (LotjaGi1g1v0459200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCTGAGAACTCTCTTTCTTCTTCTAAACGCTCTCCAGCTACTCCTAACTTCTCCAACTCATTCACTACAAGGAT TTTTGCTGATGTTGCTGGTGACATTACGATTGTTGTTGATGGGGAATCATTTCTGCTGCACAAGTTTCCCTTGGTGACCC TGAGTGGGAAGATCAGGAAGATGGTTGCTGAAGCCAAAGGCTCCAATCTTTCGAACTTGGAGCTCCTCAACTTTCCAGGG GGATACCAGACATTTGAACTCGCCATGAAGTTCTGTTATGGGATGAATTTCGAGATCACAACATTCAATGTCGCGAGGCT ACGTTGCGCAGCTGAGTACCTGGAAATGACAGAAGAATACCGGGAGCGAAACCTTGTCACAAGAACAGATACTTATCTCA ATGAGATTGTCTTTCAAAGTCTTCAGAAGTCAGTGGAAGTATTATCCACCTGTGAGATGCTACCTCCAGACATGGTGGAC GAGATTAGAATATCAAAAGGGTGTGTAGAAGCCATTGCAATGAATGCATGCAAGGAGCAACTAGCTTCTGGTTTATCTAA ATTAGATTGTGATGGTGAATCTAAAGAACTAAAGGAAGGTTGTGTTGCATGGTGGGTTGAAGATCTCTCAGTGTTGAGTA TTGACTTCTTCCAGAGAGTTATAAGTGCTATGGGAAGAATGGGAGTTGGATCAGATAACATTATTTCTTCACTGATTCAT TATGCTGAATCATCACTGAAGGGTATTGGGAAGAGTCAATTTTGGAACCCATCAAGGACAAATTCAAGTCCAACCAATGG AGAAAAGGATCAAAGGACAATTGTGGAAACTCTTGTGAGTCTCATGCCAACAGACAAAAGCTCTTCCATTCCATTGACCT TTTTATTTGGTATGTTGAAGATGGCTATCATGTTAGGTGCAACCATTTCTTGTAAGCTTGAGCTTGAAAGGAGGATAGCA TTAAGGTTGGAAATGGTTTCACTTGATGATCTTCTTATACCATCTCTGCAGAGTGGGGATTCCTTGTTTGATGTCGATAC AGTTCACAGGCTGCTGGTGAATTTCTTGCAGAGGATTGATGAGGAAGAAAGTGAAGATTATGGATATGAATCTGATGAGG TTGGTTCTAATTGCCATGGTTCTCTGCTAAAAGTGGGGCAGCTTATGGATGCTTATTTAGCAGAAATTGCTCCTGATCCT TGCTTAAGTCTACCGAAATTCATTGCTTTGATAGAGGCACTTCCTGATTATGCTCGTGTCATTGACGATGGCCTTTATAG AGCAATCGACATTTATTTGAAGGCACATACAACATTGACAGAACAAGAATGCAAGAAGCTTTGCAAGTTTATAGACTGCC AGAAGCTGTCTCAAGAAGCATGCAACCATGCTGCCCAGAACGACCGGCTTCCAGTGCAGATGGTGGTGCAAGTCCTGTAT GTTGAGCAGCTGCGTTTGAAAAATGCACTGTCAGGAAGTTCAGGAGATGGGCTGCTATCACAGAGAATAAGCAGCGGTGT TCCAAGCGCTGCCATGTCGCCGAGAGATAACTACGCTTCTCTGCGGCGGGAGAACAGAGAGCTGAAGCTAGAGATTTCGA GATTGAGGGTGAGGCTGAGCGAGTTGGAGAAGGAGCAGATGTTCATGAAACAAGGCATGATTGATAAGGCGGGAAATGGA AGAACATTCTTAACCTCTATTTCTAAGGGGATAGGGAGAATTGCCATGTTTAGCAGTCAAGGTGGAGGTAAACGCCAGAA ATCGGTTAGGAAGTCTAGGGAGGGTAAAACTGGGAGGAGTAGGAGATACTCTGTCTCATAG
Protein sequence (LotjaGi1g1v0459200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSENSLSSSKRSPATPNFSNSFTTRIFADVAGDITIVVDGESFLLHKFPLVTLSGKIRKMVAEAKGSNLSNLELLNFPG GYQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRERNLVTRTDTYLNEIVFQSLQKSVEVLSTCEMLPPDMVD EIRISKGCVEAIAMNACKEQLASGLSKLDCDGESKELKEGCVAWWVEDLSVLSIDFFQRVISAMGRMGVGSDNIISSLIH YAESSLKGIGKSQFWNPSRTNSSPTNGEKDQRTIVETLVSLMPTDKSSSIPLTFLFGMLKMAIMLGATISCKLELERRIA LRLEMVSLDDLLIPSLQSGDSLFDVDTVHRLLVNFLQRIDEEESEDYGYESDEVGSNCHGSLLKVGQLMDAYLAEIAPDP CLSLPKFIALIEALPDYARVIDDGLYRAIDIYLKAHTTLTEQECKKLCKFIDCQKLSQEACNHAAQNDRLPVQMVVQVLY VEQLRLKNALSGSSGDGLLSQRISSGVPSAAMSPRDNYASLRRENRELKLEISRLRVRLSELEKEQMFMKQGMIDKAGNG RTFLTSISKGIGRIAMFSSQGGGKRQKSVRKSREGKTGRSRRYSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 291 | 291 | - | – | |
| PANTHER | 2 | 601 | 600 | 0.0 | – | |
| PANTHER | 2 | 601 | 600 | 0.0 | ||
| SUPERFAMILY | 18 | 118 | 101 | 6.04E-15 | ||
| Gene3D | 26 | 148 | 123 | 1.9E-8 | – | |
| CDD | 30 | 128 | 99 | 4.44989E-34 | – | |
| SMART | 33 | 125 | 93 | 0.0034 | ||
| ProSiteProfiles | 33 | 101 | 69 | 10.572 | ||
| Pfam | 34 | 117 | 84 | 1.2E-5 | ||
| ProSiteProfiles | 203 | 485 | 283 | 89.07 | ||
| Pfam | 204 | 461 | 258 | 1.4E-89 | ||
| Phobius | 292 | 315 | 24 | - | – | |
| Phobius | 316 | 606 | 291 | - | – | |
| Coils | 518 | 545 | 28 | - | – | |
| MobiDBLite | 578 | 606 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0459200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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