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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0459700 |
| Transcript ID | LotjaGi1g1v0459700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc transporter; TAIR: AT3G08650.2 ZIP metal ion transporter family; Swiss-Prot: sp|Q9C9Z1|ZTP50_ARATH Putative zinc transporter At3g08650; TrEMBL-Plants: tr|G7KY80|G7KY80_MEDTR ZIP metal ion transporter family protein; Found in the gene: LotjaGi1g1v0459700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96312379..96317230) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTGCACATGGCTCCAAATCTGAAGCTAAGGTTATGTGTTCCTTTGATGTTGTTTTTAGTGTTAAGTTTTGTTCTCTT CGGCATTTCGAATGCTGAATTGGAACAACAAGTTTTACATAAGGTTAGAGTTGCTCCGCATAAGGATGTAGGATCCAATG TAATTGGTGGTGCTGGTTTAGAGAATTCCTTTAAGATTGAGAATGCCAATAATTTGAAGGGTGGAAGCAGTAAAGTTTCG GTTTCGACGGTTGCATTGTTTACATTGGCAATGGCAGCTGCCACTGGTTTAGGTGCTGTGCCTTTCTTCTTTGTGGAGCT TGATCCACAATGGGCTGGGCTATGCAATGGAATGGCTGCAGGTGTCATGTTGGCTGCAAGCTTTGATCTAATACAGGAAG GGCAGGAATATGGTGCTGGAAGTTGGGTTGTAACTGGGATTCTAGCTGGTGGAATCTTTATTTTGCTATGTAAGAAGGTG ATGATTTTTCTTCCTCTTACCTTCCTCCTTATTGAAGTTACTTGCCTGGCATTGCTGTTTTCTTCAGCAGGGCTTCTATG TAAATGATAAATGTCTTGTTCTTCAATGTTGTTTAGCTTAGACACTAAACTATTGATGAGTAAGCTTCGCCTCCAGAGCA ATTATTTTTGAAATATAAGTCAAAATTGACAAAGGGTTTTCTTGTTCACATCTCTTGTACAACTTGTCTATATTGATTTC TCAGTGAATTTTCCATCCAACCTACTTAATAAATGTCAGAAAATTTGATGAATTGATCATTTACCAGAACTATATCATTA GTAGTTCTCCCCCCCCCCCCCCCATGATGTAATTTTGTTGCATAAATCCTTAAATTTTGCTTATAGAATGTTCTCATTTA TGTCTTTCATGATCTCTTGGGTTTCAGTTTCTTGAGCAGTACGGAGAAGTAAGCATGTTGGATATAAAAGGTGCTGATGC AACCAAAGTTGTTCTTGTTATTGGAATAATGACTCTCCATTCTTTTGGGGAGGGATCTGGGGTTGGAGTCTCCTTTGCTG GCTCGAAGGGTTTCTCTCAAGGCCTGCTGGTAACTTTGGCTATTGCTGTACACAACATACCAGAGGGATTAGCTGTGAGC ATGGTACTGGCATCAAGGGGAGTCTCTCCACAGAATGCTATGTTATGGAGCATAATTACATCTTTACCTCAGGTACATCT TAACTTAAGAATTTAATTATCTTACTTTGTCAAGGAAAAAATTTATTTTTACTTCCATCAGCATATGACTGAAGATTTTC TCTTCTGAATCATATACTAAATCTTTGCTGTCCCATCAGACAGTCATTGTGATAGACCTATCATAAAATGGTTTTATGTT AGAAGAAGGAAAAAGGGGCCGGAAGCTAGCAAGGCCCAATAGGGTCAGTTGGGGGCTGTTAGAGAATTGGCTAGATTGAA CGAGTAATCTTTAAATAGTTAGTTAGAGGGACCACTACTTGTACAAGGGTAATATATTTTTGGGTTTAGGCTAAGAATTG GAAGGAAGTCAAGGAGAGTCAAGGTTGTCAGCATTTCTCTGGACATTGTATCAACATTCACTCACATGGAGTCCATAATA TTCCATACCTGAAACTTGTTTCATTCATTGAAGATAATTATTTTTTTCTGTACCAGCATAACACATTTTAAGCTTCATTC TCACATTATTTGTATGAATAAGATATGATTGGGTAGATTTTGGCCGTTTGACTCTGTTTAGGTATATTTCACTCCAGTTC AGGTGAACTGTGGTGTAATATGTTGCATGATATGATGAACCAACTATCCCAAAAGCTTAAGATCTTGGGTGAAGACACAT GAATAGTTTTATGTTATATTTCTAACACGTCCCTCACGCAAGAACCAACTATGCTTGAAATTCCATTTTTTATCAGGATA GTAGGGGCAATGCACAAACCACTTGGTCATAGAAGCTTTGATACCATGTCATGAGCCAACTATCCCAAAATCTTAAGCTG TAGTGTTGGGTGAAGACTCATAGATAGTTTTATATTATATATCTAACACATTATTAGCCCAGTTGGTTCTGTATTTTATT TACTCCACCTTATGTGGTTGTCCTTTTCACTAATTGGTATGCCATCCTTCCTAAGGTGACTACTTTGTCGTTATACCACA TAGACCATCAAAGATTTGGTAGGTCCTTTAAGTTCTCAATATTCCTCAATTTAATGGAATATCATACATTCTGAAATTGC TTTTCCATGGTGTCAAGTTGCATGCCAGTCAATACATCTAAAGGTTGACTACACCTAATATAGGTTGCTTTAATGGTGGA TGAAATATTTTCTTCTTGCTAGTGTAGAATAATTAAGACTTTTCATAGGTTCATGTTGCTGTTATTCTGCTTACACTAGT AATACTGGCCTAGACTCACTTCTAAATCCTGGGTTTTAGTATCAGTATGTTTCTTTTGTTGAATTCAGCAAATGAAAAGT AAGCATATTGAAGGATAACAATTTTTAGTCCAATGCAGTTAATTTGTTTAAGGCTTTAAGCTATTCATTGCTGTCTTTAA CTGTAGCATCTCACCATCTTATTCTTAATGTTAATGCAGCCTATAGTTGCTGTTCCTTCATTTATGTGTGCTGATGCATT CAGCAAGTTCCTTCCTTTCTGTACGGGATTTGCAGCTGGATGCATGATTTGGATGGTTGTTGCAGAAGTGCTTCCTGATG CATTCAAGGTTATTTTCCAATATAATGTTACATAAAGATATTCTGATATTTTCATTTTCTACAACATTTTAATTTTTAAA TACACGAACATAAACATGACAATAGGGCTGGACGAGGGTGTGTTCCATTTTTAAATAAGATGGAACTGAACAATACATGA TAAAATGTGTTCCATTTCATTCCATCCAATATTCCACTTTGTCTCCATTCCATTGTATAATTATCTAAACAGTGGAATGA GAACATCATTCCATTTGATTCCGTAGTTTCATTCCTTTCCGTCCCATTCCATTTCATTCAATTCTGCATTAAATACCCAA ACATCAGTCATAAGCTCAACTTATCGTGTCCAGGTTTGAGGAGGGTATTCATATTTCAAAACCTGTTCTCACCCCATCAT TTACATATAATGGAAAACCCAACAACATACATGGTCAAATTAGGTTTTCTCATTAAAGATAGGGCGGGTATCCGTTGCTA GTTGCAACAGTTTTCTTCTTCTGCCATGCCTACTTCAACATTAGCTTTTCATATCTGTACTTATTTAGATGACATGGGCC AATCTGAAAAGGAGTAGTATTGGGTCAACCCTCCCTAATAAGCGTTATAATAACAAAAATACTATTCTCGAAAGGGGGGG GGGGGGGGGGGAGGGCTTCTGTAAAGGATGGTTGGAATGTTATCTTAGTTTTTTTTGCTTTTACACATGAACACGCACAT GATGTAGAGTAATATTCCAAGGGTGCTCCTCTTAGTACAATATTCTCCTGAAAAATATAAACTACTCGTTTAGGTTGCAA AGTGTTAATCCCCTTCAAAATCAGCACAGCCTCAATTAGACACTGAACTATATAACCCAAAGTTAATGAAAATCCTAAAC TAAATAAAACTCTAGCTGAATCCTAATTGGATACATAATTTTAATAACATTCAAATTTTCTAAAACTAGATATTTACCAA AAGATAAATTGGCTAAAAATAAAGATATATATCCTAATCTACATCAGGAATATTAAATTCTCTTTCTTTTGGATTGTAGG AAGCCTCAGCTTCTCAGGTAGCCTCAGCTACTACCATTTCTGTAGCATTTATGGAAGCTCTTAGCACCTTCTTTCAGAAT TTCAGTCATGATTACAGGTAAATTTGTATAAATTGTATTCTGGTATCAGCTATATTTTGTTGTTTTGGTTTTTTTCTTGG GTGAACAGTATTAATCATCCCTGCTCTGTCAGCTAAATTTTGTAATTAATACATAATTTCTTCTACTACCATTTCTTCTG TTGTTTTTTTCTCCTGAATTGTGATTTCTTTGTTACAGCTCTGAGGATGCTTCTGGCTTTTTTGTTTCGCTACTTTTTGG CCTTGGCCCATTACTTGGCGGGATTTTTCTGGTTGCATTTGCACTTGCTTTTCATCTTCAGCATGCTCTCCTCATGGGTA CAGCTTGTGGTATTGCCTTTGTTCTCGGCGCCTGGCGACCTGTGCAGCTAATTTTGTCTTCAAAATTGGGATTTTTTCCT GTTGTGTCTCTCCTCCTAATGGGGGCTGCTTTCATCCATTTTTCTTCTTCTGGGGTATTGAAGCTTGCAGCTTACAAGAA AGCCTCAGTCAATGACCTACCTACACTCACTGGCTTCCCAGTGAGTGTTCACACTCTTCAATCATTCATATCATGTGGTG CGATTGCTTTTCATGCTTTGGCTGAAGGACTTGCGCTGGGAGTTGCTGCACCAAAAGCATATGGACTTGGTCGTCACATG GTCCTTCCAGTCTCGCTACATGGGCTTCCTCGAGGCGCAGCTGTAGCTAGCTGCATATTTGGCGCCACTGATAGTTGGCA CGGTTCTCTTGCAACTGCTGCCTTAATTGGATTTATGGGTCCAATTTCAGCAATAGGAGCTATTCTCACTGGAATTGATT ATAGTGGTCTTGATCACATAATGGTTTTTGCCTGTGGCGGATTAATCCCTAGCTTTGGTACTGTAGTAAAGAGAGCACTT AGTTTGGATAAACGGAAAAGCACGTGTGGCCTCATTATAGGTATTGGTTTTGCTACTTTATGTCTAACATTCACTAGGTT GGTTTGCTTGCATACACCATACTGCAATTCTGCGCCCGAGGCAGTTAGATAA
CDS sequence (LotjaGi1g1v0459700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCACATGGCTCCAAATCTGAAGCTAAGGTTATGTGTTCCTTTGATGTTGTTTTTAGTGTTAAGTTTTGTTCTCTT CGGCATTTCGAATGCTGAATTGGAACAACAAGTTTTACATAAGGTTAGAGTTGCTCCGCATAAGGATGTAGGATCCAATG TAATTGGTGGTGCTGGTTTAGAGAATTCCTTTAAGATTGAGAATGCCAATAATTTGAAGGGTGGAAGCAGTAAAGTTTCG GTTTCGACGGTTGCATTGTTTACATTGGCAATGGCAGCTGCCACTGGTTTAGGTGCTGTGCCTTTCTTCTTTGTGGAGCT TGATCCACAATGGGCTGGGCTATGCAATGGAATGGCTGCAGGTGTCATGTTGGCTGCAAGCTTTGATCTAATACAGGAAG GGCAGGAATATGGTGCTGGAAGTTGGGTTGTAACTGGGATTCTAGCTGGTGGAATCTTTATTTTGCTATGTAAGAAGTTT CTTGAGCAGTACGGAGAAGTAAGCATGTTGGATATAAAAGGTGCTGATGCAACCAAAGTTGTTCTTGTTATTGGAATAAT GACTCTCCATTCTTTTGGGGAGGGATCTGGGGTTGGAGTCTCCTTTGCTGGCTCGAAGGGTTTCTCTCAAGGCCTGCTGG TAACTTTGGCTATTGCTGTACACAACATACCAGAGGGATTAGCTGTGAGCATGGTACTGGCATCAAGGGGAGTCTCTCCA CAGAATGCTATGTTATGGAGCATAATTACATCTTTACCTCAGCCTATAGTTGCTGTTCCTTCATTTATGTGTGCTGATGC ATTCAGCAAGTTCCTTCCTTTCTGTACGGGATTTGCAGCTGGATGCATGATTTGGATGGTTGTTGCAGAAGTGCTTCCTG ATGCATTCAAGGAAGCCTCAGCTTCTCAGGTAGCCTCAGCTACTACCATTTCTGTAGCATTTATGGAAGCTCTTAGCACC TTCTTTCAGAATTTCAGTCATGATTACAGCTCTGAGGATGCTTCTGGCTTTTTTGTTTCGCTACTTTTTGGCCTTGGCCC ATTACTTGGCGGGATTTTTCTGGTTGCATTTGCACTTGCTTTTCATCTTCAGCATGCTCTCCTCATGGGTACAGCTTGTG GTATTGCCTTTGTTCTCGGCGCCTGGCGACCTGTGCAGCTAATTTTGTCTTCAAAATTGGGATTTTTTCCTGTTGTGTCT CTCCTCCTAATGGGGGCTGCTTTCATCCATTTTTCTTCTTCTGGGGTATTGAAGCTTGCAGCTTACAAGAAAGCCTCAGT CAATGACCTACCTACACTCACTGGCTTCCCAGTGAGTGTTCACACTCTTCAATCATTCATATCATGTGGTGCGATTGCTT TTCATGCTTTGGCTGAAGGACTTGCGCTGGGAGTTGCTGCACCAAAAGCATATGGACTTGGTCGTCACATGGTCCTTCCA GTCTCGCTACATGGGCTTCCTCGAGGCGCAGCTGTAGCTAGCTGCATATTTGGCGCCACTGATAGTTGGCACGGTTCTCT TGCAACTGCTGCCTTAATTGGATTTATGGGTCCAATTTCAGCAATAGGAGCTATTCTCACTGGAATTGATTATAGTGGTC TTGATCACATAATGGTTTTTGCCTGTGGCGGATTAATCCCTAGCTTTGGTACTGTAGTAAAGAGAGCACTTAGTTTGGAT AAACGGAAAAGCACGTGTGGCCTCATTATAGGTATTGGTTTTGCTACTTTATGTCTAACATTCACTAGGTTGGTTTGCTT GCATACACCATACTGCAATTCTGCGCCCGAGGCAGTTAGATAA
Protein sequence (LotjaGi1g1v0459700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLHMAPNLKLRLCVPLMLFLVLSFVLFGISNAELEQQVLHKVRVAPHKDVGSNVIGGAGLENSFKIENANNLKGGSSKVS VSTVALFTLAMAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQEYGAGSWVVTGILAGGIFILLCKKF LEQYGEVSMLDIKGADATKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMVLASRGVSP QNAMLWSIITSLPQPIVAVPSFMCADAFSKFLPFCTGFAAGCMIWMVVAEVLPDAFKEASASQVASATTISVAFMEALST FFQNFSHDYSSEDASGFFVSLLFGLGPLLGGIFLVAFALAFHLQHALLMGTACGIAFVLGAWRPVQLILSSKLGFFPVVS LLLMGAAFIHFSSSGVLKLAAYKKASVNDLPTLTGFPVSVHTLQSFISCGAIAFHALAEGLALGVAAPKAYGLGRHMVLP VSLHGLPRGAAVASCIFGATDSWHGSLATAALIGFMGPISAIGAILTGIDYSGLDHIMVFACGGLIPSFGTVVKRALSLD KRKSTCGLIIGIGFATLCLTFTRLVCLHTPYCNSAPEAVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| SignalP_EUK | 1 | 32 | 32 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 27 | 16 | - | – | |
| Phobius | 28 | 32 | 5 | - | – | |
| Phobius | 33 | 83 | 51 | - | – | |
| PANTHER | 73 | 355 | 283 | 2.1E-122 | – | |
| PANTHER | 73 | 355 | 283 | 2.1E-122 | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 84 | 104 | 21 | - | – | |
| Phobius | 105 | 110 | 6 | - | – | |
| Phobius | 111 | 131 | 21 | - | – | |
| TMHMM | 111 | 128 | 18 | - | – | |
| Phobius | 132 | 136 | 5 | - | – | |
| Phobius | 137 | 156 | 20 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 157 | 176 | 20 | - | – | |
| Pfam | 176 | 300 | 125 | 7.1E-11 | ||
| Phobius | 177 | 193 | 17 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 194 | 212 | 19 | - | – | |
| TMHMM | 212 | 234 | 23 | - | – | |
| Phobius | 213 | 233 | 21 | - | – | |
| Phobius | 234 | 244 | 11 | - | – | |
| Phobius | 245 | 265 | 21 | - | – | |
| Phobius | 266 | 270 | 5 | - | – | |
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 271 | 292 | 22 | - | – | |
| Phobius | 293 | 303 | 11 | - | – | |
| Phobius | 304 | 325 | 22 | - | – | |
| Phobius | 326 | 336 | 11 | - | – | |
| TMHMM | 337 | 359 | 23 | - | – | |
| Phobius | 337 | 359 | 23 | - | – | |
| Phobius | 360 | 365 | 6 | - | – | |
| PANTHER | 366 | 576 | 211 | 2.1E-122 | – | |
| Phobius | 366 | 382 | 17 | - | – | |
| PANTHER | 366 | 576 | 211 | 2.1E-122 | – | |
| TMHMM | 366 | 385 | 20 | - | – | |
| Phobius | 383 | 393 | 11 | - | – | |
| Phobius | 394 | 417 | 24 | - | – | |
| TMHMM | 395 | 417 | 23 | - | – | |
| Phobius | 418 | 506 | 89 | - | – | |
| TMHMM | 505 | 527 | 23 | - | – | |
| Phobius | 507 | 529 | 23 | - | – | |
| Phobius | 530 | 534 | 5 | - | – | |
| Phobius | 535 | 553 | 19 | - | – | |
| TMHMM | 537 | 559 | 23 | - | – | |
| Phobius | 554 | 564 | 11 | - | – | |
| Phobius | 565 | 585 | 21 | - | – | |
| TMHMM | 566 | 585 | 20 | - | – | |
| Phobius | 586 | 600 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0459700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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