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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0471200 |
| Transcript ID | LotjaGi1g1v0471200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SPX domain-containing membrane protein; TAIR: AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; Swiss-Prot: sp|Q93ZQ5|SPXM3_ARATH SPX domain-containing membrane protein At4g22990; TrEMBL-Plants: tr|A0A151TBH1|A0A151TBH1_CAJCA Putative membrane protein family; Found in the gene: LotjaGi1g1v0471200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98166809..98173096) extracted from Lotus japonicus Gifu genome v1.2.
TATAAGGCCTCTTTTCTTGCTCTTGAATTTCAGGTAGAAAAAATTGTCTTGTTTCTGCTTGTACAACAAGGAGTACTTTC ACATAGGCTATCCAATATTGGACAAGAGCACCAAACTCTTCTACAGCAGCCAAATAATACAAACATATCTGAACTCCAAC AAGCATATCGTGACGTTGGCCAAGATCTTTTAAGGGTCCTTCATTTTGTGGAAATGAATGCTATTGGTCTGAGAAAGATC TTAAAGAAGTTTGATAAACGGTTCGGCTACAAATTCACAGATTACTATATCAAGACGCGCGCAAATCATCCTTATTCCCA GTTAAGGCAGGTTTTCAGGCATGTGGTAATGTCTCTAAATTCTAACCTTGTGTAATTTTTTTCTTCAAGTCATGTATGTA TCTTATTAAATGTTACAACACTAAAGTTACAAAAATGTAAGATTGTATCATGCAATAGCTTCTTTTTATATTGTTGGAAG CAATATCATGTAATTGCTTCTCTGCAGGGGATTGGTGCTGTAGTTGGAGTTTTAACTCACAATCTTGCAGACCTTCAGGA TTTACAACAGTGTCAAGGAAGCTACATTTCTATATATGACCAGCCTTCTTATGTTCATCAAGTTAGTTCTTGATTCAAAT TTATATGCATAACAATGCTAACTCCCTCAAATTCTCCAACTGTTCTTGTGTTTGCTGTAAATAACAATTCGAGGGAAACA AAAAGGAAGCATAGAGTTTGTTTATGAAATTTTGGTTAATAATTATCAATGGGCTTTCACACCATAAGTGTTGAGAAGTC CCGACTAAAGATATGACCCAATAAATGTTTATAAAGGGTAGAACAACCGTCACCTCTAAGCTAGCTTTTGAGGTTGAGTC AGGCCTAAACCAAATTTGAAAATGGTATCAGAGCCTTTATGACCAAGTAGTCTAGAGTTGAATCCTTTTTTCCCCCATTG TTGTAATAAAAAGTTGAATTTCAACACATGGTAGGTTGGTCTGTGTGCATTGTCATGCTTCAAGGGGGCTCTTGCGTGAG GGGGCTGTCAGAAACATAATATGAAACCATTTATGTGTGCTTTATATCCAATAACTTAAGTTTTTGGGATAGTTGATTAA TGAAATAAGCTTGTTTTATAATTCATAATATTAAAGATATTCTTGCAGCACTTGATGACAGTTTCATTCTGACTTATCTT AAAGGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATTCAACAAATTTCCTTCAGTTTCTGGGAA GAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTTCTTGATGAGAGATATCACTTCATGTCT CTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGTTGTGCCTACAGCAGACAACTACTCTTT GAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGGTTCAATGGCTGTTGCGCAGGTGTTCTCTTCGGTTTACT TTAGTGCGTGGTCAAACCGATCATATCTTAGACCACTCATCTTCAGTAGCATTGTTCTTCTAGTTGGAAACATCATGTAT GCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTTCTGTGGGTAAGCTATTTGTCTTACTCT AACTCCTCAATTTGACATGCTTTCCATATTGGAAGCTAATATTTGCTTCCTAGTTTCTAGATACATCAAAATTTGCAGAG CATTATATGTACTTTTTTTTGGCTTATCTTATTAAGAAAGCTTAGCTACTTCAGATTCTGGTATATTTTTATCATCACCT AGTGGAGCATAGACTTAAAAAGAATCAACTGTGTACGTATGATGTATGTGCATAGATATAGCATTGAACACAATGGATTA ATATAAACATTTATGAAATCAGTTATGTTCTAAATGAAAATAAACATTGGTAACTAAGATATTCTTATAATCCGGGTTAG GACTTACGCAACCCTATATTATATGCGAGGATTGCTCTACCTTATATAAGGATTTATTTAGACATATCTCTAGTCAATGT AAGACTTCTCAACACACTCCCTCTAGCCTATGACTGGACATTTTGAGCGTGTAGTTTGTAGCAGGACTGACATCTGCGAT TGACCAATTTATGGGTGGTCTCCAATAATCGGATCTAGGATAGTCTCTAATACCATCTTAGCATTCAAATATATTCTAGT ATCTGGTCTTTTTACCTAACTATGTTTCTTGTGTAAGAATAAAAAAATGCTATCATCCTCTTTCTTGACTAACCGCCTAA AAAGTATATAAAGGTGTGACTCAAAAGGGAGTTTCTTGCAGTTAGATTAGTTGAGTATAGTATACTATGTATGCATCTGA TATTCCGTATCAGAGAAATAAACTTAGATCTACAAAGAAAACATAGATGCATATAAGGACATATTTGTTTGGAAAAGGAA TTGCTAATTTTTGTTAACTTGACTTTGTTGATGTGGTCAATATATTGATATTGACCTTTTCAGGTTAGGCTCTGCAAGGG CCGTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCTTCAGCGGGTTTTGTTAGTGCAAGT GCTCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAAGATTTACAAGTTCACCATGAATCA AGACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGTTGTGGACTTGTTTCCAGGAACCGT CTCGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGTATGTCAGCAATGTTTCTTGTACTCTTTTACTTA CACGGATGTCACTAATTAAGAATGCAATATGCTTATGTTGTTTTATATTTCATTCTTAATTAGATTTTTTGCATTTGGTC TAAATGAATAGGACAAGCAGTGCATATTGCAGTTGAGAATGGGCATACACAACCTTTACTTATGAATTTAGAAGCAAAGG AGAAGGATGAAGACAGAGAAGAAGGAGAAGAAGAATATGATGATGCTAAAGAATCTCAGAAGCCTGTTACTTCTATTGTG ATGGCATTTAAGTTACTCACCCCATCGGTAAAGGTGAGAAACTCGTGATGACTTTTATGCAAATCTTTGAGAGTTTATGT AAATAGTTTCTAACGTATTTATAAGCCGTTTTGAGAATATTTTCATAAGCTTCCAAGATTAACTTATTAATATGGGTTTA AATTTCCTATAACATATTTTGAGCTTATTCCAATAAGCTTCTTAAACTCACCCTGACTAAGTGCTTATTGCCATACTGTT TACTCAAATTCACCCAAAATACACATTCAAGAATAGTAACTTGAATTGCTGAGTTTGAATTTACAAGGGATAAATATAGT TTCATTTAGATGATGTGATACACTAATAGTAAGAGATTTGGAATTTCAGTTAAAGGGTAAGCCTCAGTCAGATTTGTGAA AATATATTTATAGACTGTGATTCCGTGAAAGAACAAATTTAAATTTTTTCTTCATATCTGTTTTTTCTTTTTGAACCTTC TTCAAAATGAACATGAAAAAGTAGTCCTGTTAGTTATAATAGTATGAAGTATGACTCAATGTTTTGCACTAACTGTGGAT ATTTTTATCAGGTTCAATTATTTGTGTATTTTATGCTCAAGTATGCAATGGAGATCATACTTGCTGAATCAAGCCTTATT ACCGAATACTATTTCGTTTGGTCAACCAGCAAAGTAGCCATTTTCCTTGCATGCCTTGGTCTTACTGTGCTTCCTGTAAA TATCATTGTAGGAAACTACATCAGCAACATGTTTGAAGAAAGGTAGACCTTCAACTAATATCTTAAAAGTAAAAATTAAT TTGTAATACTCAGTATTTATGTTTTATGGCTAGAGGGACCGTTAAGAATGAACCATATTCCATTTAAAGTATACCAGACC TTTATTACACACACGAGCGCACACACACAGGCATATATGTTTGTGCTCGGCCTAACTCATCTCCAAAACCTAACTCATAA TGTGAGGATTGCCAAAGCCTTTATAACTTCAGTCATGTCTCTAGTTGATGTGAGATCTTAACACACTCCTTTTATGCCAT GGTTGAACATTTGGAGCGTGGAGTTTGTAAAACTGACTGCAATGAAGGTGGAAATTCAGGGGATGATCACAATGAAAGCC GAATTTTGGGTTCAATATTAGATCTAAAATAGACTCTGATATCGAGTTGGAAATGATGAAAACTTGGAGTTATTTATGAA TCATTCATGTCAAGAACCAATTATCCCAAAAACTTAAGCTATTGAGTAAAAGACTTTGAATGATTCTATATTATATTTCT AACACGCCCCCTCACGCAAGAGCTCACTTGGGCTTAAAGCGTTGACAATACACAACCCACCTGACATTCCACTTTTTATA TTAGAAGAATTTGTGGCGGCAAATATCGAACTCTAGACCACTAGTCATAGAGACTTTGATATCATGTCAAGAACCAATTA TCCCAAAAGAAAATACCCATGTCTTAAAAGTTAGCTGCTAAACTAATGATACAATAATAACTTCCAATTTAGACTTTATA ACAGCAAAAAAATTGTACTAAATTCCTAGGGATCCTCAAAATATCCACTGTGAACAGTTATTTAGTCTTTAATCCTCAAG CTCTAGGATTTGATTTTTATTAAGAAATCTTTTAAGTTGCTCATAGGTTGATGCACATTTTAGAAATAGACTTTGAGCCT TTAGATACAGGCTTATTTGTAGCTTGTATACTAGAAAAACACTAAATAAACTCCAATAAGTGCTATTTGGTTTGCATCCA AACGGGTTCTTTGCACCACATTTATAATTTGTCCATTTTAGAAATCTTTCCTCTTTCTCTATTATTATCTGATCCATAAG ATCTTTCTTTTCTGATGTGTTTGTACTTGCAGGCAAGTTCTACTGACATCAGAAATCATGGTTTGCATTGGACTACTCCT AAGCTTCCATACAATAATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTATCACATTTGTGTTTGCTGAAGTTC TTGAAGGTAATTTATTCTCATACTATATAGTAATAAATAAAACAAACATGGATAGAAGAATTCAGACAACTTTGCATCAT CACCAGATAAAAACAACACTGCTTAAACTAATCTGATGACTATGAACAGGTACATAGTTTGTAACCACCATGCAATAAGT ATTGGTTATGTTGTGGTATGAGGGTATATCTCAGGGTTATGGTATGAGAGGGGCATGGTCATGGGCATATTTTTAAAACC ACATTGGATGAGGAGCAAACCATATTAGTGAAGGACACCACATCTTTCACCCAAAACCTTAAGGCAATGGGTGTATGAGT TCTTTCACTAACAAACTATTTATCACACCCATTTTTATTCAATGTTAGACTTCTTTATTTTTTATTTTTATTTCTTGATC ACATTTTAAGAATTCCTAACATATTGCACAAACAAAGTCTACCAATCTTTCGTGTACTCTTCAATGTTACTAGTTCCGGT ACCTAGACCAAATGATACAATACAAGCACAAGTTCCTAGATTCATGGAGATATAGAACAACGTATAAGTTATCTTGCTTG CAGATCCACCATGTGAGTCTCCAACAATTTTTTAAATAATTACATATCCGATTTGACCTATAAACAGCTTGGTGGTTTCT TATTGAGGATAAAAAAAGGGAACAAATGGATTGTTTTACAAGTTAACTGATAATTTATATTGTCACTCATTGGCCATAAG TTAATAGTCTACTTTAAGTGATAATCTTTCAGGTTGATGCCTTTTCTTCCCATATGAGAAAGTTTTGGATCCATTTTTTT GCTTCATCATCCTTCGCTAGATAATGACATGCTTTGATATTTAATTTGTTTCTCATCTTTTTCTGAAATCTGAAGAAGAA ATTTGCTTCTTGAACATGGCTTCATATTTTGTTTGCTTGATCAATCCAGGAGTGAACCTTTCACTTCTATCAAAAGTTAT GTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGAGGATTACTGTCAACAGAAGCAGGAACTCTAGCACGAGTAATCGCAG ATGCAACGATAACAATCGCGGGGTATCTGAGTGAAAGTAAACTCCTGAATGCCACCTTACTCCCTGCACTCCTCATCTGC ATCTCATCCATTCTTGCTACCTGCTACACCTACAACTCTCTCTATTAG
CDS sequence (LotjaGi1g1v0471200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGCTATTGGTCTGAGAAAGATCTTAAAGAAGTTTGATAAACGGTTCGGCTACAAATTCACAGATTACTATATCAA GACGCGCGCAAATCATCCTTATTCCCAGTTAAGGCAGGTTTTCAGGCATGTGGGGATTGGTGCTGTAGTTGGAGTTTTAA CTCACAATCTTGCAGACCTTCAGGATTTACAACAGTGTCAAGGAAGCTACATTTCTATATATGACCAGCCTTCTTATGTT CATCAAGATCCTGTTCTTGATTCTATCAAAGTAGCCGTAGGGAGATTATCAAATTCAACAAATTTCCTTCAGTTTCTGGG AAGAGGTGCTCTTATCATGCAAGAGGAACTGCCAACTCCATCTGAAGATCATCTTCTTGATGAGAGATATCACTTCATGT CTCTTCTTTTGAACTTGGCAAACACATTTCTGTATATGGTCAACACTTACATTGTTGTGCCTACAGCAGACAACTACTCT TTGAACCTTGGAGCTGCAGCGAGCGTGTGCGGCGTGGTCATTGGTTCAATGGCTGTTGCGCAGGTGTTCTCTTCGGTTTA CTTTAGTGCGTGGTCAAACCGATCATATCTTAGACCACTCATCTTCAGTAGCATTGTTCTTCTAGTTGGAAACATCATGT ATGCATTGGCTTATGATATGAACTCAATAGCAGTTCTTCTGGCAGGACGTCTTTTCTGTGGGTTAGGCTCTGCAAGGGCC GTTAATAGGCGCTATATCAGTGACTGTGTGCCATTGAAACTTCGGATGCAAGCTTCAGCGGGTTTTGTTAGTGCAAGTGC TCTGGGAATGGCTTGTGGTCCAGCTCTTGCTTGTTTGTTACAGACTAATTTTAAGATTTACAAGTTCACCATGAATCAAG ACACTCTACCTGGATGGGTAATGGCTTTTGCATGGCTTGTTTATCTATTGTGGTTGTGGACTTGTTTCCAGGAACCGTCT CGCGAGAATGAAGGAAATTATGTGCCATATCGTGCACAAACTGGACAAGCAGTGCATATTGCAGTTGAGAATGGGCATAC ACAACCTTTACTTATGAATTTAGAAGCAAAGGAGAAGGATGAAGACAGAGAAGAAGGAGAAGAAGAATATGATGATGCTA AAGAATCTCAGAAGCCTGTTACTTCTATTGTGATGGCATTTAAGTTACTCACCCCATCGGTAAAGGTTCAATTATTTGTG TATTTTATGCTCAAGTATGCAATGGAGATCATACTTGCTGAATCAAGCCTTATTACCGAATACTATTTCGTTTGGTCAAC CAGCAAAGTAGCCATTTTCCTTGCATGCCTTGGTCTTACTGTGCTTCCTGTAAATATCATTGTAGGAAACTACATCAGCA ACATGTTTGAAGAAAGGCAAGTTCTACTGACATCAGAAATCATGGTTTGCATTGGACTACTCCTAAGCTTCCATACAATA ATCCCTTATTCAGCAACTCAATATGTAGGATCAGCCCTTATCACATTTGTGTTTGCTGAAGTTCTTGAAGGAGTGAACCT TTCACTTCTATCAAAAGTTATGTCGTCAAGGCTTTCTCGGGGAACCTTTAATGGAGGATTACTGTCAACAGAAGCAGGAA CTCTAGCACGAGTAATCGCAGATGCAACGATAACAATCGCGGGGTATCTGAGTGAAAGTAAACTCCTGAATGCCACCTTA CTCCCTGCACTCCTCATCTGCATCTCATCCATTCTTGCTACCTGCTACACCTACAACTCTCTCTATTAG
Protein sequence (LotjaGi1g1v0471200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNAIGLRKILKKFDKRFGYKFTDYYIKTRANHPYSQLRQVFRHVGIGAVVGVLTHNLADLQDLQQCQGSYISIYDQPSYV HQDPVLDSIKVAVGRLSNSTNFLQFLGRGALIMQEELPTPSEDHLLDERYHFMSLLLNLANTFLYMVNTYIVVPTADNYS LNLGAAASVCGVVIGSMAVAQVFSSVYFSAWSNRSYLRPLIFSSIVLLVGNIMYALAYDMNSIAVLLAGRLFCGLGSARA VNRRYISDCVPLKLRMQASAGFVSASALGMACGPALACLLQTNFKIYKFTMNQDTLPGWVMAFAWLVYLLWLWTCFQEPS RENEGNYVPYRAQTGQAVHIAVENGHTQPLLMNLEAKEKDEDREEGEEEYDDAKESQKPVTSIVMAFKLLTPSVKVQLFV YFMLKYAMEIILAESSLITEYYFVWSTSKVAIFLACLGLTVLPVNIIVGNYISNMFEERQVLLTSEIMVCIGLLLSFHTI IPYSATQYVGSALITFVFAEVLEGVNLSLLSKVMSSRLSRGTFNGGLLSTEAGTLARVIADATITIAGYLSESKLLNATL LPALLICISSILATCYTYNSLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 27 | 27 | 9.135 | ||
| Phobius | 1 | 134 | 134 | - | – | |
| PANTHER | 1 | 582 | 582 | 0.0 | – | |
| PANTHER | 1 | 582 | 582 | 0.0 | – | |
| SUPERFAMILY | 120 | 572 | 453 | 4.32E-27 | ||
| CDD | 132 | 318 | 187 | 1.87875E-21 | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 135 | 153 | 19 | - | – | |
| Pfam | 141 | 515 | 375 | 3.4E-20 | ||
| Phobius | 154 | 164 | 11 | - | – | |
| Phobius | 165 | 188 | 24 | - | – | |
| TMHMM | 166 | 188 | 23 | - | – | |
| Phobius | 189 | 199 | 11 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 200 | 217 | 18 | - | – | |
| Phobius | 218 | 222 | 5 | - | – | |
| TMHMM | 222 | 241 | 20 | - | – | |
| Phobius | 223 | 241 | 19 | - | – | |
| Phobius | 242 | 261 | 20 | - | – | |
| Phobius | 262 | 284 | 23 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 285 | 295 | 11 | - | – | |
| Phobius | 296 | 316 | 21 | - | – | |
| TMHMM | 299 | 316 | 18 | - | – | |
| Phobius | 317 | 397 | 81 | - | – | |
| Coils | 356 | 376 | 21 | - | – | |
| Phobius | 398 | 418 | 21 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 419 | 429 | 11 | - | – | |
| TMHMM | 430 | 452 | 23 | - | – | |
| Phobius | 430 | 449 | 20 | - | – | |
| Phobius | 450 | 460 | 11 | - | – | |
| Phobius | 461 | 481 | 21 | - | – | |
| TMHMM | 461 | 483 | 23 | - | – | |
| Phobius | 482 | 486 | 5 | - | – | |
| Phobius | 487 | 510 | 24 | - | – | |
| TMHMM | 488 | 510 | 23 | - | – | |
| Phobius | 511 | 559 | 49 | - | – | |
| TMHMM | 555 | 577 | 23 | - | – | |
| Phobius | 560 | 579 | 20 | - | – | |
| Phobius | 580 | 582 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0471200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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