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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0471200 |
| Transcript ID | LotjaGi1g1v0471200.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SPX domain-containing family protein; TAIR: AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; Swiss-Prot: sp|Q93ZQ5|SPXM3_ARATH SPX domain-containing membrane protein At4g22990; TrEMBL-Plants: tr|A0A151TBH1|A0A151TBH1_CAJCA Putative membrane protein family; Found in the gene: LotjaGi1g1v0471200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98166145..98173096) extracted from Lotus japonicus Gifu genome v1.2.
TTGAGAAATGATTGTGTTGATTCAGGTAATGTATGCTTTAACTTTTTACAGATATTACATCAACTATAAGTTAATGAAGA AGAAAGTCAAGAGATATACAGAACAAATAGAGTTTGGAGCTCAAAATCGTCACAATGTTCTCAGAGATTTCTCAATGCTT CTAGACAATCAGGTAATCTCATCTGAATTGAATACCTATTTCTAGTAATTTTTTCTGAATTGAAAGATAAACATCTATCA TTGAAGATAAAAAAACTAGTACATGAGAAAACCAAACCAGAACTGACACTACCCTTGAATAATACTTGAATGCATATATC CCCTTTTCTGATATTATCCTAGATTTGTCAATTTCCCTTGTATAGAATCTGTCAATCTGTACATTACTCTTTAGGACACT TCTTTTACAAGAATGCGTGGGAAGAGCCCGAGAGCGCTTTTGTATGTGTTTGGATAAAAGTTGAGTACTATAATCTAAAT GAACTTTGTTTCTAATTCATCAGAAGAGTTCCTTCCCCTTTTTACCTACGTGCCAATGTTTGTTTGCCTTTTGGCCAATA GATATCCAAACATAGCCCTTTTTGACAAATCTCACTCAAAGTTTTCAAACTTTTGAGCTTAGAAGTGCTTTTAAGCATAT TTGATCTAATAACAGCTAATAAAATATAAGGCCTCTTTTCTTGCTCTTGAATTTCAGGTAGAAAAAATTGTCTTGTTTCT GCTTGTACAACAAGGAGTACTTTCACATAGGCTATCCAATATTGGACAAGAGCACCAAACTCTTCTACAGCAGCCAAATA ATACAAACATATCTGAACTCCAACAAGCATATCGTGACGTTGGCCAAGATCTTTTAAGGGTCCTTCATTTTGTGGAAATG AATGCTATTGGTCTGAGAAAGATCTTAAAGAAGTTTGATAAACGGTTCGGCTACAAATTCACAGATTACTATATCAAGAC GCGCGCAAATCATCCTTATTCCCAGTTAAGGCAGGTTTTCAGGCATGTGGTAATGTCTCTAAATTCTAACCTTGTGTAAT TTTTTTCTTCAAGTCATGTATGTATCTTATTAAATGTTACAACACTAAAGTTACAAAAATGTAAGATTGTATCATGCAAT AGCTTCTTTTTATATTGTTGGAAGCAATATCATGTAATTGCTTCTCTGCAGGGGATTGGTGCTGTAGTTGGAGTTTTAAC TCACAATCTTGCAGACCTTCAGGATTTACAACAGTGTCAAGGAAGCTACATTTCTATATATGACCAGCCTTCTTATGTTC ATCAAGTTAGTTCTTGATTCAAATTTATATGCATAACAATGCTAACTCCCTCAAATTCTCCAACTGTTCTTGTGTTTGCT GTAAATAACAATTCGAGGGAAACAAAAAGGAAGCATAGAGTTTGTTTATGAAATTTTGGTTAATAATTATCAATGGGCTT TCACACCATAAGTGTTGAGAAGTCCCGACTAAAGATATGACCCAATAAATGTTTATAAAGGGTAGAACAACCGTCACCTC TAAGCTAGCTTTTGAGGTTGAGTCAGGCCTAAACCAAATTTGAAAATGGTATCAGAGCCTTTATGACCAAGTAGTCTAGA GTTGAATCCTTTTTTCCCCCATTGTTGTAATAAAAAGTTGAATTTCAACACATGGTAGGTTGGTCTGTGTGCATTGTCAT GCTTCAAGGGGGCTCTTGCGTGAGGGGGCTGTCAGAAACATAATATGAAACCATTTATGTGTGCTTTATATCCAATAACT TAAGTTTTTGGGATAGTTGATTAATGAAATAAGCTTGTTTTATAATTCATAATATTAAAGATATTCTTGCAGCACTTGAT GACAGTTTCATTCTGACTTATCTTAAAGGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATTCAA CAAATTTCCTTCAGTTTCTGGGAAGAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTTCTT GATGAGAGATATCACTTCATGTCTCTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGTTGT GCCTACAGCAGACAACTACTCTTTGAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGGTTCAATGGCTGTTG CGCAGGTGTTCTCTTCGGTTTACTTTAGTGCGTGGTCAAACCGATCATATCTTAGACCACTCATCTTCAGTAGCATTGTT CTTCTAGTTGGAAACATCATGTATGCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTTCTG TGGGTAAGCTATTTGTCTTACTCTAACTCCTCAATTTGACATGCTTTCCATATTGGAAGCTAATATTTGCTTCCTAGTTT CTAGATACATCAAAATTTGCAGAGCATTATATGTACTTTTTTTTGGCTTATCTTATTAAGAAAGCTTAGCTACTTCAGAT TCTGGTATATTTTTATCATCACCTAGTGGAGCATAGACTTAAAAAGAATCAACTGTGTACGTATGATGTATGTGCATAGA TATAGCATTGAACACAATGGATTAATATAAACATTTATGAAATCAGTTATGTTCTAAATGAAAATAAACATTGGTAACTA AGATATTCTTATAATCCGGGTTAGGACTTACGCAACCCTATATTATATGCGAGGATTGCTCTACCTTATATAAGGATTTA TTTAGACATATCTCTAGTCAATGTAAGACTTCTCAACACACTCCCTCTAGCCTATGACTGGACATTTTGAGCGTGTAGTT TGTAGCAGGACTGACATCTGCGATTGACCAATTTATGGGTGGTCTCCAATAATCGGATCTAGGATAGTCTCTAATACCAT CTTAGCATTCAAATATATTCTAGTATCTGGTCTTTTTACCTAACTATGTTTCTTGTGTAAGAATAAAAAAATGCTATCAT CCTCTTTCTTGACTAACCGCCTAAAAAGTATATAAAGGTGTGACTCAAAAGGGAGTTTCTTGCAGTTAGATTAGTTGAGT ATAGTATACTATGTATGCATCTGATATTCCGTATCAGAGAAATAAACTTAGATCTACAAAGAAAACATAGATGCATATAA GGACATATTTGTTTGGAAAAGGAATTGCTAATTTTTGTTAACTTGACTTTGTTGATGTGGTCAATATATTGATATTGACC TTTTCAGGTTAGGCTCTGCAAGGGCCGTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCT TCAGCGGGTTTTGTTAGTGCAAGTGCTCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAA GATTTACAAGTTCACCATGAATCAAGACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGT TGTGGACTTGTTTCCAGGAACCGTCTCGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGTATGTCAGCA ATGTTTCTTGTACTCTTTTACTTACACGGATGTCACTAATTAAGAATGCAATATGCTTATGTTGTTTTATATTTCATTCT TAATTAGATTTTTTGCATTTGGTCTAAATGAATAGGACAAGCAGTGCATATTGCAGTTGAGAATGGGCATACACAACCTT TACTTATGAATTTAGAAGCAAAGGAGAAGGATGAAGACAGAGAAGAAGGAGAAGAAGAATATGATGATGCTAAAGAATCT CAGAAGCCTGTTACTTCTATTGTGATGGCATTTAAGTTACTCACCCCATCGGTAAAGGTGAGAAACTCGTGATGACTTTT ATGCAAATCTTTGAGAGTTTATGTAAATAGTTTCTAACGTATTTATAAGCCGTTTTGAGAATATTTTCATAAGCTTCCAA GATTAACTTATTAATATGGGTTTAAATTTCCTATAACATATTTTGAGCTTATTCCAATAAGCTTCTTAAACTCACCCTGA CTAAGTGCTTATTGCCATACTGTTTACTCAAATTCACCCAAAATACACATTCAAGAATAGTAACTTGAATTGCTGAGTTT GAATTTACAAGGGATAAATATAGTTTCATTTAGATGATGTGATACACTAATAGTAAGAGATTTGGAATTTCAGTTAAAGG GTAAGCCTCAGTCAGATTTGTGAAAATATATTTATAGACTGTGATTCCGTGAAAGAACAAATTTAAATTTTTTCTTCATA TCTGTTTTTTCTTTTTGAACCTTCTTCAAAATGAACATGAAAAAGTAGTCCTGTTAGTTATAATAGTATGAAGTATGACT CAATGTTTTGCACTAACTGTGGATATTTTTATCAGGTTCAATTATTTGTGTATTTTATGCTCAAGTATGCAATGGAGATC ATACTTGCTGAATCAAGCCTTATTACCGAATACTATTTCGTTTGGTCAACCAGCAAAGTAGCCATTTTCCTTGCATGCCT TGGTCTTACTGTGCTTCCTGTAAATATCATTGTAGGAAACTACATCAGCAACATGTTTGAAGAAAGGTAGACCTTCAACT AATATCTTAAAAGTAAAAATTAATTTGTAATACTCAGTATTTATGTTTTATGGCTAGAGGGACCGTTAAGAATGAACCAT ATTCCATTTAAAGTATACCAGACCTTTATTACACACACGAGCGCACACACACAGGCATATATGTTTGTGCTCGGCCTAAC TCATCTCCAAAACCTAACTCATAATGTGAGGATTGCCAAAGCCTTTATAACTTCAGTCATGTCTCTAGTTGATGTGAGAT CTTAACACACTCCTTTTATGCCATGGTTGAACATTTGGAGCGTGGAGTTTGTAAAACTGACTGCAATGAAGGTGGAAATT CAGGGGATGATCACAATGAAAGCCGAATTTTGGGTTCAATATTAGATCTAAAATAGACTCTGATATCGAGTTGGAAATGA TGAAAACTTGGAGTTATTTATGAATCATTCATGTCAAGAACCAATTATCCCAAAAACTTAAGCTATTGAGTAAAAGACTT TGAATGATTCTATATTATATTTCTAACACGCCCCCTCACGCAAGAGCTCACTTGGGCTTAAAGCGTTGACAATACACAAC CCACCTGACATTCCACTTTTTATATTAGAAGAATTTGTGGCGGCAAATATCGAACTCTAGACCACTAGTCATAGAGACTT TGATATCATGTCAAGAACCAATTATCCCAAAAGAAAATACCCATGTCTTAAAAGTTAGCTGCTAAACTAATGATACAATA ATAACTTCCAATTTAGACTTTATAACAGCAAAAAAATTGTACTAAATTCCTAGGGATCCTCAAAATATCCACTGTGAACA GTTATTTAGTCTTTAATCCTCAAGCTCTAGGATTTGATTTTTATTAAGAAATCTTTTAAGTTGCTCATAGGTTGATGCAC ATTTTAGAAATAGACTTTGAGCCTTTAGATACAGGCTTATTTGTAGCTTGTATACTAGAAAAACACTAAATAAACTCCAA TAAGTGCTATTTGGTTTGCATCCAAACGGGTTCTTTGCACCACATTTATAATTTGTCCATTTTAGAAATCTTTCCTCTTT CTCTATTATTATCTGATCCATAAGATCTTTCTTTTCTGATGTGTTTGTACTTGCAGGCAAGTTCTACTGACATCAGAAAT CATGGTTTGCATTGGACTACTCCTAAGCTTCCATACAATAATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTA TCACATTTGTGTTTGCTGAAGTTCTTGAAGGTAATTTATTCTCATACTATATAGTAATAAATAAAACAAACATGGATAGA AGAATTCAGACAACTTTGCATCATCACCAGATAAAAACAACACTGCTTAAACTAATCTGATGACTATGAACAGGTACATA GTTTGTAACCACCATGCAATAAGTATTGGTTATGTTGTGGTATGAGGGTATATCTCAGGGTTATGGTATGAGAGGGGCAT GGTCATGGGCATATTTTTAAAACCACATTGGATGAGGAGCAAACCATATTAGTGAAGGACACCACATCTTTCACCCAAAA CCTTAAGGCAATGGGTGTATGAGTTCTTTCACTAACAAACTATTTATCACACCCATTTTTATTCAATGTTAGACTTCTTT ATTTTTTATTTTTATTTCTTGATCACATTTTAAGAATTCCTAACATATTGCACAAACAAAGTCTACCAATCTTTCGTGTA CTCTTCAATGTTACTAGTTCCGGTACCTAGACCAAATGATACAATACAAGCACAAGTTCCTAGATTCATGGAGATATAGA ACAACGTATAAGTTATCTTGCTTGCAGATCCACCATGTGAGTCTCCAACAATTTTTTAAATAATTACATATCCGATTTGA CCTATAAACAGCTTGGTGGTTTCTTATTGAGGATAAAAAAAGGGAACAAATGGATTGTTTTACAAGTTAACTGATAATTT ATATTGTCACTCATTGGCCATAAGTTAATAGTCTACTTTAAGTGATAATCTTTCAGGTTGATGCCTTTTCTTCCCATATG AGAAAGTTTTGGATCCATTTTTTTGCTTCATCATCCTTCGCTAGATAATGACATGCTTTGATATTTAATTTGTTTCTCAT CTTTTTCTGAAATCTGAAGAAGAAATTTGCTTCTTGAACATGGCTTCATATTTTGTTTGCTTGATCAATCCAGGAGTGAA CCTTTCACTTCTATCAAAAGTTATGTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGAGGATTACTGTCAACAGAAGCAG GAACTCTAGCACGAGTAATCGCAGATGCAACGATAACAATCGCGGGGTATCTGAGTGAAAGTAAACTCCTGAATGCCACC TTACTCCCTGCACTCCTCATCTGCATCTCATCCATTCTTGCTACCTGCTACACCTACAACTCTCTCTATTAG
CDS sequence (LotjaGi1g1v0471200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGTGTTGATTCAGGTAATGTATGCTTTAACTTTTTACAGATATTACATCAACTATAAGTTAATGAAGAAGAAAGT CAAGAGATATACAGAACAAATAGAGTTTGGAGCTCAAAATCGTCACAATGTTCTCAGAGATTTCTCAATGCTTCTAGACA ATCAGGTAGAAAAAATTGTCTTGTTTCTGCTTGTACAACAAGGAGTACTTTCACATAGGCTATCCAATATTGGACAAGAG CACCAAACTCTTCTACAGCAGCCAAATAATACAAACATATCTGAACTCCAACAAGCATATCGTGACGTTGGCCAAGATCT TTTAAGGGTCCTTCATTTTGTGGAAATGAATGCTATTGGTCTGAGAAAGATCTTAAAGAAGTTTGATAAACGGTTCGGCT ACAAATTCACAGATTACTATATCAAGACGCGCGCAAATCATCCTTATTCCCAGTTAAGGCAGGTTTTCAGGCATGTGGGG ATTGGTGCTGTAGTTGGAGTTTTAACTCACAATCTTGCAGACCTTCAGGATTTACAACAGTGTCAAGGAAGCTACATTTC TATATATGACCAGCCTTCTTATGTTCATCAAGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATT CAACAAATTTCCTTCAGTTTCTGGGAAGAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTT CTTGATGAGAGATATCACTTCATGTCTCTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGT TGTGCCTACAGCAGACAACTACTCTTTGAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGTTGGAAACATCA TGTATGCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTTCTGTGGGTTAGGCTCTGCAAGG GCCGTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCTTCAGCGGGTTTTGTTAGTGCAAG TGCTCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAAGATTTACAAGTTCACCATGAATC AAGACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGTTGTGGACTTGTTTCCAGGAACCG TCTCGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGACAAGCAGTGCATATTGCAGTTGAGAATGGGCA TACACAACCTTTACTTATGAATTTAGAAGCAAAGGAGAAGGATGAAGACAGAGAAGAAGGAGAAGAAGAATATGATGATG CTAAAGAATCTCAGAAGCCTGTTACTTCTATTGTGATGGCATTTAAGTTACTCACCCCATCGGTAAAGGTTCAATTATTT GTGTATTTTATGCTCAAGTATGCAATGGAGATCATACTTGCTGAATCAAGCCTTATTACCGAATACTATTTCGTTTGGTC AACCAGCAAAGTAGCCATTTTCCTTGCATGCCTTGGTCTTACTGTGCTTCCTGTAAATATCATTGTAGGAAACTACATCA GCAACATGTTTGAAGAAAGGCAAGTTCTACTGACATCAGAAATCATGGTTTGCATTGGACTACTCCTAAGCTTCCATACA ATAATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTATCACATTTGTGTTTGCTGAAGTTCTTGAAGGAGTGAA CCTTTCACTTCTATCAAAAGTTATGTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGAGGATTACTGTCAACAGAAGCAG GAACTCTAGCACGAGTAATCGCAGATGCAACGATAACAATCGCGGGGTATCTGAGTGAAAGTAAACTCCTGAATGCCACC TTACTCCCTGCACTCCTCATCTGCATCTCATCCATTCTTGCTACCTGCTACACCTACAACTCTCTCTATTAG
Protein sequence (LotjaGi1g1v0471200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVLIQVMYALTFYRYYINYKLMKKKVKRYTEQIEFGAQNRHNVLRDFSMLLDNQVEKIVLFLLVQQGVLSHRLSNIGQE HQTLLQQPNNTNISELQQAYRDVGQDLLRVLHFVEMNAIGLRKILKKFDKRFGYKFTDYYIKTRANHPYSQLRQVFRHVG IGAVVGVLTHNLADLQDLQQCQGSYISIYDQPSYVHQDPVLDSIKVAVGRLSNSTNFLQFLGRGALIMQEELPTPSEDHL LDERYHFMSLLLNLANTFLYMVNTYIVVPTADNYSLNLGAAASVCGVVIVGNIMYALAYDMNSIAVLLAGRLFCGLGSAR AVNRRYISDCVPLKLRMQASAGFVSASALGMACGPALACLLQTNFKIYKFTMNQDTLPGWVMAFAWLVYLLWLWTCFQEP SRENEGNYVPYRAQTGQAVHIAVENGHTQPLLMNLEAKEKDEDREEGEEEYDDAKESQKPVTSIVMAFKLLTPSVKVQLF VYFMLKYAMEIILAESSLITEYYFVWSTSKVAIFLACLGLTVLPVNIIVGNYISNMFEERQVLLTSEIMVCIGLLLSFHT IIPYSATQYVGSALITFVFAEVLEGVNLSLLSKVMSSRLSRGTFNGGLLSTEAGTLARVIADATITIAGYLSESKLLNAT LLPALLICISSILATCYTYNSLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 244 | 244 | - | – | |
| ProSiteProfiles | 1 | 142 | 142 | 15.892 | ||
| PANTHER | 14 | 289 | 276 | 0.0 | – | |
| PANTHER | 14 | 289 | 276 | 0.0 | – | |
| CDD | 16 | 138 | 123 | 9.4665E-64 | – | |
| Pfam | 86 | 142 | 57 | 1.4E-7 | ||
| SUPERFAMILY | 235 | 652 | 418 | 4.32E-21 | ||
| Phobius | 245 | 266 | 22 | - | – | |
| Pfam | 247 | 596 | 350 | 7.1E-15 | ||
| TMHMM | 247 | 269 | 23 | - | – | |
| Phobius | 267 | 277 | 11 | - | – | |
| TMHMM | 276 | 298 | 23 | - | – | |
| Phobius | 278 | 298 | 21 | - | – | |
| CDD | 285 | 399 | 115 | 1.40212E-14 | – | |
| PANTHER | 287 | 663 | 377 | 0.0 | – | |
| PANTHER | 287 | 663 | 377 | 0.0 | – | |
| Phobius | 299 | 303 | 5 | - | – | |
| TMHMM | 303 | 322 | 20 | - | – | |
| Phobius | 304 | 322 | 19 | - | – | |
| Phobius | 323 | 342 | 20 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 343 | 365 | 23 | - | – | |
| Phobius | 366 | 376 | 11 | - | – | |
| Phobius | 377 | 397 | 21 | - | – | |
| TMHMM | 380 | 397 | 18 | - | – | |
| Phobius | 398 | 478 | 81 | - | – | |
| Coils | 437 | 457 | 21 | - | – | |
| Phobius | 479 | 499 | 21 | - | – | |
| TMHMM | 479 | 501 | 23 | - | – | |
| Phobius | 500 | 510 | 11 | - | – | |
| TMHMM | 511 | 533 | 23 | - | – | |
| Phobius | 511 | 530 | 20 | - | – | |
| Phobius | 531 | 541 | 11 | - | – | |
| TMHMM | 542 | 564 | 23 | - | – | |
| Phobius | 542 | 562 | 21 | - | – | |
| Phobius | 563 | 567 | 5 | - | – | |
| Phobius | 568 | 591 | 24 | - | – | |
| TMHMM | 569 | 591 | 23 | - | – | |
| Phobius | 592 | 640 | 49 | - | – | |
| TMHMM | 636 | 658 | 23 | - | – | |
| Phobius | 641 | 660 | 20 | - | – | |
| Phobius | 661 | 663 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0471200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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