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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0497100 |
| Transcript ID | LotjaGi1g1v0497100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cationic amino acid transporter; TAIR: AT1G05940.1 cationic amino acid transporter 9; Swiss-Prot: sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic; TrEMBL-Plants: tr|K7MUP2|K7MUP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0497100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101261216..101267791) extracted from Lotus japonicus Gifu genome v1.2.
CCCACCACAAAAAGAGGTTTTTGGTGGCAGTCAGAAGTGCCACCTTCTTCTAGTAGTTAACCTCTTACTAATGTGAGTAC CAGCATGGTCAGAGACAGTGAGACACCTTCATCTCAAAGCATTTCAGAGAAATCCATTACTATATATTTTCCAAACCATG TGTATCCAACAACCTTACCACAAAAAAGTCAATAACTACCATGAAGGTATCAATATTCTCAATCATTGACCCCACATTAT AATTTACACTTACCTCCTTCATGACTTTATATATCAACCACCATCACCATGTTATTTGATAGAGTGATTCTTTTTCTCCA ATCTTCATCTATGGAGGTAACAATGACTTCACCCATATCAAAACCACTAAATTCCTAGTCATTCAACTTTCCTACATTAT TATGGGATTGGCTGGTGCTGCTTCTCCTTCTTCTCCATCCTCATTATCATCATCTTATTGCTCCCGTTTTTGGTCCTCGG CACTCCGGTCCAAGCTCCTCGTGTCGCCGGCGGAGAAGGCCGCTCGTGACAGCTCCAGCAGCGGACTCTCCCGCCGCCTC GGTGTCCTCGACCTCCTGCTGCTTGGTATTGGTGCTTCCATTGGTGCCGGCATCTTCGTCATCACCGGAACCGTTGCTCG CGACGCCGGACCCGGTATGCCTCCAATTTAATTGAAATGGGCTGTTCAAATTTTCTGTCTAGTTTTGTTTTTGTTACTAT TTTCATCATGATCATCATTCTTCATGATCATTATAAATTTTGTGATTTTGCTAAGAAAAAAAGGCACAAATTATTGAAAT ATAGTAGAGATTAAACATTGGAAGTAAAAGAAAGAAGTATCTATGGCATTTCTGGCAATGGGAATCATTGAATGCTTGCT TGGTAAGGCTCATTCATGCCATGTAGCTTGATTGTTGACTTTGTTGTGTTTGCTATGTAGTAGTTTATCCATGAAATGTC TGGCAAGGGTACAGCTACTATTTCAAAGTTTCCAAGTGTGTATTAGTTTTTGAACACATGTTAAATACTATAAGTTATCT AATTATTATGTATTCTCCTACCCATGTTGGTGAAAATTCTATAAATTAAAGTAGAAAGTTGGAGGGTGTAGGCTAAGAGT ATATGTTGGTGGTGCCTGAAGACTGTCCTGTGTTTGATAGCAGCACTGCAACTATTTGAATTTTTCATGCTTGATAATTA ACATGTGAGATGTAACTCTTAGTTTGCAACTTTGAGAGGTTTAGTCATTCTTGATAATGATAAAAATGGGAAGGTTGTCA ATGAGAAATGAAAGCCACTGAATGCTGCTTGCTTGTCAAGGCTCATTCATGATTCATGCCTTGTAGCTGGGGTAGCTGGA TTGTTGACTTTATTGTGTTTGTTAGGCAGTAGTTTATGTAACGAATGTGGGATAGCTAAAATTTCGATTCAGTCTTTTGT AATTTTATAATGCAATCTGGAGGGTACAAATAGAACAAGTTTTCTCATTCCATTTTCCAAATTCTCTAATCTTTGCTAGG CATCATTAGGTAAAAGTGTATACATCTTTCTTCCTCTTCGGTTTTCGCTTTCTCCCTTCATGTTATTTATTTTCATACCC ACAATGGGTTAGTATCCGTGTTTCTACGGATATGTATGTGTCTTTGACAACAACATAGATTTTCTATGTTAGACTTCTTC TTCATGAAACTTGTATCCATCACAAATGGCTACTTTGCACCTCTTCAGAAGGGAGTACGACAGGGTATAAATTACTGTTT AGTTACATCTTGAGTAGTTACAAAATTTGATGGTTTCTTCAGCTTGCTTACATTTGCACTTCAGTCTTCTCTATTGTAAT GCTACTCGATGTGCTGAGACAGAACTATTCTTATTTCTTATTTTGAAAAATTGACCTTCATTCTGTATCTATTTATCTTT ATAACTGCTTTAAAATATCGGTCAGGACTTGTAATGGTTACTTTGCTTTTACCATTCCAAACTTAGTGGCTTATTCATGG TTTCTTTCTGTAATGCAGGAGTAACAATAAGTTTTATACTTGCGGGGGCATCCTGTGTTATAAATGCACTCTGTTTTGCT GAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGGGCATATCTATATGCATATACTGCTTTTAATGAACTTACAGCTTT TCTTGTTTTTGCACAATTAATGTTTGACCATCATATTGGAGCAGCTATAATAGCAAGAAGTTGTGCAAATTATTTGGTAG AATTTCTAGAGCTCTTCTCTTTTTTCAAAGATAACATTCCGAAATGGATTGGACATGGTGAAAGCATTGGAAACGTGCTA TCCATCAATGTCTTAGCTCCAATTCTCCTACTGCTTCTCACTTTTATTCTCTGTCGAGGTGTTCAAGAATCATCAGTTGT GAATTCGTTTATGACAGTGACCAAGGTTCCTTTCCATCTTATCCGTTATGACTTACCAGAATATAACATTAAGCATTGGA TGAGAGCTGGGGTTTATGTGAGAACAGAATCACAAGTTATTTTACTGTTTGTTGCAGGTAGTCATTGTTATTATTGTCAT TTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTGTAAAAAGCATATTTACAGGAG CTACTGTAGTCTTCTTTGCATGTATTGGATATGATGCAGTTGCCAATTGTGCTGAAGAATCTAAGAGGCCACAGGTATAT TATGTTTTGAGAGATTTCTCTGCTAGTTAATGAACTTTCCTGATGCCTTATGTGTTATTTAATGTTTATGTTGAGAACAA TAATGATGTTAGAAACAAACTAGTGACTACTAGGAGTTTTATGACTGCTGCTAGGTGCCATAGTTTATTGTATACACCTT GCCTTCAATTATCTTAGAAGTAAATAGTAACTATTCAGATTTAGTTGTAGTTACTAGTTACCACTTACCATCATAGTTAT AAATTAACTTCAGCTCATTTTGTAAATGTACTTGTACACGCGCATAGCAGTTTAACAGAAACTATCTGGCAATGGTATAT TTATTTTGTGTCTAATTTAAAGTCACGCTTTCCATTCTAACTTTTTCTCTTCTTTTTGTTGTCATGAATTAGTTGATGAT GTTTTTCTTTTTGGGTGTGTTTCTGAATTTTTAAGGGAGGGGAGCGTAAGGGAGGGGGAAGGAGGGCAAGCCCTTCCTTG TTTGGAAGTTCAAATCCCCCAATTTGGGGGGAAATAGAAAATATAACTAAAAGAGGGTCTTGGTGGGATCTTGGAGGGTA TTCGAAAATTCCCCAAACCCTTCCCCCTATTCGAAAAACTCACGGACAAGGGGAGGGCTTCTTGGAAGCCTTGCCCTTCC CTCCCCTCCCCTCCAAAACTCAACTCGCAAACCCACCCTTAATCTTTCTAATTTCTAACATTTCAGCGTGATTTGCCGAT AGGCATAATTGGAAGCCTCTTGGTTTGTGTTGCGTTGTACATTGGAGTATGCTTAGTGATTACTGGAATGGTTCCATACA ATCTCCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTTAAATCTAAGGGGTTAAAATTTGTTTCTGTTCTGATTAGCATT GGTGCTGTTGCTGGACTTATAACAACACTCCTTGTTAGTCTCTATGTTCAGGTGAATCACTTGTGAATTATGAATTTAAT TGATGTGCCTTGTGGCATGTGCTAATGTACATGATGTTTCTGTTGAGCAGTCTCGGCTATATCTTGGGCTTGGCAGGGAT GGTTTACTACCCCCATTATTTGCTAAAGTTCACTCCAAACGCCACATCCCCATTCATTCTCAGATTTGGGTTGGTTGTGT TGCTAGTGTTTTGGCTGGACTGTTGAATGTGCACATGCTCTCACACATTCTTTCTGTTGGTACACTGGTAAGTTTTGATT TCTTATTTCATGGTATTCAGGTTGTCAACAAAATATATGTATCCACATTATTTTGTATGATGTGGTGTCACATGACACTA TCATGTTGCAATTCTATATCTATCTTTCTCTTCAAATATTAAATAGTTTGAACCCTTTGAATATTTATGAAGGAAGAGAT AGACGGAAAGTTTCACATGACAATGTCATGTGGCATGATAAGATCCCGATCCCAGTGGTTGTTTAACATATATTCAGATA ACGTGCATCATCTTATCTATGTAGGGAATAATACAACATGGTGTACCTTGACATTGAGAAGAGTGTAATTGAACAATGTT TGCAAATATTTTTAGTTAATGCCCCTCACATGGTATTTGCACTTATTTCAGACTGGCTATTCCGTTGTTTCGGCATGTGT TGTTGTACTTCTCTGGAAGGATAAGACAAATAGTCAAGTATCACCTTCAGCAAAGAGGGAAGGTGTAATTTGCCTCATTG CTGTTGCTGTTTCTGGATTTATTGGGGGGCTTTTTTTCCGCTATGATGCTTCACCTATTTTGCTGATTCTGGCTATACTT GTTGGAGCTGGTGCTTCTACTGCTCTTCATTTCCGCCAGGTGAGTGTTCTTTTGCATTTTATTAACTGTTTGTTGCCTGG ACTCCTTCAATACGCTTTTGTTAAAAAATAATTAATTTGATATAACATGGCATAGAATACTAGTTGAAAGCATTAAGGGA TATCTAGTTATAAAGTAATTCTGCTTTAGTACAGGAGGGAAAGTAGTTTGCTGCCTTCTTCTTTCCTGGATCATGTAACA CAAGCAATATCCCATACATTACACCAGTATTTTTGTGATATATAAAACATTAAGTTAAAAAATATTTCAAAGGTTCATGT GACTGATAAAAAGATTACTTTCATGGTTATATAAACCTAAACTGAAGTTATGGACATTTAAACTTTGTAATTTATAGTAT CTTAAAATTTATTTTAATGACTATTTGCAATATTTATATTTAACATTGGTTGAAGATTTTTTAAAGCACTACTTAAAGAA ATTAGAAAAAGTAGAAACCTTCTTTGATTGAATAACTAATCAAAGGTAAAATTAGTATTGATTTGATTCCATGTAATATG CAACTTCAGCATGCATATCACAACATGGCAAAGACACGTGGCTTGTCGAGAAGGGGAATATGAAATGATTTCATGAGAAT AAGATCAAGTACTGAGGTTGTCTCATATGCTCAGCAATGGTGACTCAAATTTATTATATATAAGGGCGGATAACAAGCAC AATATGGGTTGAAAACCAATCTTAAGGCAAACATGGGGTGTAAGCAGGTTTGGGCCAACTCGCGAATCTGATCAACCCGA CTTGATCCAAGTAAAATTGTAGCTCGGTTTTGGCAGGATAGAAAGGAAAAGATTCTTGATCAAAGTGATGTTAGGTTTTG GGTCAAGAAAATTGAGCTAAGGCCTCGAACAAATCATTTTAAAAAAAATTATTTTATATATTCTAAAATCAAAATTGATC TTTAATTGGTTTGGATCTATTTTCCCTCAAATCTGACCTTACCTGATTACACCTCTATGGCCAACCAACAGTTTTGCTAA GCTTCCCGGACCTCTTAACTTAAAATTTTGTGAAATTCATGTGTGTTGCATTGCATTGATGTTATTTCCTCTTCATTAAT TCCTTTCTGTTCTATCATTTTTGCTTTTCAGGTTTATGCCGAAGATTTACCAGGGTTTTCTTGCCCTGGGGTTCCCCTTG TGCCAAATGTTTGCATCTTTTTCAACATGTTCTTATTTGCCCAGGTATGCCCATGCTACTTTTGACAAATTAGCCAGAAT AGTACTATATCTTTTTTTTTGGTTACAGGAGGAAGAGTGAATAGTACTATATCTGAAAAGACTAAAGTTAATAATTTTAA TATTTATTCATCAAACTGACATGATGATGAACTTCTGTTGACAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTT AGTGTTGTCATGGTTGGTCTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATACTGTTTATCA TGAGGCACCAGAGGAAGATGGTCGATGAGTTATCAGTTCAATATTATAAACAATGCGGTTTTCATTATGGCCAATGGGGA GAAGGGGGTGTTGGTTAAACTGTATGTAGCAAATAAGCTATTTGTTCTTTCTGTTAGGAATGTGAATGTCCATCAGGTCT AGTTAGATTGTATATGGAACTGTCAGCAAGCATAATATCCATTAGGGGTTTAAATTGAGGTTGTAGTCGTGGTTATGTTG CAAAGAAGTGCAGGTTGGTGCGGCTACAATAGCGGTCGTGTTGCCGTTGTTGGGACTCAAAAACCCTTTTACATTGCGGC AGCAATTGTGTCAGGACCGCAATTTGAAATCCTGCTTTCCCTCAAATGGCTCCTCCTTTCAACCCCAAGTCGAACATATG TATGATGTATCTCTTGTAGTTTACAACTTAGTTGAAAAGAAAATTATCATGTACCATTTTCATATGTGAATGTTCAGTTG ATACTTTTTGATGTGTTCGTGCCTTACATTTTTTCTGTTTTTTTTTTTTCAATGTATATAATATTTTAGTTTAATATCAA GCATCAAATCATGTTT
CDS sequence (LotjaGi1g1v0497100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTGGCTGGTGCTGCTTCTCCTTCTTCTCCATCCTCATTATCATCATCTTATTGCTCCCGTTTTTGGTCCTCGGC ACTCCGGTCCAAGCTCCTCGTGTCGCCGGCGGAGAAGGCCGCTCGTGACAGCTCCAGCAGCGGACTCTCCCGCCGCCTCG GTGTCCTCGACCTCCTGCTGCTTGGTATTGGTGCTTCCATTGGTGCCGGCATCTTCGTCATCACCGGAACCGTTGCTCGC GACGCCGGACCCGGAGTAACAATAAGTTTTATACTTGCGGGGGCATCCTGTGTTATAAATGCACTCTGTTTTGCTGAGCT AGCTTCTCGATTTCCTGCTGTTGTTGGAGGGGCATATCTATATGCATATACTGCTTTTAATGAACTTACAGCTTTTCTTG TTTTTGCACAATTAATGTTTGACCATCATATTGGAGCAGCTATAATAGCAAGAAGTTGTGCAAATTATTTGGTAGAATTT CTAGAGCTCTTCTCTTTTTTCAAAGATAACATTCCGAAATGGATTGGACATGGTGAAAGCATTGGAAACGTGCTATCCAT CAATGTCTTAGCTCCAATTCTCCTACTGCTTCTCACTTTTATTCTCTGTCGAGGTGTTCAAGAATCATCAGTTGTGAATT CGTTTATGACAGTGACCAAGGTAGTCATTGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGG TCTCCCTTTGCTCCAAATGGTGTAAAAAGCATATTTACAGGAGCTACTGTAGTCTTCTTTGCATGTATTGGATATGATGC AGTTGCCAATTGTGCTGAAGAATCTAAGAGGCCACAGCGTGATTTGCCGATAGGCATAATTGGAAGCCTCTTGGTTTGTG TTGCGTTGTACATTGGAGTATGCTTAGTGATTACTGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCTTTGGCT GAAGCTTTTAAATCTAAGGGGTTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTGTTGCTGGACTTATAACAACACT CCTTGTTAGTCTCTATGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGTTTACTACCCCCATTATTTGCTAAAG TTCACTCCAAACGCCACATCCCCATTCATTCTCAGATTTGGGTTGGTTGTGTTGCTAGTGTTTTGGCTGGACTGTTGAAT GTGCACATGCTCTCACACATTCTTTCTGTTGGTACACTGACTGGCTATTCCGTTGTTTCGGCATGTGTTGTTGTACTTCT CTGGAAGGATAAGACAAATAGTCAAGTATCACCTTCAGCAAAGAGGGAAGGTGTAATTTGCCTCATTGCTGTTGCTGTTT CTGGATTTATTGGGGGGCTTTTTTTCCGCTATGATGCTTCACCTATTTTGCTGATTCTGGCTATACTTGTTGGAGCTGGT GCTTCTACTGCTCTTCATTTCCGCCAGGTTTATGCCGAAGATTTACCAGGGTTTTCTTGCCCTGGGGTTCCCCTTGTGCC AAATGTTTGCATCTTTTTCAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTTAGTG TTGTCATGGTTGGTCTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATACTGTTTATCATGAG GCACCAGAGGAAGATGGTCGATGA
Protein sequence (LotjaGi1g1v0497100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLAGAASPSSPSSLSSSYCSRFWSSALRSKLLVSPAEKAARDSSSSGLSRRLGVLDLLLLGIGASIGAGIFVITGTVAR DAGPGVTISFILAGASCVINALCFAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMFDHHIGAAIIARSCANYLVEF LELFSFFKDNIPKWIGHGESIGNVLSINVLAPILLLLLTFILCRGVQESSVVNSFMTVTKVVIVIIVIFAGAFEVDVSNW SPFAPNGVKSIFTGATVVFFACIGYDAVANCAEESKRPQRDLPIGIIGSLLVCVALYIGVCLVITGMVPYNLLGEDAPLA EAFKSKGLKFVSVLISIGAVAGLITTLLVSLYVQSRLYLGLGRDGLLPPLFAKVHSKRHIPIHSQIWVGCVASVLAGLLN VHMLSHILSVGTLTGYSVVSACVVVLLWKDKTNSQVSPSAKREGVICLIAVAVSGFIGGLFFRYDASPILLILAILVGAG ASTALHFRQVYAEDLPGFSCPGVPLVPNVCIFFNMFLFAQLHHEAWVRFVILSVVMVGLYAIYGQYHADPSAEENTVYHE APEEDGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 57 | 57 | - | – | |
| PANTHER | 8 | 562 | 555 | 8.2E-283 | – | |
| PANTHER | 8 | 562 | 555 | 8.2E-283 | – | |
| Gene3D | 49 | 493 | 445 | 1.0E-106 | – | |
| Pfam | 53 | 464 | 412 | 9.8E-49 | ||
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 58 | 79 | 22 | - | – | |
| Phobius | 80 | 84 | 5 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 85 | 108 | 24 | - | – | |
| Phobius | 109 | 119 | 11 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 120 | 140 | 21 | - | – | |
| Phobius | 141 | 180 | 40 | - | – | |
| Phobius | 181 | 203 | 23 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 204 | 209 | 6 | - | – | |
| Phobius | 210 | 231 | 22 | - | – | |
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 232 | 250 | 19 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 251 | 272 | 22 | - | – | |
| Phobius | 273 | 283 | 11 | - | – | |
| Phobius | 284 | 310 | 27 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| Phobius | 311 | 329 | 19 | - | – | |
| Phobius | 330 | 353 | 24 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 354 | 385 | 32 | - | – | |
| Phobius | 386 | 404 | 19 | - | – | |
| Phobius | 405 | 409 | 5 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Phobius | 410 | 428 | 19 | - | – | |
| Phobius | 429 | 443 | 15 | - | – | |
| TMHMM | 443 | 462 | 20 | - | – | |
| Phobius | 444 | 462 | 19 | - | – | |
| Phobius | 463 | 467 | 5 | - | – | |
| Phobius | 468 | 487 | 20 | - | – | |
| TMHMM | 469 | 487 | 19 | - | – | |
| Phobius | 488 | 498 | 11 | - | – | |
| TMHMM | 497 | 519 | 23 | - | – | |
| Pfam | 498 | 547 | 50 | 3.8E-15 | ||
| Phobius | 499 | 519 | 21 | - | – | |
| Phobius | 520 | 524 | 5 | - | – | |
| Phobius | 525 | 543 | 19 | - | – | |
| TMHMM | 526 | 548 | 23 | - | – | |
| Phobius | 544 | 567 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0497100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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