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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0472300 |
| Transcript ID | LotjaGi1g1v0472300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional protein FolD; TAIR: AT4G00620.1 Amino acid dehydrogenase family protein; Swiss-Prot: sp|O65271|FOLD4_ARATH Bifunctional protein FolD 4, chloroplastic; TrEMBL-Plants: tr|Q2PES9|Q2PES9_TRIPR Putative tetrahydrofolate synthase; Found in the gene: LotjaGi1g1v0472300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98275624..98279111) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAGCCACACTAGTTCCTTCCAGTAACATAACACCATTATTTTCTTCTTGTTCTTGTTCTTGTGCAAAGCAGGGAGA AGAGTACATTGATTGAACCAACAAACCACAACGTTCCAATGGCTTCTACTCTCTTCTTCACCAATTGCCACCTTTCTCCT TTTTCTTCCACCGCCGCCGCCGCCCTCCGCCGCCACCCCATCAGAGTGGCTCCCACCTCCCTCCGCTTCTTGGCCCTTCA CTCTGCTCCTTCTCAGTCATCCCGTGTTGCCGCCGTTGGTATAAAGTTCTCAACTTTCTTCTGCTTTTACTCTGTTAATG CAGTTTTTAGCTTCTGGGGTTTTATGGGTTTTGTTCTTTTTGAACTAGAACTGTTGGGCATGAAAAAAAAAAGGATCTTT TTGTTGTGGGTCTTGTGAAAAGTGGCTCTTTTGTTATTTGGGGTGTTACAATTTTACCATTAACTGCAAAACCCACTGCT GAGTCATTTTTTCTGCCCATCTTTAATACTCTAGGATTGATCAACTAGTGCATACATTCTGCTGGATTTACTCTCATGTT GATAATTTTTAGTTTGTGCATTTGGGTGTTGTTATATGGCTTTTTAGATGCATATGAACTATGTGGTTCCGGGGTGTGTT TTGTGACACTGCACCTATCAGGGTTTTAAACTGCAAATGCGGCCGCGAAGTTAAAGTGTTTTTGAGTCCCACAATGTCAT CACGACCAAAATTGTGGCCGCACCACCCATGTTAGTCTGCAAATCCGCGACAAAACTGCAACCACAGTTTAAAACCCTGA CACACCTGTGTCTTTGTAAGATGTCTTTTGTCTAAATTTTCTGCATATTAAATTTAAGGTGATGGTTTGTTTATTGAAGA ATTTGAGGCTTTATTAGTTGTTACTAGGTTGGATTACGATATTAGATTGTAGAAGGTATTTGATTCTTGAGAGGTTCATT TCTTCTTTTAATCAATAGTGAATTATTGTCATTACTTCATTTACTTGTAACTTTATATCGTAGGTTCTTGAGTTAACTAT GCCCATTTTTTCAGTGCCCACATATGTAATTCATATTCATGCACATGCCAATGTTTCTTTGCTCTGCGTTCTGTTGACTG AACATGGATTTGCTAAACTATGTTATCTTATGACTTTATGTACAGCTGCTATGGGTACCGAGGCTTCTGCAAAGGTGATT GATGGAAAATTAGTGGCAAAGCAAATCAGAGATGAGATAACAGCTGAAGTCTCTAGGATGAAAGAAGCCATTGGTGTGGT TCCAGGGTTAGCTGTAATCCTCGTTGGAGATAGGAAGGACTCTGCAACTTATGTGCGTAACAAGCAGAAGGCTTGTGAAG CTGCTGGAATAAATTCTTTGGAAGCATTTTTGCCAGAAGATTCCACTGAAGAAGAAGTTTTGAATTATATTTCAGGCTAC AATGAAGATCCTTCAGTTCATGGCATTCTTGTTCAATTACCTTTACCTTCTGTATGCTTCTAGATCTCTAACTTTATTTT CTTTTCAGGGTAAAGTATTATACATTAATAACTTGTTCTCATAGCTAAGTTTACTGTTACGTTGACTATAACTATATAAG TAACTTAATTTTTTTCATATGGAAGTTTAGTTAATTTTCCTTGCCATTGTGACAGCATATGAATGAGCAGAACATCTTGA ATGCTATTACAATTGAGAAGGATGTAGATGGTTTTCATCCATTGAATATCGGTCGTCTTGCAATGCGTGATAGAGAACCC CTGTTCGTTCCCTGTACACCAAAGGGATGCATAGAGTTACTCCGCAGATATGGTGTTTCTATCAAGGGAACGAGGGCTGT CGTGATTGGTCGGAGCAATATTGTAGGAATGCCAGCCGCTCTCTTGCTGCAAGTAATATCTCAATGGCTTTAGTTAACAG TGAAATTTGGTTTTACTTCAAAGTGATTGTTTGCTCCTTTCTTTTTTGCATCTATGTTTCTACTTCTTTATATATCTCTT ATGTGACTAGAGGGAAGATGCTACTGTCAGTGTCGTCCATTCAAAAACCCTAAACCCTGAAGAGATCATAAGACAAGCAG ATATTGTCATCTCGGCTGCTGGGCAACCACACATGGTTAGGGGAAGCTGGATAAAACCTGGTGCTGTCATTATCGACGTT GGAATCAACCCTGTAGAGGTGAATTACTTTTTTCGAGATCTCGTTGATAGTATGCTAGGGGTTTCTCTTGGTTATGTTTA GAGGAATAAATTCATAGTTAATACTTAAATTTCAATGTGAATGGTGTTTACTTAACCAATGCATATTTGAGTGTTTGTAA CAGGATCCAAATAGCACTCGAGGTTATAGATTGATCGGAGATGTTTGCTATGAAGAAGCCATAAAAGTTGCCTCGGCTGT GACACCAGTGCCTGGAGGAGTAGGTCCAATGACCATAGCAATGCTTCTCCAAAATACTCTTAACTCTGCAAAGAGGATCC ACAAGTTTGAATAACCTGGTGCAAGAATCTACATCATTATGAGCCATCAAGATGATATAAAACATCCTCTTCCATATACT TGTGTCTCGTGACGCAGAAATTTTTCTTAACTCATCAATATTTAGGCGTACTTAGAGAGTACTAAACTTGAAATGTTAGG CTGTTAGCGTAGACTCTAGTCAGATGCAAATAAAGCTCACGGTATTTTATTATAAGGTTTGGTTTGATGAAAAATTTATA AAAATAAATGACTATAACTGGTCTAGTTTCTTTCTTTGGCTTGTAGTATGTTTTTGAGTGCGAGTATTTTGAAGTATAGA ACTTGTGTTTTTCTCCCATGCTTTGGTTATAAGAAAAACCATTAGTATGCTTAACTGTTTGAGGTATTTGCATTGGCGTG AAGGGAAGTATATCAAGTGAGAGCAGGAGGTAAAAACATGATTTTGGTTAGGTTTGCTAAAATTTAATCTTGTCCATTCA TAGATAATGTTCTTAAGGTTAACTCCTCATATTCATTTGATACGCTTTGCTGCAAATCCTATATAACATTGAGTCTTATT ACATAAACATTACTTTCAAATGCATGAAATTTAGAACTATATTTTCCTATGTAACAATAAAAGATACAAATATGTTCAGC CTGAATTAGAGGTTTTGGAAACAAGTGAATGATCAACTTGGTCTCTAAAAGAGTTTTCCACCGGCAAGTTAGTGACTGGA AGTAAGGAAGACATTTGAAAGTCTCTAAATGTGTAAACATTTGTCAAGTCCGTTCCTACTTAGACTAATTTGACCAATGT TTTAGTTGTTACTAAATCTTAATTTGATCAATGTTTTAGTTGTGACTAAATCTTACTGTAGGGACTTACTTGACATACAT TTTACATATTCAAAGACTTTCAAACATAGTTTCTATCGACTAACTTAGCAGCTGCAAAATCTTGTTAGCCATTCACGCTT TTGGACACACACAAGTTGGTATGGAAACAAAAGGTTCTTGCACCTGAG
CDS sequence (LotjaGi1g1v0472300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTACTCTCTTCTTCACCAATTGCCACCTTTCTCCTTTTTCTTCCACCGCCGCCGCCGCCCTCCGCCGCCACCC CATCAGAGTGGCTCCCACCTCCCTCCGCTTCTTGGCCCTTCACTCTGCTCCTTCTCAGTCATCCCGTGTTGCCGCCGTTG CTGCTATGGGTACCGAGGCTTCTGCAAAGGTGATTGATGGAAAATTAGTGGCAAAGCAAATCAGAGATGAGATAACAGCT GAAGTCTCTAGGATGAAAGAAGCCATTGGTGTGGTTCCAGGGTTAGCTGTAATCCTCGTTGGAGATAGGAAGGACTCTGC AACTTATGTGCGTAACAAGCAGAAGGCTTGTGAAGCTGCTGGAATAAATTCTTTGGAAGCATTTTTGCCAGAAGATTCCA CTGAAGAAGAAGTTTTGAATTATATTTCAGGCTACAATGAAGATCCTTCAGTTCATGGCATTCTTGTTCAATTACCTTTA CCTTCTCATATGAATGAGCAGAACATCTTGAATGCTATTACAATTGAGAAGGATGTAGATGGTTTTCATCCATTGAATAT CGGTCGTCTTGCAATGCGTGATAGAGAACCCCTGTTCGTTCCCTGTACACCAAAGGGATGCATAGAGTTACTCCGCAGAT ATGGTGTTTCTATCAAGGGAACGAGGGCTGTCGTGATTGGTCGGAGCAATATTGTAGGAATGCCAGCCGCTCTCTTGCTG CAAAGGGAAGATGCTACTGTCAGTGTCGTCCATTCAAAAACCCTAAACCCTGAAGAGATCATAAGACAAGCAGATATTGT CATCTCGGCTGCTGGGCAACCACACATGGTTAGGGGAAGCTGGATAAAACCTGGTGCTGTCATTATCGACGTTGGAATCA ACCCTGTAGAGGATCCAAATAGCACTCGAGGTTATAGATTGATCGGAGATGTTTGCTATGAAGAAGCCATAAAAGTTGCC TCGGCTGTGACACCAGTGCCTGGAGGAGTAGGTCCAATGACCATAGCAATGCTTCTCCAAAATACTCTTAACTCTGCAAA GAGGATCCACAAGTTTGAATAA
Protein sequence (LotjaGi1g1v0472300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTLFFTNCHLSPFSSTAAAALRRHPIRVAPTSLRFLALHSAPSQSSRVAAVAAMGTEASAKVIDGKLVAKQIRDEITA EVSRMKEAIGVVPGLAVILVGDRKDSATYVRNKQKACEAAGINSLEAFLPEDSTEEEVLNYISGYNEDPSVHGILVQLPL PSHMNEQNILNAITIEKDVDGFHPLNIGRLAMRDREPLFVPCTPKGCIELLRRYGVSIKGTRAVVIGRSNIVGMPAALLL QREDATVSVVHSKTLNPEEIIRQADIVISAAGQPHMVRGSWIKPGAVIIDVGINPVEDPNSTRGYRLIGDVCYEEAIKVA SAVTPVPGGVGPMTIAMLLQNTLNSAKRIHKFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| Phobius | 14 | 21 | 8 | - | – | |
| Phobius | 22 | 353 | 332 | - | – | |
| PANTHER | 37 | 353 | 317 | 5.6E-188 | – | |
| PANTHER | 37 | 353 | 317 | 5.6E-188 | ||
| Hamap | 62 | 350 | 289 | 37.937 | ||
| SUPERFAMILY | 62 | 181 | 120 | 2.01E-41 | – | |
| Pfam | 64 | 180 | 117 | 1.6E-41 | ||
| Gene3D | 65 | 326 | 262 | 3.5E-111 | – | |
| Gene3D | 67 | 343 | 277 | 3.5E-111 | – | |
| PRINTS | 93 | 115 | 23 | 7.8E-83 | ||
| PRINTS | 134 | 161 | 28 | 7.8E-83 | ||
| ProSitePatterns | 135 | 160 | 26 | - | ||
| PRINTS | 169 | 190 | 22 | 7.8E-83 | ||
| CDD | 175 | 347 | 173 | 2.24825E-97 | ||
| SUPERFAMILY | 182 | 347 | 166 | 1.21E-54 | ||
| Pfam | 183 | 348 | 166 | 1.9E-67 | ||
| PRINTS | 216 | 236 | 21 | 7.8E-83 | ||
| PRINTS | 265 | 294 | 30 | 7.8E-83 | ||
| PRINTS | 306 | 322 | 17 | 7.8E-83 | ||
| PRINTS | 323 | 341 | 19 | 7.8E-83 | ||
| ProSitePatterns | 327 | 335 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Methylenetetrahydrofolate dehydrogenase (NADP+) activity | Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0472300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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