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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0472200 |
| Transcript ID | LotjaGi1g1v0472200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphomannomutase; TAIR: AT2G45790.1 phosphomannomutase; Swiss-Prot: sp|Q1W376|PMM_SOYBN Phosphomannomutase; TrEMBL-Plants: tr|G7L3I4|G7L3I4_MEDTR Phosphomannomutase; Found in the gene: LotjaGi1g1v0472200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98270615..98275013) extracted from Lotus japonicus Gifu genome v1.2.
CCGTAATGCCCTTTCCTTCCCTCTTCCCTTCTCACCTGTCGAATCCCAATTATGCCCACGAAAGATTCTAGGATTGAAAT TGATGAAGATCTTGGCTTTTCCTTATTTCTGGTTCTGATTGTGATTCCGGAGGTAAGAAATTGGAGGTGGTTCTCACCCA GATCTTCAGCGCCCCTCATCTCATTCTCTCTAAATTGGTGGTCGGTGACGGCGGAGGAAGAGTTCCGGCACGGAGGCGGC AAAGCTCCGGTGGCGTGCTGCTCCGTGTTGGGTAGCAGGGTTACTTTCGTAAATTTCCTTTTTAATTTTTTTCAAGAGGT AACCATTACCGGTTATAACCGGTCAATTTTACTTTTGCATGCTGCAACATCTAGGGTGAAAGTGAAAGATTTTCTTGTTC ACGTTTGTCTACGTTGTTGTCTTTGTACGAGGCACATGTTTCTTCCTCTTGTTGGGTCCCACTCACTCTGAAGCTTCCTC TGCCTCGCTCGCAGATCTCAGCCAATATATAACACCAAACCCCATTCACGATCTGCTTCAACCTCTGTCTCTTTCATTCT TCCACAACCACACTCTCTTTCTCCCAGGCAAGTTTCACTTTTCAATTCCCATTCTGCATCTCTATAAGGTGTTCAATCAC CTGTTCTCATTATCTATCTCTTTTTTTCTTCTGGGTTTTGATTAAGAACTTAGAAGCATTGCAAAATTACTCAGGTGGTA TGTATTTGCTAAAGGGTATCATCAAAATTTGAAATTTGCATTGCTGTTTGTTACACAAGTTCCAACATTGTGCTCACAAA GTTGAATTCTTATGTTTAAATGTTTTATCTCTTGTGTAATTTGTGGGCTTGTTGATTTTTTATTTCCTTGATTATTTGAT GAAGCAAAAGTTCTTTTGAGAATTGTTGTCATTTCATTTGCAAGTATGATCATGTGTGTGTTTTGCTTGAAGCTTGATGA AAAGGTTCAAATTTTTGCAGGTTTGGGCCCTTAGCAATAAGCTATAATGGCTGTCGCGAAACCTGGTGTGATTGCTTTGT TTGATGTTGATGGGACTCTTACAGCTCCCAGAAAGGTATTTGTTTCTTCTGGAGCAAATGACGTGTGAAGTTATTTTGTA TTTTTATTGCAATCCATATATCAATGCAGTGATATGGTTCTGAATTCTAAATCAGATCTATTTTCTGTATGTTACTTGAT GTTTACTCACCAGATCACGCATAATAAATTGCGGTGATCCCTTTGCTGAATAAAACTTGAATATCTGTATTTTTTTCCTT TTGATTGTGTAGTCTTTGGATCACCTCTATTAACTGTTTTTTCACTCAAATGCTAGGTGGCTAATTCAGAGATGCTGGGG TTCATGCAAGAACTGCGGAAGGTGCGTGATCTGGATGTATTTTTGTTTTTTTAACATTACATGCATTTTATTTTTCGAAT CCTGATGTCCTTTATCTTCATCTCCCCTACTGTGCTAAACCTGTTCTTGGAGTTCTTTGTTCTTTTTATTTTGCTTGATT TTTCGCGTTGTCTGGCTACAGGTTGTAACAGTTGGAGTTGTTGGGGGGTCTGATCTCATAAAGATATCTGAGCAACTTGG CAGCACAGGTTAGCTATAAGTAGCTCCTTGGTTTCTGATGCTGCAATGTTTAAAACAATTAGGAAGCCACATGTTCACCT TTCTTATTCTTGTTTGTTGTCCAAAATTGGCTGAAGTAGAAGCTGATAATCATTGTTTTACAGTTTTCCTTTACATTCCT TTCTTTCTTCTTCCTTCTCATATTAGATAAGCTATTCATGTGAATTACAAAAGAAAGAAACAAAGAAATAGAAGGAATTA TAACCCAATTTGTCTGTTGCAGTTACCCATGACTATGATTATGTATTTTCTGAGAATGGTCTTGTGGCTCATAAGCAAGG AAAGCTCATTGGAACTGAGGTACACCTCAAACTCAATCCATAATAGAAGCAAATTGCCATGATCCAGGGTTTATGTGCTG ATCCTTTTGAGTTATTTAAAAGAACACAAGTGGCACTATGTTGTGACTTGTAGCTGAAGCCGGAATTATTAAAAATTCAC AAAGCTGAATGCTTTTTATAAAGTTTATAACTGAAATTATAGCCATTAGCAAAATCACTTCTCCCAGTCCACATACATAC TCCCTGTTGTTAAGCAAAACTTTTTTTCTCTTATACACTGACAAGTTGTGAGTTGCCCTCTTTTCAGAGTTTGAAGACAT TTCTAGGGGACGAAAAGCTCAAGGTAAGACTTAAATTTCCATTCCTATTCAATCCATCTTACATATTTGTAACTGAAGCT ACTATGACTAGGTTGTTACCTGCTCAGATATGCTTGACATAACATAACCTAAACAATGGCTAGAAAAATTAAGTTGATCT GTGATTTCATGAAGGGTAAGTGTAGAAGATATGTGAATAAAGGAGATTATACTTTTTTGTTCTGGTATTAAAATTCAATG AAGTTGTGAACATATAAAGAATAAATTTTATTTTAATCAATTCTGTTAATAACAACAGAATGGGGTATTTTTTTGCAGGA ATTTATTAACTTTACTCTGCATTACATTGCTGACTTGGATATCCCTATTAAGAGGTTAGTGAGATTCAGAAGTTAATCTC ACATTTGTTATTGGAAACTTTTAGTCCTAATCAATATAAGAACATTTTTAGGGGAACATTTATAGAGTTCCGTAGTGGGA TGCTGAATGTGTCACCAATTGGGAGAAACTGTAGCCAAGAAGAAAGAGATGAATTTGAGAAGTATGACAAGGTGATGTTT TTTTAGTTTTATCATATTTCCAAGAGCTTTCACTTCCTTTAATTTGAAATGCTGAGAGTATAATTTTATCCTAAAAGTTT GCAATTTAAGTTCTCAGGTTCAAAACATTCGCCCGAAAATGGTTTCTGTACTTCGTGAGAAGTTTGCTCATCTTAACCTG ACATTTTCTATTGGAGGACAGATAAGCTTTGACGTAAGTAATGATCTTCATTATGATATGTGACTTTATTGTTGTTCAAG TTATAGGCCAACAGGTCTTACTTTTTATATATTCTCCAAAGGTTTTTCCTCAAGGTTGGGACAAAACATACTGCCTGAGA TACCTTGATGCTTTCAATGAAATCCACTTCTTTGGTGACAAAACTTACAAGGTTAGTCCATAAATATATTATGCAGTATA TGTTTGGACTTTGGAGCATCAAATCAACATCTTATATTTTTCAACCTCCCTGCATAGGTTTGGTAGATCATTTTGTGTTC TATGGAGTCTTCATTTGCTTGATCCCCTTTTTTCTTTGTTTCAGCTATGTGATATATATTATAAATTTTATGAAAATCAT TCAAATGAGGGGTGGCAAAAACTATAGGTAGCAAGTAATTGTCATATTGACTCAGTTTTCTGGACACTGACAAATGACAT GAATCCTTTTTATTTCGGATCTTTGAAATTATTCAGCAAAAAAAAAACCTCTTGGACTTTTTCTGTTTATTGAAAACATT TGTAATTTTACTAACCTGCTGGGGCAATATTACCTGCAGAAACATTTTTAATTGTAATAACCTATTGGTCCATCACTTTG CAAAACTTCTTTAATGTTTGTGTGCTTTCACTGCATGATTTCTAGTTTCCATAAGCATTGTATAGGGCTGTAGGCCTAAA GATTGATCAATTTCGCGATTTATTTTTATTTTTATTTTCATGGAGCAGGGTGGGAACGACCATGAAATCTATGAATCTGA ACGGACTATTGGCCACACAGGTTAGTTGATTTGCTTTAACTTGAGTAATAGTATATGTAGATAACTGGATTTTGGTTTAA GTGGCACTTGGAAACAATTTGAGTTTGTAAATTTTCCAAGTCAATGTAAGTGAAAAGCTATTATTCTTGTAATCCTTATG ATTTATACTGTTGATCTTTTTCAGTTACCAGTCCTGAAGACACTATCAAGCAGTGTAAATCTTTGTTCCTAGAAAGTTAA GAATTTTTCACAGCAACATGTTACTGAGAAGTGGGAACAGAACGGAGCTAGTGTACTCAAATACATGGTTTACAGAAGAC CACAGGCTGCAAATATAATTCTTGTTTGTATTTTTATTATAGCACTTCATATTTTGGATTTAATATTAAGTTTATCATTC AGTTAAATGGATCTCGGTTAAAAATTTGAAACTACTCAAAATCATGGTTTACTTAATGATCAAGCCACCAATGCGCCAAC AAGTATAAGTGTATGTTTAAAAACTGTGAGTAGCTTTTGAGTTTCAAAATCAATTCGAGGATGCTATAAGTCGGAAGTAG GTATCGTAATGAAAAATCATTATTTTTCAGAAGTTGATTAAAAACAATAAAAATAAAACTATAGAAGGTAAAAGCAAAG
CDS sequence (LotjaGi1g1v0472200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTCGCGAAACCTGGTGTGATTGCTTTGTTTGATGTTGATGGGACTCTTACAGCTCCCAGAAAGGTGGCTAATTC AGAGATGCTGGGGTTCATGCAAGAACTGCGGAAGGTTGTAACAGTTGGAGTTGTTGGGGGGTCTGATCTCATAAAGATAT CTGAGCAACTTGGCAGCACAGTTACCCATGACTATGATTATGTATTTTCTGAGAATGGTCTTGTGGCTCATAAGCAAGGA AAGCTCATTGGAACTGAGAGTTTGAAGACATTTCTAGGGGACGAAAAGCTCAAGGAATTTATTAACTTTACTCTGCATTA CATTGCTGACTTGGATATCCCTATTAAGAGGGGAACATTTATAGAGTTCCGTAGTGGGATGCTGAATGTGTCACCAATTG GGAGAAACTGTAGCCAAGAAGAAAGAGATGAATTTGAGAAGTATGACAAGGTTCAAAACATTCGCCCGAAAATGGTTTCT GTACTTCGTGAGAAGTTTGCTCATCTTAACCTGACATTTTCTATTGGAGGACAGATAAGCTTTGACGTTTTTCCTCAAGG TTGGGACAAAACATACTGCCTGAGATACCTTGATGCTTTCAATGAAATCCACTTCTTTGGTGACAAAACTTACAAGGGTG GGAACGACCATGAAATCTATGAATCTGAACGGACTATTGGCCACACAGTTACCAGTCCTGAAGACACTATCAAGCAGTGT AAATCTTTGTTCCTAGAAAGTTAA
Protein sequence (LotjaGi1g1v0472200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVAKPGVIALFDVDGTLTAPRKVANSEMLGFMQELRKVVTVGVVGGSDLIKISEQLGSTVTHDYDYVFSENGLVAHKQG KLIGTESLKTFLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVS VLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDAFNEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTIKQC KSLFLES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 5 | 244 | 240 | 0.0 | – | |
| PANTHER | 5 | 246 | 242 | 1.7E-143 | ||
| PANTHER | 5 | 246 | 242 | 1.7E-143 | – | |
| SFLD | 5 | 244 | 240 | 0.0 | – | |
| CDD | 9 | 243 | 235 | 4.8335E-132 | ||
| Gene3D | 9 | 237 | 229 | 3.6E-105 | ||
| TIGRFAM | 10 | 226 | 217 | 8.4E-26 | ||
| SUPERFAMILY | 10 | 243 | 234 | 5.98E-60 | ||
| Pfam | 31 | 244 | 214 | 9.1E-108 | ||
| Gene3D | 87 | 188 | 102 | 3.6E-105 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphomannomutase activity | Catalysis of the reaction: alpha-D-mannose 1-phosphate = D-mannose 6-phosphate. | ||
| Biological process | GDP-mannose biosynthetic process | The chemical reactions and pathways resulting in the formation of GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate. |
Expression pattern of LotjaGi1g1v0472200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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