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LotjaGi1g1v0463900.1

Overview

Field Value
Gene ID LotjaGi1g1v0463900
Transcript ID LotjaGi1g1v0463900.1
Lotus japonicus genome version Gifu v1.2
Description Ankyrin repeat and zinc finger domain-containing protein 1; TAIR: AT1G01930.1 zinc finger protein-like protein; Swiss-Prot: sp|Q66H85|ANKZ1_RAT Ankyrin repeat and zinc finger domain-containing protein 1; TrEMBL-Plants: tr|I1L6T5|I1L6T5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0463900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:96937724..96945263) extracted from Lotus japonicus Gifu genome v1.2.

CAAACGGCTGGATAAATTATTTTGCCTTGTTATGGGCTAAGCCCAGATGGCTCGGCCCGGTAAGAAAATCGGGTTTATTT ACTTTTTTAACCCCGTCCCTTTCAACGTTTTCGTGATGAGATACTCAAAATTGAACTCCACACTCTCGTGAGTCCTTCGT GAAACACCTCTTTGGCTATGGCGGCTAATCTTCTTCCCGCATCAAGGTCTTCTACAACGACGTCGTCTCAGGAGAAACGA CACCGTTCCATCTTCGAGGTTCAACCGAACTTCTTCGACTCTTGCCTCCTTCTCCCTTCTCCTCACGCACCCATTTCCGA GCACCACCACCGCCACAGAAGGCTCAAAACCCTCGAACCATCATCGGACGACGTCGTTTTGGACGATGCCCCTCAAAACG CCGCCGTTTCGGTGCCTAGGTGGACCTGCAATACCTGCAAGGCGCAATTCGATTCCCTTCAAGACCAGCGTTCCCACTTC AAATCCGACATTCATCGATTCAATGTTAGATTCAATAAACCCTAATTTTCAAATTTCACTACCAAATTGGTCCTCTATAT TGTGAGCTTGATATGTTCATGTTTTGATTGTTTTCTGTATTGAAAATAAAATTGAATGCGAGTGGTTCTTATTGAGCTTA TGTAATGGGGTTGTTACTTGTATTGATGATAGGTGAAGCTGACAATTGCTGGGAAGAGTATTGTGAAGGAAGAAGATTTT GAGGTGCTGACATCTGAATTTGTTAAAGACTATGATGTGTCTAGTATATCTGGATCAGAGAGTGATGATGATGACAGTGA AAATGAGTCTCATAGTCAAAATCAAGTGCTTGATAAATATGGTCAAAGCTTTAAACAGAAGCTGTTCATCCGTCTTCAGT CAGGGCAGAGAGTTTCGGTCTGGAAGGGCTTGATTATGAATGTGACTGATAGTGTGTTGTATGGGAGTGAAGAAGTGGAG AAAGACGTGTTTGAGAAGCTGAAATCTCTGACTATTGAGCCCAGGGATAATACTCGTTTGAGAATCGTTCTGCTTGCGTC GGGCGGGCACTTTGCCGGGTGTGTCTTTGATGGTGATGTGGTTGTGGCTCACAAGACTTTTCACAGGTTAGAATATGCTT CTTGTTAGTAATCATCAAACATAATAGTTCTACTTTCTAAGATGTATTGTATAAAAAAATGGATACGATTGAAATTTCAT TTAGGAAGACTGTTTGGGGCTTTGGGCTGCAGATTAGCAATGTGTGCATAATGCATACGTCATTCAATCATGCTGGAAGA CTGATATTGAAATATCATCAGTGAAGCATGCATGATTGTCAGTGGTTTTCTGTTTGAGGTCCAGTCCTTCGGAAGTCTTG TGTCGGGATAAATTGTTGCTATTGTATGTGTGTTTTCTTTTACATGGGTGAGTGAGGCTTGAGCCAATGAGCCCCGCAGT AACTAGTAACACTATTAAAGATCAATGCTCTTGCCTGTTATGTAATGATGTTGCAAGCTGATTTTGTAAAGCTGATTTCT CCGGGGACAATAAAAGCAGTTTTATTCTCCTAAGAACTACTTAGGACTTTCTGCGTCATCTTAAGTCATTCATAAATCAA ATGGGCGTTTTACACAGCCATTCATTTTTCATTTGTCAAAACTCAATGATTTTGCAACTTTATGCAATGATGTTGTAAGC CAATTTTGTAAAGCTTATTTCTCTGGGGACAGTGAACACTTGAAAGCAGTGTGGTTCTGCTGTAACAACTCATGTGGGAC TTTCTGCTTCGTCTTAAGTCATTCATTTATCAAATGGGAGTTTGACACAGATTTAATGCTCAATTATATATTTATGCTGT TGACTTATTTGATTTTCCTCTAGATTTAGAATTAGTTCTTAATGCTTAACTCATCTATCTTTACTTTCTGAGAATAAATA CAATGTTGAGAACACCTTTCCTTTCAATATTGTTTTTCTTCACGGAGACAAACCCTGGGGATTATATCTCATATAACTTT GAAACAATTGTACGATTTTTTTAAATTGACATTTTAGTTATCCGTTATGTGATTATAACAACGACAACAATGGCAGTGGT TAATGATTTATGCCAATAATATTTATCAGAATTGTTGATATTAGAGTTCTAGTGCTTTATGTATAGAGTGAGGGAAAGGA GAGAACAAAGACTAAATACTCCAAAATTAATATTTGACATGATATGAGATGATATGTCGATTGTTACAAAAGACAAAATA CTAATTTTTATTTATACTTGTACTTAATTATAATTTAATAAGGAAATAATTAATAAAATATAAGGAACTATGCAAACCAA TTCTAAGATGTCACCTAATATACTGTAAAACATTCTTAGATGCTATATTGATATTATTCTTCATATAATCTAACAAGAAT AAAAACAAATATGTATAACCTTTTCACTCTTTCAGCAGTTTCTTTCCTTCCCCTTTTTACTGTTCCCAAGACAGCAATGA CCTATATTGCGCTTCATAATTATTGACCAAATATGTATGTATTGCTATTTTGTTATCCATCTTTATTATTGCTAGTTCTA TTTGAAAATTGTACATGACATTTTAAAATTTGTTCTTAAACTCTTATGATTCTCATACAGATATGTTGTAAGGGCCAAGG CAGGGAAAAAGCAATCATCTAAAGATGCTTCTGGCAGGCTTGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAA CTTGCTCTAAAGAAGGTGTTCTACTCAAATCTATATCACTTTTCTTGCCAGTTGTTAACCTATTGTTTTGCACTTTGTTA TTCTGAAATTAACTAAGAGTAAGCCTATTTATAAATTATTATGCATTGTGGAATTGGAGCTAGTTATATACTGGTTTAAT AAATCTAAGATATGGTCAATGGTACTATGCTTTATTATTTCATTTCGAGATGTGGAAGTGGAAACTTGTGTGTATGGACC TATAATTACTTGAAATTAGTAAAGTACGGTAATTTTTGAAAACTACTGAATTTCTCTTTTTAATTTATTGGACGAGGGCA ATATAATTTGTTAGTTTGCTGTTTCTGTTACGAACCAACAATCAGAATTAAAAAATCTATTCCTCCAAGGGGTTTCCCTT ACAACTGAGCCACTGCTCTGTTTCCTGAAAGAAATAATTAATGGTCCTAGTCTCCAGCTTATTTATCTAACTAGTCCCCT CCTGCTAACTAACTGCTATAACAGTCTCTAACTAATTTCCCCTCCTCCCATATCCTAACAATTTACTATATTGAAAAAGG TATATAATATGTTTAACTTAAACTGCATTAAGATTTTCTCCTCATAAAGTACAAAATGCCTACTCAAAATTATTTATAGT TGAAGTAACAACAATAGCTTGATGTGTCAAGATTTTAGAACTCCTAATGTCATCTGTGATTATTTATGAATTCTTATTTT AGGTAGTAATATAAATGTGATAATTAGCCCTATTGGTCTCAAATTTTGACAAATTGACTGTTTTAGTGATTTTTCTTCTA ATTTTACTAACAGACACTTATTCTCAAACATGCATGGCTATGCAAAAAACACTGCTTGTTGTTTGTTACCCTTGTATTAG TGTTTGGGTGCATATTCATTTGTGTGCAACAGCATTTGAATTGGGACTGATTATTGGCATACCAATGTTTTAGGAAGTTC ATGAACTGCTTGCTGCTTGGAGACCTTATTTTGACGCTTCTAGTTGCATTTTAATACACGCACCTTCAAGTAGTCGTCAA CTGTTTTATGATGGAGAAAGATCTTATTTTACCAATCCGCAATGTCCTATTAGAAATATTGCTTTGAATGTTAGGAGGCC AACTTTAAAGGAAGCAAAACGTGTATATAGCCACTTGATGCAAGTATCCTATGAAGCAGATGAGAATGAGATTTTACAAA GCAACCAAGATGACTTGGTACCAATTCACATAGCTGAAACAAATAGCAGCCAATCCTCCAGCAAAGGGGACATGGCTGTG TTGGATGACAAAGATAAAGCTGAAGCTTGTTCAAGTAAACCAAATGATGAACTACGTTTTTCAAGTAATGAAGAAAGTGA GAATGAGCTTCCTGGTAAATCAACTCCGTTACATGAAGCTGCAAAATCCACCGACACTCAAAAGGTTATGGAACTCCTGG AACAGGGCTTGGATCCTTGCATCAAAGATGAGAGGGGACGAACCCCGTATATGTTGGCACAAGACAAGGAAGTCAGGAAT ACTTTCAGAAGGTTTATGGCGTCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGA AATGGAAGAATCGCAAGCTGCTAAGCAGGTGATTCTGATACTTGTTGGAATAAGTTTTGAATTCAGATTTAAAATTAAAT GGCAACGTTTTTTATTCTCCATCTCGTTTTCTCTTAATTTTTGATAATTTACTGATAAATTTATTGGTTGTAAAAGTAAG CTTGGGAATAAGTGTGACTGGTTGAAATGTGTCCTTCATATCAGGGAACGTTGTTAGGAAAAATCCATTTCTGTTGTCAA ATGTTGCATATGTGCCTTGATGTGTATATATAGCTAGCAACACTGTGGCTAAGGGATATTGTTTATCATTCTTTTTTAGG CAGGGCCATCTGAAATTATTTTGTACATATATGTCTAGGAAGGATGTTATCTAATATGTACTGTTCAACAATAAGTTTAA AACAACACATAAATAAAGTCTGGAATTTTATGAGTTTGTTCTATTGTGCTAGATTTGCCTCATAAATGGCATGTTTGATG GCTGAACTGACTAATTGAAACAAGGCATATCCAAGCTTTAAATAAAATTTGTTTGCAACCTGGCCTTCTCGTAGTCAGAG ATAAATGTTCTGCCTCTAGTCTCTACTACTTCATCTCAAGTTTTGATGACAAAATCTTAATGGCTTTTTTGGCATGAATT TGTTAAATATAACTACTTTTAACTGTATCCTGGTCCTTTATTCACTCCATATCTTGTTTATTGAAGTATTTTAGGCTTTT AGCTTTCAAGGAGGTTTTTTTTTTCATTAATTGCTTCTAATATCCAATGTTCTCTATTTGAATTTAAAGTTTTATTTTGT TAATCAAATCTAAGAACTTCTATGACTGAGTAATCATTACTTCCTTTTGTGCTTGTACAGGCAGAAAAAGATGCTAAGAG AAAAGCTAGAGCAAAAGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAAGCTCAGGTACTATTTTATAATTTAAGTG TCTGTAATATGCTGACCTTGCATTAGCTTTTTAGCACTTATTTTTGATAGCATTTTGCCTCTGTCAATAAAATGAATTCT ATTGACAGTGTCATATCTTTGACATATACAGTCTTCAATCATTGTTGACTTCAATTTATTAGGGTATACCTTCAAGATTT TAGAGTTGTCTTGATAGTTTTGAAATAGTCAACTAGAGTGATAATGGTCCCTTCTCTTTCAAAAACTTCCTGTCTTCCTT TCTACCTTTGGCTACCAAACATTACACAATTAACTTGTGCTTGAGTCTTGCACAAGGGCGCATGAACAAATGAGCTTTCT GGTGAATTATGAAAATGAAATGGACTCTTTCACTTAACCGATTTTCACGTTCGATTATTATTCTTGGCTCCATTGCTTGT GCTTCCTGTTTGAGGCCAATACCTTTGCCAGCTATAGATTTTCTAAAGAATTTTTAATGTAAGGCTTTAATTTGCCACAT TTTGTGTTCCACATCGCATGTGTCTCTACTATTTAATCCATCGATCTTCATTGTTGTTGTTGAAAATCATTGTTCTGAGG AATCGTGAATGCGGTGTTCAGGCTGAAGCTGCCTTGCATAAGAATGATTCCAAAAGTGTAGACCATCAATTGACTGGTCC ATCATCAATTAAGGGACAATCTCAACTGCAAAGTGGGGTGAAATTATCGAAAGAGGTTTGATACTGAAACTTTTGCTGGC TTAAAATCTAAAAAAGATCACGTCTTTTGCAATTTTCCCGTGCTTAAATCAAGCTACGTGTTTTCATAACTCTTCCATCT GAGTATTTACCTCTACTGTTAATTATAAATGAACTATTGAACATTTTATTTTTTATTGTTCCTGTTTTTATCTTGAACAG GAAGAAATAAGAAGAGCGCAGGCTGAAGAAAGAGAAAAAAGAGCAGCTGCTGCAGAAAGAAGAATGGCTGCCCTCAAAAT TCAAGGTAATAGCGCAACCACTGCACCTACTATTTCAGAGCCTAAAAGTGGATTAGCCGGTGACATTTACTGTTCCTGTT GTAATTCATCGCTTGCCGGTAAAGTTCCATTCCACCGGTATAACTACAAATACTGTAGCACATCATGCATGCATGTACAC AGGGAGATCCTAGAAGATGGATGACAATGTCTCATATATTTTATTTACTAAATTGTTTTTGGTGCAAGTCAAGATTGCAG TGGATATATTTTCTTGGTAAAGTAATCTAGGTTGGGTAAAGGTAGAGAGAAAAGGGAGAGAAATAGCCATGTTGGAAGGG CTCAGTGGTGAATAACATGAGATTTTTGAAGGAAAAAGTGTGTTTTTCCATTCCAACATTGATGCAGCTAGAAATTATAA TGATATATGCTGCCTTCACTTTGTGCTTTGCCAAACATGAAAATATAGCCAATGACACTAGCGCGCACGACATTGATCTT GGATCATTTTCTTGTATTTTTCCCAGCATGGGAATTTGAGTTAAAGTATACTCCCTTTTTGCTCTCATCTCTGGTTACCG ATCTCATTCCCTCTTCTCTTGTTGCAGCTACCATAATTTTTTTGTGCGCCATGGCCGTCACCGTAATAAATAAAGGTTTC AAATTTAGAGCTTCTAGGCATGCTTTTCACAAGTAAGGGCAAGGGAAATTTCTTCCCTTGTAAACTTGTACAGGGCTTGT TCGTGATCCCATCAAGAATAACAGAACACTGGTTGAACAAAGGTTATGGCTGGTGAACTTTATAACTTCATCCACAAGTG ATTGGACCAGGAGTGAAAGAAACGTCAATTATTTAAAATCTTTTTCATCAATTCACTTAACACTAAAACTTAATTAAGTT AGTAACCTTGAAACTGTAGTTAATAACCAATTCATATGAAAATTTGCAAGTCCACCGGCCATTGTGACTTTACTCCATAA CGTGAAGGAGAGAAAAATCTAAATGACACTAATGGAAATCGAAATGTAAGTGTTGAATGTTATGAATGAATGGTGTTTTA GTTTGCAGTTTGCATAGCGATAAATCTAAAGTAGTAAGATGTGAAAATAGAAAAAAAAAATTAATATTGTATCTTTTTAC TTATCATAACCAAATAATCCAATGATTATGGGTTGAATCAATTCAATGTGTTATGTTCAACTAATTTTCGGTTATGTTTG ATATTTGATTTGAACATAGCGCACGTCATTGAAGTGTTCACGCAGAATTCAAAAAGTGGTTTAGGACTTAAGGTGCTTCA ATCTCAAGAGGAGAAAGGCG 

CDS sequence (LotjaGi1g1v0463900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGCTAATCTTCTTCCCGCATCAAGGTCTTCTACAACGACGTCGTCTCAGGAGAAACGACACCGTTCCATCTTCGA GGTTCAACCGAACTTCTTCGACTCTTGCCTCCTTCTCCCTTCTCCTCACGCACCCATTTCCGAGCACCACCACCGCCACA GAAGGCTCAAAACCCTCGAACCATCATCGGACGACGTCGTTTTGGACGATGCCCCTCAAAACGCCGCCGTTTCGGTGCCT AGGTGGACCTGCAATACCTGCAAGGCGCAATTCGATTCCCTTCAAGACCAGCGTTCCCACTTCAAATCCGACATTCATCG ATTCAATGTGAAGCTGACAATTGCTGGGAAGAGTATTGTGAAGGAAGAAGATTTTGAGGTGCTGACATCTGAATTTGTTA AAGACTATGATGTGTCTAGTATATCTGGATCAGAGAGTGATGATGATGACAGTGAAAATGAGTCTCATAGTCAAAATCAA GTGCTTGATAAATATGGTCAAAGCTTTAAACAGAAGCTGTTCATCCGTCTTCAGTCAGGGCAGAGAGTTTCGGTCTGGAA GGGCTTGATTATGAATGTGACTGATAGTGTGTTGTATGGGAGTGAAGAAGTGGAGAAAGACGTGTTTGAGAAGCTGAAAT CTCTGACTATTGAGCCCAGGGATAATACTCGTTTGAGAATCGTTCTGCTTGCGTCGGGCGGGCACTTTGCCGGGTGTGTC TTTGATGGTGATGTGGTTGTGGCTCACAAGACTTTTCACAGATATGTTGTAAGGGCCAAGGCAGGGAAAAAGCAATCATC TAAAGATGCTTCTGGCAGGCTTGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAACTTGCTCTAAAGAAGGAAG TTCATGAACTGCTTGCTGCTTGGAGACCTTATTTTGACGCTTCTAGTTGCATTTTAATACACGCACCTTCAAGTAGTCGT CAACTGTTTTATGATGGAGAAAGATCTTATTTTACCAATCCGCAATGTCCTATTAGAAATATTGCTTTGAATGTTAGGAG GCCAACTTTAAAGGAAGCAAAACGTGTATATAGCCACTTGATGCAAGTATCCTATGAAGCAGATGAGAATGAGATTTTAC AAAGCAACCAAGATGACTTGGTACCAATTCACATAGCTGAAACAAATAGCAGCCAATCCTCCAGCAAAGGGGACATGGCT GTGTTGGATGACAAAGATAAAGCTGAAGCTTGTTCAAGTAAACCAAATGATGAACTACGTTTTTCAAGTAATGAAGAAAG TGAGAATGAGCTTCCTGGTAAATCAACTCCGTTACATGAAGCTGCAAAATCCACCGACACTCAAAAGGTTATGGAACTCC TGGAACAGGGCTTGGATCCTTGCATCAAAGATGAGAGGGGACGAACCCCGTATATGTTGGCACAAGACAAGGAAGTCAGG AATACTTTCAGAAGGTTTATGGCGTCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAA AGAAATGGAAGAATCGCAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCTAGAGCAAAAGAATTAAAGAAAT TGCGTAAAGCAAAAGAAAAGAAAGCTCAGGCTGAAGCTGCCTTGCATAAGAATGATTCCAAAAGTGTAGACCATCAATTG ACTGGTCCATCATCAATTAAGGGACAATCTCAACTGCAAAGTGGGGTGAAATTATCGAAAGAGGAAGAAATAAGAAGAGC GCAGGCTGAAGAAAGAGAAAAAAGAGCAGCTGCTGCAGAAAGAAGAATGGCTGCCCTCAAAATTCAAGGTAATAGCGCAA CCACTGCACCTACTATTTCAGAGCCTAAAAGTGGATTAGCCGGTGACATTTACTGTTCCTGTTGTAATTCATCGCTTGCC GGTAAAGTTCCATTCCACCGGTATAACTACAAATACTGTAGCACATCATGCATGCATGTACACAGGGAGATCCTAGAAGA TGGATGA 

Protein sequence (LotjaGi1g1v0463900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAANLLPASRSSTTTSSQEKRHRSIFEVQPNFFDSCLLLPSPHAPISEHHHRHRRLKTLEPSSDDVVLDDAPQNAAVSVP RWTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTIAGKSIVKEEDFEVLTSEFVKDYDVSSISGSESDDDDSENESHSQNQ VLDKYGQSFKQKLFIRLQSGQRVSVWKGLIMNVTDSVLYGSEEVEKDVFEKLKSLTIEPRDNTRLRIVLLASGGHFAGCV FDGDVVVAHKTFHRYVVRAKAGKKQSSKDASGRLAHSAGASLRRYNELALKKEVHELLAAWRPYFDASSCILIHAPSSSR QLFYDGERSYFTNPQCPIRNIALNVRRPTLKEAKRVYSHLMQVSYEADENEILQSNQDDLVPIHIAETNSSQSSSKGDMA VLDDKDKAEACSSKPNDELRFSSNEESENELPGKSTPLHEAAKSTDTQKVMELLEQGLDPCIKDERGRTPYMLAQDKEVR NTFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAALHKNDSKSVDHQL TGPSSIKGQSQLQSGVKLSKEEEIRRAQAEEREKRAAAAERRMAALKIQGNSATTAPTISEPKSGLAGDIYCSCCNSSLA GKVPFHRYNYKYCSTSCMHVHREILEDG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 21 21 -
MobiDBLite 1 15 15 -
PANTHER 16 664 649 3.5E-212
SUPERFAMILY 78 113 36 3.37E-5
ProSitePatterns 84 106 23 -
MobiDBLite 139 159 21 -
Pfam 227 365 139 3.0E-46
Gene3D 370 553 184 8.4E-9
MobiDBLite 408 427 20 -
MobiDBLite 408 445 38 -
ProSiteProfiles 433 474 42 12.567
ProSiteProfiles 433 465 33 9.671
SUPERFAMILY 435 488 54 1.21E-7
MobiDBLite 507 597 91 -
Coils 509 554 46 -
MobiDBLite 512 526 15 -
MobiDBLite 537 556 20 -
MobiDBLite 557 577 21 -
MobiDBLite 578 597 20 -
Coils 580 609 30 -
Pfam 632 663 32 6.4E-10

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0463900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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