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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0489200 |
| Transcript ID | LotjaGi1g1v0489200.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thiamin pyrophosphokinase 1; TAIR: AT1G02880.2 thiamin pyrophosphokinase1; Swiss-Prot: sp|B9DGU7|TPK1_ARATH Thiamine pyrophosphokinase 1; TrEMBL-Plants: tr|K7KGB3|K7KGB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0489200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100213197..100220017) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGACAATGTGTCATTGTTCAAAGTTTCTTCTTCCACCACCGGAAGAACCCACCGCCGCCGCTCTTTCTCCGACCAC CACCACCACCACCACCACCACATACGCTCTAATTATTCTGAATCAAAGCCTCCCCAGATTTGCTCCTCTGCTTTGGGAAC ACGGTACTGCTCTGCTCTTTCATTCCTTCTCTATTTTTTCTTCATTCACGTTGATTTGGTTGCTAACTACCTACCTACCT ATTTGCAGCAAAGCTACGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATGCCTCTTTTCTTCCCTCATG AACAACCTTCCCATGTTCGCTCCAGGTTCCTACTTCTTCCCTCTTTTCCTTCCCCTACACTTCTAGGTTCTCTCGCTTTT AGTGGTCCAGGACAATTTGACAAAAAGAGTTTATGGTTGCAGATTTCCCATTATCTAACTTGCTAGATTTCTAATAGGTA CAAGCCTGATCTAATAAAAGGTGACATGGATTCAATCAGAAGAGAAGTGCTTGATTTCTATGCAACGCTGGTATCTCTAT CTATCTATATGCTTATGGTTTTTGTGTGTCAATGTGCATGTAATGAAGAAAGTTAGTTCAAAACTCAACTTTCTGGTTCA CACCAAATGACAATTATTCTGTTCCTATGTTACTGCTATTTACAAACTTGCATAAATCATATCAATGACTTATGCTTGTT TGCTTCCTGCAGGGAACTAAGATAATTGACGAGTCTCAGGATCAGGATACTACAGATTTACACAAATGTGTAGCTTACAT ACGTGACTCCACACCAAATGTTGATAAATCATCAGTAAGTTTTGAATACATGCTCATACTTTCATCATTTAATTTTCTTT TGCGAGGAGGACACACGGAGAGTGTAAAAGTTCACAGGATCACTATTAGTAATAAGTAGTAGTACAAGGACTATATTGTA ATAATATAGAAGTTCATTGTAAGCTGGCATGAGCTGGCATGTTAGTTACTGATTAGTTTAGAGTTTGTTAGGTTGTTATA TAATTAGTTAGTGTCTAATCTAGGTATAAATAGCTATCTACAGTGTTGTATTGCAATTCAGTTGAAATCAGAATATCAAA GTTTCTTCTTCTTCTTCAATCTCTCTCAATCTCTCTCAAGAGTTCTCACATTCTTTGATGGTATCAGAGCCCTAGATTGG GCTCTGCCATCACCAGCTTCCGCAGAAATGGTGCGAAACGCACAAATCAACAACAACAATGGAAATCAGCAAGCACATGT GGTTCAGGATCCAGCGCAAAATCCGATTTCGCCGTATTACATTCATTCCGGTGAAAATCCGTCGGCTACAATGGTATCTC CACCTCTCAATGGAAGGAATTACAGTGCCTGGGCTCGATCGATGAAGCGAGCACTTGTGGCGAAGAACAAGTTCAAGTTT ATCAATGGCGAAATTCCAGTTGCAGTACCTGGTGATGCCAACTACGATGCTTGGGATCGCTGCAACAGCTTGATCCATTC ATGGATACTCAATTCGGTAACTTCTACAATTGCTAATAGCATAGTTTTTGTTGAAAATGCTTGTGATGCTTGGAAGGATC TTCGTGATCGATTTTCTCAGGGAGATTTAGTGAGAATTGCTGAATTGCAAAATGAAATCAGTAGCTTAAAGCAAAATTCT ATGTCAGTAAACGATTATTACACTGAAATCAAAACTCTTTGGGAAGAATTGGAGCACTATCGACCAATACCTCAATGTAG ATGTACTGTTCCCTGTAGATGTGAAGCCATAGAGCAAGTAAAATTGTTTAGGGAGCAAGATAATGCTATTAGATTTCTTT TGGGACTGAATGAGAATTTTGGAGTTATTAAGTCTCAGATTTTGATGTCTAATCCTCTGCCATCCATAGCAAAAGTTGTT TCTTTAGCTATGCAACATGAAAGACAGTCAGATTTTGAAGAAAGTGATGAATCAAAGGTTATAGTGAATGTTGCAGAAGG AAGAAAGTCATATGGCAGGGGAAAAATGCCTAATTCTAGTTATTCTGGATACAAGGGTGCAGGAAAATTTTGTACCTATT GCAAGAAGCCTGGTCATATTATTGACATCTGCTATAAACTGCATGGTTATCCCAACACTTCCAATACTAAATTTGCTTCT AATTCCACTACTCATGTAAACAATGTCAGTGGAGGTAGTGGAGGTTATGATACAGAAGATGATCAAGGAGATGACTCAAT TCAAATAAAAGAGAGTGAAGAACCATTCACAGCTGATCAGTACAAAAGAATAGTGTCTATAATTCAACAAGTTGCTGGTT CATCAAAGAAAGTTGCAGAAACAGGACAAGTTGCAGTTAATCATGTGATCAGAACTACTAATCATAATTCAGGAACCACA GGGCATGGTAAGCATTTTGCTCTCTCTTGTTCACAAAAGTATGATAGTAGAGATTGGGTGATTGACTCAGGAGCTAGTGA CCACATTTGTTTTAACAAGTTGTGTTTTGAGACTCTAGCTGAAGTAAAGCCTATAAGCGTTAGTTTGCCAAATGGAACAA TCATAGATACCTGTTATGTAGGAACAGTTAGACTTACAAGTCTAATATTGTTAACTCATGTCTTATTTGTTCCTGAGTTT AGCTACAATTTAGTTTCAGTACATAAATTGGCAAAGAGAAATCATTGTGACATCATTTTTGGTGAATTCACTTGTGATAT TCAGGAGGTGCATTCCCAGAAGAGGATTGGTTTGGGTAGCTTGAAGGAAGACAAGTTATACCATTTAGTAGTTACAAGTC CTTCTAGTGTATGTTTTAGTGTTCAGCATTCTGTTTCTGAAATAAACAGCTCCACTCAGGTTATTCCACCTGGAGCTTTG TGGCATTTTAGGTTGGGACATTTGTCTCATGATAGGATTCAAGCTTTGAATAAATTCCATAGTTCAGTAAATATTAGTAG TTTACTAGTATGTGATATCTGTCATCTGGCCAAGCAGAAGAGGAAAATGTTCCCTGACAGTTTACATAATTCTAAGAATT GCTTTGACCTTGTGCACATGGACATTTGGGGGCCACTTGCTATTCCCTCAGTACATAATCACAAATATTTCCTTACTGTT TTGGATGATCACAGCAGATTTGTTTGGATAGTCTTGCTTAATAATAAAGGACAAGTTCAGCATCAGGTTCAGTCATTTGT GGCCATGGTACAATCTCAGTTTGGGCATACTGTTAAAGCTATTAGAACTGACAATGGGCCTGAGTTCATCATGCCATCTT TCTATTCTGCAAAGGGTATTCTACATCAGAGAAGTTGTATTCATACACCTCAGCAGAATGGGAGGGTAGAAAGGAAGCAT CAGCACATTCTGAACATAGCCAGAGCATTGCTTTTTCAGTCTAAATTGCCCAAGAAAATGTGGAGCTATGCTGTGTTACA TGCAGTCTTCCTTATGAACAGGATACCAAGCAAGCTGTTAAATGATAGGTCACCTTATCATTTACTTTATCAAGAGAAAG CAGATTTAGAGAGTTTAAAAGTGTTTGGATCACTATGTTTTGCTAGTACAATATCCTCTCAAAGATCTAAACTAGACCAA AGAGCCAGGAAGTGTGTCTTCTTGGGATTTAAGCAAGGTGTAAAGGGATTTGTTTTGCTAGACATATCTACTCATGAGAT CATAATTTCCAGAGATGTGGTGTTTCATGAACACATTTTACCTTATAAGAGTTCTACACTACCTACTTGGGAGTGTTTAG ATTTGCAAGCACAAGACAAGAAACCTGGAGATATTGAGAAGTCAGAAGTGCCACAATCTATACTTGAAAGTCAGATGCTG CAGAATGAAAAAGATTCTTCTGTTGTTCCAGAAGTGATTACTGATAATTCTCAGGCAGAAAGGCTAACTTTATCTCCTCA GACTGAGAATCTGAACTTGCAACATTCCATAGATCTTGATGCTACAGAGACAGAGAAAGAAGGGGAAGTTCCAAGTTTGA GAAGATCAAGTAGACAAGTAAAGAGGCCAGCTTTTCTACAAAATTTTCAATATAGTTCATTGCCTTCCAGAACTAGTACA GTACATAGCATCACACAGTACTATTCTCATGATAAACTCTCATCACCACATCAATCCTATGTACTTAGTATCTCATCAGA TAAAGAGCCTACTACTTTTGAAGAAGCTAATAAGCATTCCCACTGGCAAGAGGCTATGAAGGCAGAGATATTGGCTCTAG AGAGAAATGGAACCTGGAAATTGGTAGACTTACCAAATGGTGTAAAACCTATAGGGAATAAATGGGTTTACAGGATTAAG AGGAATGCAGATGGCACTTTAGCTAGATACAAAGCTAGGCTGGTAGCAAAAGGATATAATCAAGTTGAAGGACTGGATTA TTTTGACACTTTTTCTCCAGTTGCCAAACTCACCACTGTTAGAGTAATACTGGCCTTAGCAGCAGCACAGAACTGGCATT TGCATCAGCTGGATGTAGACAATGCATTTCTTCATGGAACTTTAGATGAAGATGTGTACATGCAAGTCCCGGCAGGAGTT TTGACAGAGAAGCCTAATCAAGTATGCAAGTTGCAAAAGTCACTTTATGGACTTAAGCAGGCTAGCAGGAAATGGTATGA AAAACTTGCTGCTCATCTTATACATCTTGGATACACACAAACTGCTTCAGATTACTCTTTATTTGTTAAATTTCAAGGAG ACATGTTCACAGGATTGCTTGTTTATGTGGATGATGTTATTCTGGTTGGTAACAGTCTCTTAGAATTTCAAATGGTTAAG GATTCTCTACATTCAGCATTTGGTATTAAAGATCTAGGTGTTTTGAAATATTTCCTTGGCCTAGAAGTAGCTCATTCTAC CTCTGGAATCTCATTGTGTCAAAGGAAATACTGTTTGGATTTGCTTCAAGAAACTGGAAATCTTGGTAGTAAGCCAGTTT CCACTCCATTGGATCCAGCTCTCAAGTTAACAATCGATCAAGGAAAACCTTGTGAAGATGTCATGGGATATCGCAGATTG GTAGGCAGATTGTTGTATTTGACACACACTAGACCAGATATTTCTTTTGCAACACAGCAACTGAACAGTTCATGAGCCAA CCTACTGATATACATTACACAGCAGCACTTAGAGTTTTAAAGTACTTGAAAGCATCTCCAGGACTTGGTTTGTTTTTTTC CAGTAACACTCCAATCACTTTACAAGGTTATTCAGATGCAGATTGGGCAGGTTGCTTGGATACGAGAAGGTCAATATCAG GGTACTGTTTTTATCTTGGTAATTCACTCATATCTTGGAAAGCAAAGAAGCAGGTCACAGTATCCAGGTCTTCTAGTGAA GCAGAATATAGAGCTCTTGCCTATGCCACTTGTGAACTACAATGGCTACTTTACTTGTTGAAAGACTTGAGAATTTCTTG TCTTAAAACACCTGCTTTGTTTTGTGATAACCAAAGTGCTTTGCATATTGCTGCCAATCCAGTGTTTCATGAAAGGACTA AACACTTGGAAATTGATTGCCATGTTGTCCGAGAGAAGTTGCAAGCTGGAGTTGTCAAGCTATTGCCTATTCCAACAGCT TTGCAAGTTGCAGATATCTTCACTAAAGCTTTGCAGCCTCGGATCTTTCAGGGATTTCTGGCTAAACTTGCAATGATCAA TATCTTTCCACCTTCAGCTTGTGGGAGGGTGTAAAAGTTCACAGGATCACTATTAGTAATCAGTAGTAGTACAAGGACTA TATTGTAATAATATAGAAGTTCATTGTAAGCTGGCATGAGCTGGCATGTTAGTTACTGATTAGTTTAGAGTTTGTTAGGT TGTTATATAATTAGTTAGTGTCTAATCTAGGTATAAATAGCTATCTACAGTGTTGTATTGCAATTCAGTTGAAATCAGAA TATCAAAGTTTCTTCTTCTTCTTCAATCTCTCTCAATCTCTCTCAAGAGTTCTCACATTCTTTGAGAGAGTGAACTGATG TCAATTTTAAATCTAGGCATAGATAGTTTTGGGATAATTGAAGTGAATCGAGTCTGGTGTAGTATCAGCCGTTATCTGTT TTTGATAGCAGAGAATTACTATAGATATGTATTTAGTTGTACAATTGAAAATTTGGAATTAATATCAGTTGTGCTCCCTG TCCCTTTAATAGCAGCTATGCGTTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGATCATGAGATTGGAAATATTAATGT GCTGTGCCGATTCTCCAACACACGAGTAATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCGAAGAATTATTCTC ACAAGATCTTTATTCAATCTTCGGTTGAGGGTCCGCATTGTGGACTCGTTCCCATCGGAATTCCATCAGGAAGTACTACT ACAACTGGGCTCCAATGGGACCTGAGTAAGTATTGTGTATAATTCTTTCATAATAATGCTGGTTCAATCCTGTAAGTCTA ACTGACTGGCTGAAGATTAGTAGGATGGTAATCATTGCTAGTGACATGCTATCATGAAATTTCAATTCTTGTGCGGCTGT TGTTAATCAGTAAATAGGATGGAATACTTTATCTTTAATTTCCTTTTTCAGTCATCCAGTTCTGATCTTGTTTGCCAGTG GAGTTTGATGATTAGCATTTTATTTGACTATTTCAGATAACACGGAGATGAGATTTGGAGGTCTAGTAAGCACATCAAAT ATCGTTAAAGAAGATATAGTAACAGTACAGTCGGATTCAGATCTTCTGTGGACTATTTCTATCAAGAAGCTCTAGGTTCT ACATGTTGCAAGGCTATTTGA
CDS sequence (LotjaGi1g1v0489200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACAATGTGTCATTGTTCAAAGTTTCTTCTTCCACCACCGGAAGAACCCACCGCCGCCGCTCTTTCTCCGACCAC CACCACCACCACCACCACCACATACGCTCTAATTATTCTGAATCAAAGCCTCCCCAGATTTGCTCCTCTGCTTTGGGAAC ACGCAAAGCTACGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATGCCTCTTTTCTTCCCTCATGAACAA CCTTCCCATATTTCTAATAGGTACAAGCCTGATCTAATAAAAGGTGACATGGATTCAATCAGAAGAGAAGTGCTTGATTT CTATGCAACGCTGGGAACTAAGATAATTGACGAGTCTCAGGATCAGGATACTACAGATTTACACAAATGTGTAGCTTACA TACGTGACTCCACACCAAATGTTGATAAATCATCACTATGCGTTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGATCAT GAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAGTAATCCTTCTATCTGATGATTGCCTCATTCACCT TCTTCCGAAGAATTATTCTCACAAGATCTTTATTCAATCTTCGGTTGAGGGTCCGCATTGTGGACTCGTTCCCATCGGAA TTCCATCAGGAAGTACTACTACAACTGGGCTCCAATGGGACCTGAATAACACGGAGATGAGATTTGGAGGTCTAGTAAGC ACATCAAATATCGTTAAAGAAGATATAGTAACAGTACAGTCGGATTCAGATCTTCTGTGGACTATTTCTATCAAGAAGCT CTAG
Protein sequence (LotjaGi1g1v0489200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
METMCHCSKFLLPPPEEPTAAALSPTTTTTTTTTYALIILNQSLPRFAPLLWEHAKLRVCADGGANRVFDEMPLFFPHEQ PSHISNRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSLCVLVAGALGGRFDH EIGNINVLCRFSNTRVILLSDDCLIHLLPKNYSHKIFIQSSVEGPHCGLVPIGIPSGSTTTTGLQWDLNNTEMRFGGLVS TSNIVKEDIVTVQSDSDLLWTISIKKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 266 | 265 | 4.8E-125 | – | |
| PANTHER | 2 | 266 | 265 | 4.8E-125 | – | |
| PIRSF | 14 | 267 | 254 | 9.6E-68 | ||
| SUPERFAMILY | 28 | 184 | 157 | 6.41E-48 | ||
| Gene3D | 32 | 266 | 235 | 1.1E-78 | ||
| CDD | 36 | 262 | 227 | 5.22552E-60 | ||
| TIGRFAM | 37 | 262 | 226 | 7.3E-60 | ||
| Pfam | 50 | 175 | 126 | 2.4E-40 | ||
| SUPERFAMILY | 184 | 266 | 83 | 5.75E-25 | ||
| SMART | 194 | 258 | 65 | 1.3E-9 | ||
| Pfam | 194 | 259 | 66 | 3.4E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Thiamine diphosphokinase activity | Catalysis of the reaction: ATP + thiamine = AMP + thiamine diphosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Thiamine metabolic process | The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. | ||
| Biological process | Thiamine diphosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle. | ||
| Molecular function | Thiamine binding | Interacting selectively and non-covalently with thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. |
Expression pattern of LotjaGi1g1v0489200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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