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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0501100 |
| Transcript ID | LotjaGi1g1v0501100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G35710.1 kinase family with leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710; TrEMBL-Plants: tr|A0A151UBJ2|A0A151UBJ2_CAJCA Putative LRR receptor-like serine/threonine-protein kinase At4g08850; Found in the gene: LotjaGi1g1v0501100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101776378..101777504) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGAAGCAGAGGTGCCAGCTTTGGATGCGAGTTTTAGAAATGAAATTAAGGTGTTATCAGAAACAAGGCATCGTCATA TTGTGAAGCTTTATGGATTCTGCTTGCACAGAAGAATCATGTTTTTGATCTATCAATACTTGGAGAGAGGAAGCTTATTC TCTGTCTTGTATGATAATGCGGAAGCAATGGAATTGGATTGGAGAAAGAGGGTTAACATTATAAAAGGTGTTGCTCATGC TTTGACATATCTTCATCATGATTGCATCCCTCCAATAGTTCATAGAGACATATCTTCCAGCAATATCTTACTTAACACGG AGTGGCAGCCTAGTGTTTCTGATTTTGGCACAGCCCGAATCCTCAAACACAATTCATCCAATAGAACTATAGTTGCTGGA ACCATTGGATATATAGCTCCAGGTAAAAAAAATTATTTTCTTTTATACTTATAGCACCTTTTGCTTTTCCCTATGACCTC TTATTTATATGATTGTGTGCAGAGCATGCCCAATCCTGACATATAATTACAAGTAGGTGGATTAGGATAAGCTTTTATTT TGAAGCTATAGAACTTGAAGATTTTGTTTAATCAAGTTAATCTTTAACTACTTTTGTTAGAAACCTATAATATATTCATG CTCATATGATGAATGCAGAGCTTGCCTATACTATGGTTGTGAGCGAAAAGTGTGATGTCTATAGCTTTGGAGTGGTGGCG CTCGAAACTTTCGTAGGAAAGCATCCTAAGGAATTACTATCATCACTACAATCAACATCAAATGAAGACATCACATTATG TGAAATACTAGACCCACGCCTTCCATTTCCAGGGATGACTGCTGCTTTACATGACATAGTTCAGGTTGCCATTGCGGCAT TTGCATGCTTAAGTCCCAATCCTTCTTCTCGACCAACAATGAGATGTGTGTCTCAGTATTTTCTTTCTCGGCTAACACCA TTAAGCATTCCTCTACGTGAAATTACATTACAGCAGCTCATGGCTCAAGAACTCCGTCATTTAGAGTTGCCAACTCTTGA AATCGAAATTTCAAACTGAAGTTGACGCTATCACCATTTAGTGAAGACAGCTCTGACCAAGTTTATCTTAATGAACTATT GTGTGAC
CDS sequence (LotjaGi1g1v0501100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTTGATCTATCAATACTTGGAGAGAGGAAGCTTATTCTCTGTCTTGTATGATAATGCGGAAGCAATGGAATTGGA TTGGAGAAAGAGGGTTAACATTATAAAAGGTGTTGCTCATGCTTTGACATATCTTCATCATGATTGCATCCCTCCAATAG TTCATAGAGACATATCTTCCAGCAATATCTTACTTAACACGGAGTGGCAGCCTAGTGTTTCTGATTTTGGCACAGCCCGA ATCCTCAAACACAATTCATCCAATAGAACTATAGTTGCTGGAACCATTGGATATATAGCTCCAGAGCTTGCCTATACTAT GGTTGTGAGCGAAAAGTGTGATGTCTATAGCTTTGGAGTGGTGGCGCTCGAAACTTTCGTAGGAAAGCATCCTAAGGAAT TACTATCATCACTACAATCAACATCAAATGAAGACATCACATTATGTGAAATACTAGACCCACGCCTTCCATTTCCAGGG ATGACTGCTGCTTTACATGACATAGTTCAGGTTGCCATTGCGGCATTTGCATGCTTAAGTCCCAATCCTTCTTCTCGACC AACAATGAGATGTGTGTCTCAGTATTTTCTTTCTCGGCTAACACCATTAAGCATTCCTCTACGTGAAATTACATTACAGC AGCTCATGGCTCAAGAACTCCGTCATTTAGAGTTGCCAACTCTTGAAATCGAAATTTCAAACTGA
Protein sequence (LotjaGi1g1v0501100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLIYQYLERGSLFSVLYDNAEAMELDWRKRVNIIKGVAHALTYLHHDCIPPIVHRDISSSNILLNTEWQPSVSDFGTAR ILKHNSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVALETFVGKHPKELLSSLQSTSNEDITLCEILDPRLPFPG MTAALHDIVQVAIAAFACLSPNPSSRPTMRCVSQYFLSRLTPLSIPLREITLQQLMAQELRHLELPTLEIEISN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 4.0E-112 | – | |
| PIRSF | 1 | 201 | 201 | 1.2E-20 | – | |
| PANTHER | 1 | 212 | 212 | 4.0E-112 | – | |
| ProSiteProfiles | 1 | 197 | 197 | 26.902 | ||
| Pfam | 1 | 192 | 192 | 8.5E-27 | ||
| SUPERFAMILY | 2 | 195 | 194 | 1.05E-47 | ||
| Gene3D | 8 | 202 | 195 | 9.9E-50 | – | |
| ProSitePatterns | 53 | 65 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0501100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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