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LotjaGi1g1v0471200.4

Overview

Field Value
Gene ID LotjaGi1g1v0471200
Transcript ID LotjaGi1g1v0471200.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description SPX domain-containing family protein; TAIR: AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; Swiss-Prot: sp|Q93ZQ5|SPXM3_ARATH SPX domain-containing membrane protein At4g22990; TrEMBL-Plants: tr|A0A151TBH1|A0A151TBH1_CAJCA Putative membrane protein family; Found in the gene: LotjaGi1g1v0471200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:98166145..98173096) extracted from Lotus japonicus Gifu genome v1.2.

TTGAGAAATGATTGTGTTGATTCAGGTAATGTATGCTTTAACTTTTTACAGATATTACATCAACTATAAGTTAATGAAGA AGAAAGTCAAGAGATATACAGAACAAATAGAGTTTGGAGCTCAAAATCGTCACAATGTTCTCAGAGATTTCTCAATGCTT CTAGACAATCAGGTAATCTCATCTGAATTGAATACCTATTTCTAGTAATTTTTTCTGAATTGAAAGATAAACATCTATCA TTGAAGATAAAAAAACTAGTACATGAGAAAACCAAACCAGAACTGACACTACCCTTGAATAATACTTGAATGCATATATC CCCTTTTCTGATATTATCCTAGATTTGTCAATTTCCCTTGTATAGAATCTGTCAATCTGTACATTACTCTTTAGGACACT TCTTTTACAAGAATGCGTGGGAAGAGCCCGAGAGCGCTTTTGTATGTGTTTGGATAAAAGTTGAGTACTATAATCTAAAT GAACTTTGTTTCTAATTCATCAGAAGAGTTCCTTCCCCTTTTTACCTACGTGCCAATGTTTGTTTGCCTTTTGGCCAATA GATATCCAAACATAGCCCTTTTTGACAAATCTCACTCAAAGTTTTCAAACTTTTGAGCTTAGAAGTGCTTTTAAGCATAT TTGATCTAATAACAGCTAATAAAATATAAGGCCTCTTTTCTTGCTCTTGAATTTCAGGTAGAAAAAATTGTCTTGTTTCT GCTTGTACAACAAGGAGTACTTTCACATAGGCTATCCAATATTGGACAAGAGCACCAAACTCTTCTACAGCAGCCAAATA ATACAAACATATCTGAACTCCAACAAGCATATCGTGACGTTGGCCAAGATCTTTTAAGGGTCCTTCATTTTGTGGAAATG AATGCTATTGGTCTGAGAAAGATCTTAAAGAAGTTTGATAAACGGTTCGGCTACAAATTCACAGATTACTATATCAAGAC GCGCGCAAATCATCCTTATTCCCAGTTAAGGCAGGTTTTCAGGCATGTGGTAATGTCTCTAAATTCTAACCTTGTGTAAT TTTTTTCTTCAAGTCATGTATGTATCTTATTAAATGTTACAACACTAAAGTTACAAAAATGTAAGATTGTATCATGCAAT AGCTTCTTTTTATATTGTTGGAAGCAATATCATGTAATTGCTTCTCTGCAGGGGATTGGTGCTGTAGTTGGAGTTTTAAC TCACAATCTTGCAGACCTTCAGGATTTACAACAGTGTCAAGGAAGCTACATTTCTATATATGACCAGCCTTCTTATGTTC ATCAAGTTAGTTCTTGATTCAAATTTATATGCATAACAATGCTAACTCCCTCAAATTCTCCAACTGTTCTTGTGTTTGCT GTAAATAACAATTCGAGGGAAACAAAAAGGAAGCATAGAGTTTGTTTATGAAATTTTGGTTAATAATTATCAATGGGCTT TCACACCATAAGTGTTGAGAAGTCCCGACTAAAGATATGACCCAATAAATGTTTATAAAGGGTAGAACAACCGTCACCTC TAAGCTAGCTTTTGAGGTTGAGTCAGGCCTAAACCAAATTTGAAAATGGTATCAGAGCCTTTATGACCAAGTAGTCTAGA GTTGAATCCTTTTTTCCCCCATTGTTGTAATAAAAAGTTGAATTTCAACACATGGTAGGTTGGTCTGTGTGCATTGTCAT GCTTCAAGGGGGCTCTTGCGTGAGGGGGCTGTCAGAAACATAATATGAAACCATTTATGTGTGCTTTATATCCAATAACT TAAGTTTTTGGGATAGTTGATTAATGAAATAAGCTTGTTTTATAATTCATAATATTAAAGATATTCTTGCAGCACTTGAT GACAGTTTCATTCTGACTTATCTTAAAGGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATTCAA CAAATTTCCTTCAGTTTCTGGGAAGAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTTCTT GATGAGAGATATCACTTCATGTCTCTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGTTGT GCCTACAGCAGACAACTACTCTTTGAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGGTTCAATGGCTGTTG CGCAGGTGTTCTCTTCGGTTTACTTTAGTGCGTGGTCAAACCGATCATATCTTAGACCACTCATCTTCAGTAGCATTGTT CTTCTAGTTGGAAACATCATGTATGCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTTCTG TGGGTAAGCTATTTGTCTTACTCTAACTCCTCAATTTGACATGCTTTCCATATTGGAAGCTAATATTTGCTTCCTAGTTT CTAGATACATCAAAATTTGCAGAGCATTATATGTACTTTTTTTTGGCTTATCTTATTAAGAAAGCTTAGCTACTTCAGAT TCTGGTATATTTTTATCATCACCTAGTGGAGCATAGACTTAAAAAGAATCAACTGTGTACGTATGATGTATGTGCATAGA TATAGCATTGAACACAATGGATTAATATAAACATTTATGAAATCAGTTATGTTCTAAATGAAAATAAACATTGGTAACTA AGATATTCTTATAATCCGGGTTAGGACTTACGCAACCCTATATTATATGCGAGGATTGCTCTACCTTATATAAGGATTTA TTTAGACATATCTCTAGTCAATGTAAGACTTCTCAACACACTCCCTCTAGCCTATGACTGGACATTTTGAGCGTGTAGTT TGTAGCAGGACTGACATCTGCGATTGACCAATTTATGGGTGGTCTCCAATAATCGGATCTAGGATAGTCTCTAATACCAT CTTAGCATTCAAATATATTCTAGTATCTGGTCTTTTTACCTAACTATGTTTCTTGTGTAAGAATAAAAAAATGCTATCAT CCTCTTTCTTGACTAACCGCCTAAAAAGTATATAAAGGTGTGACTCAAAAGGGAGTTTCTTGCAGTTAGATTAGTTGAGT ATAGTATACTATGTATGCATCTGATATTCCGTATCAGAGAAATAAACTTAGATCTACAAAGAAAACATAGATGCATATAA GGACATATTTGTTTGGAAAAGGAATTGCTAATTTTTGTTAACTTGACTTTGTTGATGTGGTCAATATATTGATATTGACC TTTTCAGGTTAGGCTCTGCAAGGGCCGTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCT TCAGCGGGTTTTGTTAGTGCAAGTGCTCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAA GATTTACAAGTTCACCATGAATCAAGACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGT TGTGGACTTGTTTCCAGGAACCGTCTCGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGTATGTCAGCA ATGTTTCTTGTACTCTTTTACTTACACGGATGTCACTAATTAAGAATGCAATATGCTTATGTTGTTTTATATTTCATTCT TAATTAGATTTTTTGCATTTGGTCTAAATGAATAGGACAAGCAGTGCATATTGCAGTTGAGAATGGGCATACACAACCTT TACTTATGAATTTAGAAGCAAAGGAGAAGGATGAAGACAGAGAAGAAGGAGAAGAAGAATATGATGATGCTAAAGAATCT CAGAAGCCTGTTACTTCTATTGTGATGGCATTTAAGTTACTCACCCCATCGGTAAAGGTGAGAAACTCGTGATGACTTTT ATGCAAATCTTTGAGAGTTTATGTAAATAGTTTCTAACGTATTTATAAGCCGTTTTGAGAATATTTTCATAAGCTTCCAA GATTAACTTATTAATATGGGTTTAAATTTCCTATAACATATTTTGAGCTTATTCCAATAAGCTTCTTAAACTCACCCTGA CTAAGTGCTTATTGCCATACTGTTTACTCAAATTCACCCAAAATACACATTCAAGAATAGTAACTTGAATTGCTGAGTTT GAATTTACAAGGGATAAATATAGTTTCATTTAGATGATGTGATACACTAATAGTAAGAGATTTGGAATTTCAGTTAAAGG GTAAGCCTCAGTCAGATTTGTGAAAATATATTTATAGACTGTGATTCCGTGAAAGAACAAATTTAAATTTTTTCTTCATA TCTGTTTTTTCTTTTTGAACCTTCTTCAAAATGAACATGAAAAAGTAGTCCTGTTAGTTATAATAGTATGAAGTATGACT CAATGTTTTGCACTAACTGTGGATATTTTTATCAGGTTCAATTATTTGTGTATTTTATGCTCAAGTATGCAATGGAGATC ATACTTGCTGAATCAAGCCTTATTACCGAATACTATTTCGTTTGGTCAACCAGCAAAGTAGCCATTTTCCTTGCATGCCT TGGTCTTACTGTGCTTCCTGTAAATATCATTGTAGGAAACTACATCAGCAACATGTTTGAAGAAAGGTAGACCTTCAACT AATATCTTAAAAGTAAAAATTAATTTGTAATACTCAGTATTTATGTTTTATGGCTAGAGGGACCGTTAAGAATGAACCAT ATTCCATTTAAAGTATACCAGACCTTTATTACACACACGAGCGCACACACACAGGCATATATGTTTGTGCTCGGCCTAAC TCATCTCCAAAACCTAACTCATAATGTGAGGATTGCCAAAGCCTTTATAACTTCAGTCATGTCTCTAGTTGATGTGAGAT CTTAACACACTCCTTTTATGCCATGGTTGAACATTTGGAGCGTGGAGTTTGTAAAACTGACTGCAATGAAGGTGGAAATT CAGGGGATGATCACAATGAAAGCCGAATTTTGGGTTCAATATTAGATCTAAAATAGACTCTGATATCGAGTTGGAAATGA TGAAAACTTGGAGTTATTTATGAATCATTCATGTCAAGAACCAATTATCCCAAAAACTTAAGCTATTGAGTAAAAGACTT TGAATGATTCTATATTATATTTCTAACACGCCCCCTCACGCAAGAGCTCACTTGGGCTTAAAGCGTTGACAATACACAAC CCACCTGACATTCCACTTTTTATATTAGAAGAATTTGTGGCGGCAAATATCGAACTCTAGACCACTAGTCATAGAGACTT TGATATCATGTCAAGAACCAATTATCCCAAAAGAAAATACCCATGTCTTAAAAGTTAGCTGCTAAACTAATGATACAATA ATAACTTCCAATTTAGACTTTATAACAGCAAAAAAATTGTACTAAATTCCTAGGGATCCTCAAAATATCCACTGTGAACA GTTATTTAGTCTTTAATCCTCAAGCTCTAGGATTTGATTTTTATTAAGAAATCTTTTAAGTTGCTCATAGGTTGATGCAC ATTTTAGAAATAGACTTTGAGCCTTTAGATACAGGCTTATTTGTAGCTTGTATACTAGAAAAACACTAAATAAACTCCAA TAAGTGCTATTTGGTTTGCATCCAAACGGGTTCTTTGCACCACATTTATAATTTGTCCATTTTAGAAATCTTTCCTCTTT CTCTATTATTATCTGATCCATAAGATCTTTCTTTTCTGATGTGTTTGTACTTGCAGGCAAGTTCTACTGACATCAGAAAT CATGGTTTGCATTGGACTACTCCTAAGCTTCCATACAATAATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTA TCACATTTGTGTTTGCTGAAGTTCTTGAAGGTAATTTATTCTCATACTATATAGTAATAAATAAAACAAACATGGATAGA AGAATTCAGACAACTTTGCATCATCACCAGATAAAAACAACACTGCTTAAACTAATCTGATGACTATGAACAGGTACATA GTTTGTAACCACCATGCAATAAGTATTGGTTATGTTGTGGTATGAGGGTATATCTCAGGGTTATGGTATGAGAGGGGCAT GGTCATGGGCATATTTTTAAAACCACATTGGATGAGGAGCAAACCATATTAGTGAAGGACACCACATCTTTCACCCAAAA CCTTAAGGCAATGGGTGTATGAGTTCTTTCACTAACAAACTATTTATCACACCCATTTTTATTCAATGTTAGACTTCTTT ATTTTTTATTTTTATTTCTTGATCACATTTTAAGAATTCCTAACATATTGCACAAACAAAGTCTACCAATCTTTCGTGTA CTCTTCAATGTTACTAGTTCCGGTACCTAGACCAAATGATACAATACAAGCACAAGTTCCTAGATTCATGGAGATATAGA ACAACGTATAAGTTATCTTGCTTGCAGATCCACCATGTGAGTCTCCAACAATTTTTTAAATAATTACATATCCGATTTGA CCTATAAACAGCTTGGTGGTTTCTTATTGAGGATAAAAAAAGGGAACAAATGGATTGTTTTACAAGTTAACTGATAATTT ATATTGTCACTCATTGGCCATAAGTTAATAGTCTACTTTAAGTGATAATCTTTCAGGTTGATGCCTTTTCTTCCCATATG AGAAAGTTTTGGATCCATTTTTTTGCTTCATCATCCTTCGCTAGATAATGACATGCTTTGATATTTAATTTGTTTCTCAT CTTTTTCTGAAATCTGAAGAAGAAATTTGCTTCTTGAACATGGCTTCATATTTTGTTTGCTTGATCAATCCAGGAGTGAA CCTTTCACTTCTATCAAAAGTTATGTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGAGGATTACTGTCAACAGAAGCAG GAACTCTAGCACGAGTAATCGCAGATGCAACGATAACAATCGCGGGGTATCTGAGTGAAAGTAAACTCCTGAATGCCACC TTACTCCCTGCACTCCTCATCTGCATCTCATCCATTCTTGCTACCTGCTACACCTACAACTCTCTCTATTAG 

CDS sequence (LotjaGi1g1v0471200.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTGTGTTGATTCAGGTAATGTATGCTTTAACTTTTTACAGATATTACATCAACTATAAGTTAATGAAGAAGAAAGT CAAGAGATATACAGAACAAATAGAGTTTGGAGCTCAAAATCGTCACAATGTTCTCAGAGATTTCTCAATGCTTCTAGACA ATCAGGTAGAAAAAATTGTCTTGTTTCTGCTTGTACAACAAGGAGTACTTTCACATAGGCTATCCAATATTGGACAAGAG CACCAAACTCTTCTACAGCAGCCAAATAATACAAACATATCTGAACTCCAACAAGCATATCGTGACGTTGGCCAAGATCT TTTAAGGGTCCTTCATTTTGTGGAAATGAATGCTATTGGTCTGAGAAAGATCTTAAAGAAGTTTGATAAACGGTTCGGCT ACAAATTCACAGATTACTATATCAAGACGCGCGCAAATCATCCTTATTCCCAGTTAAGGCAGGTTTTCAGGCATGTGGGG ATTGGTGCTGTAGTTGGAGTTTTAACTCACAATCTTGCAGACCTTCAGGATTTACAACAGTGTCAAGGAAGCTACATTTC TATATATGACCAGCCTTCTTATGTTCATCAAGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATT CAACAAATTTCCTTCAGTTTCTGGGAAGAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTT CTTGATGAGAGATATCACTTCATGTCTCTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGT TGTGCCTACAGCAGACAACTACTCTTTGAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGGTTCAATGGCTG TTGCGCAGGTGTTCTCTTCGGTTTACTTTAGTGCGTGGTCAAACCGATCATATCTTAGACCACTCATCTTCAGTAGCATT GTTCTTCTAGTTGGAAACATCATGTATGCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTT CTGTGGGTTAGGCTCTGCAAGGGCCGTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCTT CAGCGGGTTTTGTTAGTGCAAGTGCTCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAAG ATTTACAAGTTCACCATGAATCAAGACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGTT GTGGACTTGTTTCCAGGAACCGTCTCGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGACAAGCAGTGC ATATTGCAGTTGAGAATGGGCATACACAACCTTTACTTATGAATTTAGAAGCAAAGGAGAAGGATGAAGACAGAGAAGAA GGAGAAGAAGAATATGATGATGCTAAAGAATCTCAGAAGCCTGTTACTTCTATTGTGATGGCATTTAAGTTACTCACCCC ATCGGTAAAGGTTCAATTATTTGTGTATTTTATGCTCAAGTATGCAATGGAGATCATACTTGCTGAATCAAGCCTTATTA CCGAATACTATTTCGTTTGGTCAACCAGCAAAGTAGCCATTTTCCTTGCATGCCTTGGTCTTACTGTGCTTCCTGTAAAT ATCATTGTAGGAAACTACATCAGCAACATGTTTGAAGAAAGGCAAGTTCTACTGACATCAGAAATCATGGTTTGCATTGG ACTACTCCTAAGCTTCCATACAATAATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTATCACATTTGTGTTTG CTGAAGTTCTTGAAGGAGTGAACCTTTCACTTCTATCAAAAGTTATGTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGA GGATTACTGTCAACAGAAGCAGGAACTCTAGCACGAGTAATCGCAGATGCAACGATAACAATCGCGGGGTATCTGAGTGA AAGTAAACTCCTGAATGCCACCTTACTCCCTGCACTCCTCATCTGCATCTCATCCATTCTTGCTACCTGCTACACCTACA ACTCTCTCTATTAG 

Protein sequence (LotjaGi1g1v0471200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIVLIQVMYALTFYRYYINYKLMKKKVKRYTEQIEFGAQNRHNVLRDFSMLLDNQVEKIVLFLLVQQGVLSHRLSNIGQE HQTLLQQPNNTNISELQQAYRDVGQDLLRVLHFVEMNAIGLRKILKKFDKRFGYKFTDYYIKTRANHPYSQLRQVFRHVG IGAVVGVLTHNLADLQDLQQCQGSYISIYDQPSYVHQDPVLDSIKVAVGRLSNSTNFLQFLGRGALIMQEELPTPSEDHL LDERYHFMSLLLNLANTFLYMVNTYIVVPTADNYSLNLGAAASVCGVVIGSMAVAQVFSSVYFSAWSNRSYLRPLIFSSI VLLVGNIMYALAYDMNSIAVLLAGRLFCGLGSARAVNRRYISDCVPLKLRMQASAGFVSASALGMACGPALACLLQTNFK IYKFTMNQDTLPGWVMAFAWLVYLLWLWTCFQEPSRENEGNYVPYRAQTGQAVHIAVENGHTQPLLMNLEAKEKDEDREE GEEEYDDAKESQKPVTSIVMAFKLLTPSVKVQLFVYFMLKYAMEIILAESSLITEYYFVWSTSKVAIFLACLGLTVLPVN IIVGNYISNMFEERQVLLTSEIMVCIGLLLSFHTIIPYSATQYVGSALITFVFAEVLEGVNLSLLSKVMSSRLSRGTFNG GLLSTEAGTLARVIADATITIAGYLSESKLLNATLLPALLICISSILATCYTYNSLY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 249 249 -
ProSiteProfiles 1 142 142 15.892
PANTHER 14 697 684 0.0
PANTHER 14 697 684 0.0
CDD 16 138 123 8.59931E-64
Pfam 86 142 57 1.5E-7
SUPERFAMILY 235 686 452 7.59E-27
TMHMM 245 267 23 -
CDD 247 433 187 2.99008E-22
Phobius 250 268 19 -
Pfam 256 630 375 5.5E-20
Phobius 269 279 11 -
TMHMM 274 296 23 -
Phobius 280 303 24 -
Phobius 304 314 11 -
TMHMM 311 333 23 -
Phobius 315 332 18 -
Phobius 333 337 5 -
Phobius 338 356 19 -
Phobius 357 376 20 -
Phobius 377 399 23 -
TMHMM 377 399 23 -
Phobius 400 410 11 -
Phobius 411 431 21 -
TMHMM 414 431 18 -
Phobius 432 512 81 -
Coils 471 491 21 -
Phobius 513 533 21 -
TMHMM 513 535 23 -
Phobius 534 544 11 -
Phobius 545 564 20 -
TMHMM 545 567 23 -
Phobius 565 575 11 -
Phobius 576 596 21 -
TMHMM 576 598 23 -
Phobius 597 601 5 -
Phobius 602 625 24 -
TMHMM 603 625 23 -
Phobius 626 674 49 -
TMHMM 670 692 23 -
Phobius 675 694 20 -
Phobius 695 697 3 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0471200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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