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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0489200 |
| Transcript ID | LotjaGi1g1v0489200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thiamin pyrophosphokinase 1; TAIR: AT1G02880.1 thiamin pyrophosphokinase1; Swiss-Prot: sp|B9DGU7|TPK1_ARATH Thiamine pyrophosphokinase 1; TrEMBL-Plants: tr|I3SYQ3|I3SYQ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0489200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100213702..100220017) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATTCAATCAGAAGAGAAGTGCTTGATTTCTATGCAACGCTGGTATCTCTATCTATCTATATGCTTATGGTTTTTGT GTGTCAATGTGCATGTAATGAAGAAAGTTAGTTCAAAACTCAACTTTCTGGTTCACACCAAATGACAATTATTCTGTTCC TATGTTACTGCTATTTACAAACTTGCATAAATCATATCAATGACTTATGCTTGTTTGCTTCCTGCAGGGAACTAAGATAA TTGACGAGTCTCAGGATCAGGATACTACAGATTTACACAAATGTGTAGCTTACATACGTGACTCCACACCAAATGTTGAT AAATCATCAGTAAGTTTTGAATACATGCTCATACTTTCATCATTTAATTTTCTTTTGCGAGGAGGACACACGGAGAGTGT AAAAGTTCACAGGATCACTATTAGTAATAAGTAGTAGTACAAGGACTATATTGTAATAATATAGAAGTTCATTGTAAGCT GGCATGAGCTGGCATGTTAGTTACTGATTAGTTTAGAGTTTGTTAGGTTGTTATATAATTAGTTAGTGTCTAATCTAGGT ATAAATAGCTATCTACAGTGTTGTATTGCAATTCAGTTGAAATCAGAATATCAAAGTTTCTTCTTCTTCTTCAATCTCTC TCAATCTCTCTCAAGAGTTCTCACATTCTTTGATGGTATCAGAGCCCTAGATTGGGCTCTGCCATCACCAGCTTCCGCAG AAATGGTGCGAAACGCACAAATCAACAACAACAATGGAAATCAGCAAGCACATGTGGTTCAGGATCCAGCGCAAAATCCG ATTTCGCCGTATTACATTCATTCCGGTGAAAATCCGTCGGCTACAATGGTATCTCCACCTCTCAATGGAAGGAATTACAG TGCCTGGGCTCGATCGATGAAGCGAGCACTTGTGGCGAAGAACAAGTTCAAGTTTATCAATGGCGAAATTCCAGTTGCAG TACCTGGTGATGCCAACTACGATGCTTGGGATCGCTGCAACAGCTTGATCCATTCATGGATACTCAATTCGGTAACTTCT ACAATTGCTAATAGCATAGTTTTTGTTGAAAATGCTTGTGATGCTTGGAAGGATCTTCGTGATCGATTTTCTCAGGGAGA TTTAGTGAGAATTGCTGAATTGCAAAATGAAATCAGTAGCTTAAAGCAAAATTCTATGTCAGTAAACGATTATTACACTG AAATCAAAACTCTTTGGGAAGAATTGGAGCACTATCGACCAATACCTCAATGTAGATGTACTGTTCCCTGTAGATGTGAA GCCATAGAGCAAGTAAAATTGTTTAGGGAGCAAGATAATGCTATTAGATTTCTTTTGGGACTGAATGAGAATTTTGGAGT TATTAAGTCTCAGATTTTGATGTCTAATCCTCTGCCATCCATAGCAAAAGTTGTTTCTTTAGCTATGCAACATGAAAGAC AGTCAGATTTTGAAGAAAGTGATGAATCAAAGGTTATAGTGAATGTTGCAGAAGGAAGAAAGTCATATGGCAGGGGAAAA ATGCCTAATTCTAGTTATTCTGGATACAAGGGTGCAGGAAAATTTTGTACCTATTGCAAGAAGCCTGGTCATATTATTGA CATCTGCTATAAACTGCATGGTTATCCCAACACTTCCAATACTAAATTTGCTTCTAATTCCACTACTCATGTAAACAATG TCAGTGGAGGTAGTGGAGGTTATGATACAGAAGATGATCAAGGAGATGACTCAATTCAAATAAAAGAGAGTGAAGAACCA TTCACAGCTGATCAGTACAAAAGAATAGTGTCTATAATTCAACAAGTTGCTGGTTCATCAAAGAAAGTTGCAGAAACAGG ACAAGTTGCAGTTAATCATGTGATCAGAACTACTAATCATAATTCAGGAACCACAGGGCATGGTAAGCATTTTGCTCTCT CTTGTTCACAAAAGTATGATAGTAGAGATTGGGTGATTGACTCAGGAGCTAGTGACCACATTTGTTTTAACAAGTTGTGT TTTGAGACTCTAGCTGAAGTAAAGCCTATAAGCGTTAGTTTGCCAAATGGAACAATCATAGATACCTGTTATGTAGGAAC AGTTAGACTTACAAGTCTAATATTGTTAACTCATGTCTTATTTGTTCCTGAGTTTAGCTACAATTTAGTTTCAGTACATA AATTGGCAAAGAGAAATCATTGTGACATCATTTTTGGTGAATTCACTTGTGATATTCAGGAGGTGCATTCCCAGAAGAGG ATTGGTTTGGGTAGCTTGAAGGAAGACAAGTTATACCATTTAGTAGTTACAAGTCCTTCTAGTGTATGTTTTAGTGTTCA GCATTCTGTTTCTGAAATAAACAGCTCCACTCAGGTTATTCCACCTGGAGCTTTGTGGCATTTTAGGTTGGGACATTTGT CTCATGATAGGATTCAAGCTTTGAATAAATTCCATAGTTCAGTAAATATTAGTAGTTTACTAGTATGTGATATCTGTCAT CTGGCCAAGCAGAAGAGGAAAATGTTCCCTGACAGTTTACATAATTCTAAGAATTGCTTTGACCTTGTGCACATGGACAT TTGGGGGCCACTTGCTATTCCCTCAGTACATAATCACAAATATTTCCTTACTGTTTTGGATGATCACAGCAGATTTGTTT GGATAGTCTTGCTTAATAATAAAGGACAAGTTCAGCATCAGGTTCAGTCATTTGTGGCCATGGTACAATCTCAGTTTGGG CATACTGTTAAAGCTATTAGAACTGACAATGGGCCTGAGTTCATCATGCCATCTTTCTATTCTGCAAAGGGTATTCTACA TCAGAGAAGTTGTATTCATACACCTCAGCAGAATGGGAGGGTAGAAAGGAAGCATCAGCACATTCTGAACATAGCCAGAG CATTGCTTTTTCAGTCTAAATTGCCCAAGAAAATGTGGAGCTATGCTGTGTTACATGCAGTCTTCCTTATGAACAGGATA CCAAGCAAGCTGTTAAATGATAGGTCACCTTATCATTTACTTTATCAAGAGAAAGCAGATTTAGAGAGTTTAAAAGTGTT TGGATCACTATGTTTTGCTAGTACAATATCCTCTCAAAGATCTAAACTAGACCAAAGAGCCAGGAAGTGTGTCTTCTTGG GATTTAAGCAAGGTGTAAAGGGATTTGTTTTGCTAGACATATCTACTCATGAGATCATAATTTCCAGAGATGTGGTGTTT CATGAACACATTTTACCTTATAAGAGTTCTACACTACCTACTTGGGAGTGTTTAGATTTGCAAGCACAAGACAAGAAACC TGGAGATATTGAGAAGTCAGAAGTGCCACAATCTATACTTGAAAGTCAGATGCTGCAGAATGAAAAAGATTCTTCTGTTG TTCCAGAAGTGATTACTGATAATTCTCAGGCAGAAAGGCTAACTTTATCTCCTCAGACTGAGAATCTGAACTTGCAACAT TCCATAGATCTTGATGCTACAGAGACAGAGAAAGAAGGGGAAGTTCCAAGTTTGAGAAGATCAAGTAGACAAGTAAAGAG GCCAGCTTTTCTACAAAATTTTCAATATAGTTCATTGCCTTCCAGAACTAGTACAGTACATAGCATCACACAGTACTATT CTCATGATAAACTCTCATCACCACATCAATCCTATGTACTTAGTATCTCATCAGATAAAGAGCCTACTACTTTTGAAGAA GCTAATAAGCATTCCCACTGGCAAGAGGCTATGAAGGCAGAGATATTGGCTCTAGAGAGAAATGGAACCTGGAAATTGGT AGACTTACCAAATGGTGTAAAACCTATAGGGAATAAATGGGTTTACAGGATTAAGAGGAATGCAGATGGCACTTTAGCTA GATACAAAGCTAGGCTGGTAGCAAAAGGATATAATCAAGTTGAAGGACTGGATTATTTTGACACTTTTTCTCCAGTTGCC AAACTCACCACTGTTAGAGTAATACTGGCCTTAGCAGCAGCACAGAACTGGCATTTGCATCAGCTGGATGTAGACAATGC ATTTCTTCATGGAACTTTAGATGAAGATGTGTACATGCAAGTCCCGGCAGGAGTTTTGACAGAGAAGCCTAATCAAGTAT GCAAGTTGCAAAAGTCACTTTATGGACTTAAGCAGGCTAGCAGGAAATGGTATGAAAAACTTGCTGCTCATCTTATACAT CTTGGATACACACAAACTGCTTCAGATTACTCTTTATTTGTTAAATTTCAAGGAGACATGTTCACAGGATTGCTTGTTTA TGTGGATGATGTTATTCTGGTTGGTAACAGTCTCTTAGAATTTCAAATGGTTAAGGATTCTCTACATTCAGCATTTGGTA TTAAAGATCTAGGTGTTTTGAAATATTTCCTTGGCCTAGAAGTAGCTCATTCTACCTCTGGAATCTCATTGTGTCAAAGG AAATACTGTTTGGATTTGCTTCAAGAAACTGGAAATCTTGGTAGTAAGCCAGTTTCCACTCCATTGGATCCAGCTCTCAA GTTAACAATCGATCAAGGAAAACCTTGTGAAGATGTCATGGGATATCGCAGATTGGTAGGCAGATTGTTGTATTTGACAC ACACTAGACCAGATATTTCTTTTGCAACACAGCAACTGAACAGTTCATGAGCCAACCTACTGATATACATTACACAGCAG CACTTAGAGTTTTAAAGTACTTGAAAGCATCTCCAGGACTTGGTTTGTTTTTTTCCAGTAACACTCCAATCACTTTACAA GGTTATTCAGATGCAGATTGGGCAGGTTGCTTGGATACGAGAAGGTCAATATCAGGGTACTGTTTTTATCTTGGTAATTC ACTCATATCTTGGAAAGCAAAGAAGCAGGTCACAGTATCCAGGTCTTCTAGTGAAGCAGAATATAGAGCTCTTGCCTATG CCACTTGTGAACTACAATGGCTACTTTACTTGTTGAAAGACTTGAGAATTTCTTGTCTTAAAACACCTGCTTTGTTTTGT GATAACCAAAGTGCTTTGCATATTGCTGCCAATCCAGTGTTTCATGAAAGGACTAAACACTTGGAAATTGATTGCCATGT TGTCCGAGAGAAGTTGCAAGCTGGAGTTGTCAAGCTATTGCCTATTCCAACAGCTTTGCAAGTTGCAGATATCTTCACTA AAGCTTTGCAGCCTCGGATCTTTCAGGGATTTCTGGCTAAACTTGCAATGATCAATATCTTTCCACCTTCAGCTTGTGGG AGGGTGTAAAAGTTCACAGGATCACTATTAGTAATCAGTAGTAGTACAAGGACTATATTGTAATAATATAGAAGTTCATT GTAAGCTGGCATGAGCTGGCATGTTAGTTACTGATTAGTTTAGAGTTTGTTAGGTTGTTATATAATTAGTTAGTGTCTAA TCTAGGTATAAATAGCTATCTACAGTGTTGTATTGCAATTCAGTTGAAATCAGAATATCAAAGTTTCTTCTTCTTCTTCA ATCTCTCTCAATCTCTCTCAAGAGTTCTCACATTCTTTGAGAGAGTGAACTGATGTCAATTTTAAATCTAGGCATAGATA GTTTTGGGATAATTGAAGTGAATCGAGTCTGGTGTAGTATCAGCCGTTATCTGTTTTTGATAGCAGAGAATTACTATAGA TATGTATTTAGTTGTACAATTGAAAATTTGGAATTAATATCAGTTGTGCTCCCTGTCCCTTTAATAGCAGCTATGCGTTC TTGTTGCTGGAGCACTTGGTGGGAGATTTGATCATGAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGA GTAATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCGAAGAATTATTCTCACAAGATCTTTATTCAATCTTCGGT TGAGGGTCCGCATTGTGGACTCGTTCCCATCGGAATTCCATCAGGAAGTACTACTACAACTGGGCTCCAATGGGACCTGA GTAAGTATTGTGTATAATTCTTTCATAATAATGCTGGTTCAATCCTGTAAGTCTAACTGACTGGCTGAAGATTAGTAGGA TGGTAATCATTGCTAGTGACATGCTATCATGAAATTTCAATTCTTGTGCGGCTGTTGTTAATCAGTAAATAGGATGGAAT ACTTTATCTTTAATTTCCTTTTTCAGTCATCCAGTTCTGATCTTGTTTGCCAGTGGAGTTTGATGATTAGCATTTTATTT GACTATTTCAGATAACACGGAGATGAGATTTGGAGGTCTAGTAAGCACATCAAATATCGTTAAAGAAGATATAGTAACAG TACAGTCGGATTCAGATCTTCTGTGGACTATTTCTATCAAGAAGCTCTAGGTTCTACATGTTGCAAGGCTATTTGA
CDS sequence (LotjaGi1g1v0489200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCAATCAGAAGAGAAGTGCTTGATTTCTATGCAACGCTGGGAACTAAGATAATTGACGAGTCTCAGGATCAGGA TACTACAGATTTACACAAATGTGTAGCTTACATACGTGACTCCACACCAAATGTTGATAAATCATCACTATGCGTTCTTG TTGCTGGAGCACTTGGTGGGAGATTTGATCATGAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAGTA ATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCGAAGAATTATTCTCACAAGATCTTTATTCAATCTTCGGTTGA GGGTCCGCATTGTGGACTCGTTCCCATCGGAATTCCATCAGGAAGTACTACTACAACTGGGCTCCAATGGGACCTGAATA ACACGGAGATGAGATTTGGAGGTCTAGTAAGCACATCAAATATCGTTAAAGAAGATATAGTAACAGTACAGTCGGATTCA GATCTTCTGTGGACTATTTCTATCAAGAAGCTCTAG
Protein sequence (LotjaGi1g1v0489200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSLCVLVAGALGGRFDHEIGNINVLCRFSNTRV ILLSDDCLIHLLPKNYSHKIFIQSSVEGPHCGLVPIGIPSGSTTTTGLQWDLNNTEMRFGGLVSTSNIVKEDIVTVQSDS DLLWTISIKKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 88 | 88 | 1.7E-24 | ||
| Gene3D | 1 | 85 | 85 | 1.7E-55 | ||
| CDD | 1 | 166 | 166 | 1.40978E-41 | ||
| Pfam | 1 | 79 | 79 | 8.6E-24 | ||
| TIGRFAM | 1 | 166 | 166 | 3.5E-44 | ||
| PANTHER | 1 | 170 | 170 | 1.2E-85 | – | |
| PANTHER | 1 | 170 | 170 | 1.2E-85 | – | |
| Gene3D | 86 | 166 | 81 | 1.7E-55 | – | |
| SUPERFAMILY | 88 | 170 | 83 | 2.09E-25 | ||
| Pfam | 98 | 163 | 66 | 1.4E-20 | ||
| SMART | 98 | 162 | 65 | 1.3E-9 | ||
| Coils | 168 | 171 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Thiamine diphosphokinase activity | Catalysis of the reaction: ATP + thiamine = AMP + thiamine diphosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Thiamine metabolic process | The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. | ||
| Biological process | Thiamine diphosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle. | ||
| Molecular function | Thiamine binding | Interacting selectively and non-covalently with thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. |
Expression pattern of LotjaGi1g1v0489200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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