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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0503000 |
| Transcript ID | LotjaGi1g1v0503000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aquaporin-1; TAIR: AT5G37820.2 NOD26-like intrinsic protein 4;2; Swiss-Prot: sp|Q19KC1|NIP21_MAIZE Aquaporin NIP2-1; TrEMBL-Plants: tr|A0A1J7GXT1|A0A1J7GXT1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0503000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102069155..102073181) extracted from Lotus japonicus Gifu genome v1.2.
TATAAAAGGGCCACTTGATACCACTCGTGGTTAAACATTGGAGACCACATTTCTCAAATATATATTAAGCTCCTTAAAAA GGTATAAACAACCATGGAGGGGATAGATATTGGAAAATCATGCTGCTTTGTCACTGATACAAGTGGAATGCAAAATCCTA GAACTCTAAATCAATCATTTTGTCTTTCTTTTGCAAAACTGGCAGAGAACTACCCTGCTGGATTTCCCAGAAAGGTAATA ACTTCAAGAGAACTCTAATCTTTACAATTCATATATGTCTTGTTTTCATTGGAAAATATTACATACAGAAATCACTCGCA GAAGTTAATTTCTTCTCAAATTGATTCTGACTTTAGAATTAATTATAGAAGAATTTTGAAACGGGCATTTGATTAATTTT GATTCTTGTGCTAAATAACAGGTATTTGCAGAGGTAATAGGCACCTTCCTGTTGGTATTTGTGGCAAGTGGTTCTGCTGC TATGAATGCCATTGATGAAAACAAAGTCTCAAAACTTGCAGCTTCACTTGCAGGAGGATTAATCGTGACGGTGATGATTT ATTCAATTGGACACATCTCTGGGGCACATATGAATCCAGCTGTTTCCTTAGCTTTTGCCACCGTCCGGCATTTTCCTTGG AAACAGGTTTGTCTTACATGTCTTCCAAGTCCCACCACATAATGTTCGTTTTGGAGTACTCATGCTCAAGGAAGATTAAT GGCATAAACAATAAGAATACTAACAAACTTTCTTTACTAAGGTTAATGTTTCATGAGATCCTTACATGATGAGTTTCATA TTGTTCGCCATGTGGACCGAAGATGTTGAATCAGAACCTTTATGATTTAGTAGTCTAGAGTTTGATCTTTACCCTTCGCA TATTTTAATTAAAAAGTGGAATATAAGCACATGGTTGTGCATTTATCAACGCTTCAAACCTAAAAGAGTCTTTTGTGAGG GAGTGTGTTAGAATCTAAATATAAAATCATTGATAGGGCCAACAACTTAAACTTTCAAGACAACTAGTGACTTAGCACAA CAAACATCTAATTTTTCTTTCTATGTTTTTTTTTTTATCATATATTACAATTTTCTACCTTCTCAATATTTATCATTCAT AATGTCAATTGAATGTATGCATTATATGTTTATGAATCATTTTTGTTTACTTTTACAATCTCCAAGATCCCAATCTTGAT ATCAAATTACTACTATGATCATTCGAACTGAGACCTCCCCTATATCCATACTTCTTACAGGGTTTAGTTTCACTACAAAC AGAATTCTTCACAAAATTATCTAAACTCTGTAAATTTTTGAGTAGCCTATTAGTAATTTCATCATAGCATTTGCTGACCC TATAATATTTTTTTTGTGGAAATAAACGTCTAAACTGTAGGATCCACATATTACTTCATATGAATCTGAGTCTGACCCAC ATTTGTACTGGGTCAAGTCCAGGTCAAGATGGTTTCAGCCAAGGAAAAAAACAGGTACAGGCCAATTTCACGTCTGACAG TAGACCTAAAGTGGTCCATGGTCATGGACAAGAAATAATGGGACAATTTATATGGTCTATACATTCTCTACAAATTATAT ATCTGCATGTGAAAAGAATTTGAACCACATAGCCTCCCAGGTACAAAATGATGCATAGCATATTTATGTACATTCTCCTA CCCTTAAAAAGTGAGAGGATTTTAAATTTTTTTATATGATATGAAATATAAAATATATTTCTTAAAATTAATAGTACTAT ATATTGAAATAACAAAAAAAATTATAAACTACCAACAAAATCTAGCACAGCTGGTAGATACTTGACCCCTTAAACATTTA GTCCAAGTTTTAATTCGATCTATGAGCAGTTCGATTTTTGAGTCTCGAAAAAATTAGTCTCATTGATGATTGTTGTGGAA ATATCTTAGGAAAAAACCGAGAAAAAAAGACAGATTTTAAATTTGTGCTAGTTAACCAATTAATTTTATGGACTAAGTTT TGTAATTAGCTCACAATTTCCTTGCAGGTCCCATTTTACATTGCAGCTCAACTCATAGGAGCTATTTCCGCATCCTATAC ACTACAAGTGTTGTTAGCACCAGCAAAGCAACTTGGGACAACTTCACCTTCTGGATCAAATGTTCAAGCACTAATCATGG AAATAGTGTCTACCTTCACCATGGTGTTCATTGCCACGGCTTCCTCTATTGACACAAAAGCAGTAAAATTCTGACAACAA TGATAAAATTTCCCAATTTATTTCCCCTTAAGCAATAATTTTTAACCATTTCTAAAAAAAAAATGATGTTATTTGGCAGA TTGGAGAGCTAGCAGGAGTAGCAGTAGGTTCTTCTGTTAGCATAGCAAGCATTGTCGCCGGGTAAGAAATTATATGGAGT AAAAATGCTTTATCAAGAAAAATGTCACTAACAAATTAAAAGGGTTTCTTTGCAAATTGAATTTAACGTATCATATTGTA AATAATATATATGAAACACGATTCTTTATTTAGGTAATGTATTTTATGAGTAATGTATTTTTATATGAGAATGATGGAAA TAATTTATGACCATTAAATTTAATAATGAATGATCATTAAAAGATAATAAATGGTTATATGGGCACTTAAACATGTCAAA AAAATCACATTACTTAAAGTTTTATTTTTAACCTTTCATTATTATATCTCATGATTTATTCTCAATATTCTCACATAAGA AGATCATTCTCATAAGATACATCATGTAATAATTAAAAATATGGTTCGTAAGTCGATCATTCTTTTGACATAGTCCGTAG AATTGCTTAAAAAGTGTATTCCTCCTCCCTTAGTTAGCAAAAAAAAATATTACATCAGCATAGAAAAAAAAACTTATTGA ATAAGACTTAGTTGAAAGTTAAGTTAAAAAACCATGAAATTAGCCTATGATTTGAAAATTATTAACATAATCAATCTTGC TAAGGCAAAAGTTTTCCTTTTTTGGTCAATCCTAATGAAAAAAATTATCTTGTCCATTTATGCAGACCCATTTCAGGTGG ATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAGGTGCATCCTACAAGGGAATTTGGGTCTATATTCTTGGAC CTGTTACTGGGGCACTTTTAGGGGCATGGTCTTACAGTTTGATACAGGATCAAGGAAAGCCCGTTCTTGATATTTCTCAA TCTTCTTCCCTCTCATTTTTGTTGCGCCAAAAGATTAGTGAAATTGAGCAAATTAGTAACAACAACCATGATTGCTCGGC GTGAATACAATATTTTAAACACCCTCCATGTAATGATCTCAAGTTCAATATCATATATCAACTTTCAAGAATCAAGATTA ACCTTGTGTACGTATTTGAACATTGTTTTTGTCCTTAAATGAGAAGCTAGTTACGAAAGAAATGACATGAATATAAATTC ATTTAATCACATTCACTCCCAAAGTGGGATAAGAGACTATTAATCAAGACATGTACTTAAACATTTTTTTTCAAAGAAGC TTAGAACGATTAAGGAGGTAAAGATGTCACTCGTGGTGAACAAAATGTTGGGGTTTGGGGCTTCTTTCCTATGTGGAGAA AGACTCAAATATATAAGTCCACTTTGTCTCACTTAACAAGTGGAGAGAGGTCAGTTTTGAGCAAAAAGAAAGTTAGCTCA TTTTGTGAAGAGAGAAGCTCAAAAGTGAGAGGGAAATAAGAGAAACAATTTTCGCACATACTCAGAGCAGTCTCGGTAGA TCTGTCGTAGCGCATTCGTTCACTGTCGGATTTGTCCAAAATTTGGACAGGAGGTTCGTGACTCCTGGGTCTTCAATTTG GACTGTTGGATCGGTGAGAAGTCGTCTGTGGAGGGAGAAATATGGCTCGGACAGTAGCAGTGTTTTGCTCGTTTTTCTGT TCTACTTTGTTCTCAATTTCATGCTTGTTGCCTTGTTGTTTTGGCTGATTATTGAGCACGATTTGTGCTACATTTTGAGA CTCTCTTGTATCCTTATTTGATCATAG
CDS sequence (LotjaGi1g1v0503000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGGATAGATATTGGAAAATCATGCTGCTTTGTCACTGATACAAGTGGAATGCAAAATCCTAGAACTCTAAATCA ATCATTTTGTCTTTCTTTTGCAAAACTGGCAGAGAACTACCCTGCTGGATTTCCCAGAAAGGTATTTGCAGAGGTAATAG GCACCTTCCTGTTGGTATTTGTGGCAAGTGGTTCTGCTGCTATGAATGCCATTGATGAAAACAAAGTCTCAAAACTTGCA GCTTCACTTGCAGGAGGATTAATCGTGACGGTGATGATTTATTCAATTGGACACATCTCTGGGGCACATATGAATCCAGC TGTTTCCTTAGCTTTTGCCACCGTCCGGCATTTTCCTTGGAAACAGGTCCCATTTTACATTGCAGCTCAACTCATAGGAG CTATTTCCGCATCCTATACACTACAAGTGTTGTTAGCACCAGCAAAGCAACTTGGGACAACTTCACCTTCTGGATCAAAT GTTCAAGCACTAATCATGGAAATAGTGTCTACCTTCACCATGGTGTTCATTGCCACGGCTTCCTCTATTGACACAAAAGC AATTGGAGAGCTAGCAGGAGTAGCAGTAGGTTCTTCTGTTAGCATAGCAAGCATTGTCGCCGGACCCATTTCAGGTGGAT CAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAGGTGCATCCTACAAGGGAATTTGGGTCTATATTCTTGGACCT GTTACTGGGGCACTTTTAGGGGCATGGTCTTACAGTTTGATACAGGATCAAGGAAAGCCCGTTCTTGATATTTCTCAATC TTCTTCCCTCTCATTTTTGTTGCGCCAAAAGATTAGTGAAATTGAGCAAATTAGTAACAACAACCATGATTGCTCGGCGT GA
Protein sequence (LotjaGi1g1v0503000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGIDIGKSCCFVTDTSGMQNPRTLNQSFCLSFAKLAENYPAGFPRKVFAEVIGTFLLVFVASGSAAMNAIDENKVSKLA ASLAGGLIVTVMIYSIGHISGAHMNPAVSLAFATVRHFPWKQVPFYIAAQLIGAISASYTLQVLLAPAKQLGTTSPSGSN VQALIMEIVSTFTMVFIATASSIDTKAIGELAGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIAGASYKGIWVYILGP VTGALLGAWSYSLIQDQGKPVLDISQSSSLSFLLRQKISEIEQISNNNHDCSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | - | – | |
| Gene3D | 30 | 264 | 235 | 8.4E-64 | ||
| PANTHER | 36 | 257 | 222 | 9.7E-96 | ||
| PANTHER | 36 | 257 | 222 | 9.7E-96 | – | |
| SUPERFAMILY | 42 | 258 | 217 | 9.55E-63 | ||
| Pfam | 44 | 251 | 208 | 8.4E-53 | ||
| PRINTS | 46 | 65 | 20 | 5.7E-44 | ||
| CDD | 46 | 254 | 209 | 1.27045E-54 | ||
| Phobius | 48 | 67 | 20 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 102 | 24 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| PRINTS | 85 | 109 | 25 | 5.7E-44 | ||
| Phobius | 103 | 122 | 20 | - | – | |
| ProSitePatterns | 103 | 111 | 9 | - | ||
| PRINTS | 122 | 141 | 20 | 5.7E-44 | ||
| Phobius | 123 | 141 | 19 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Phobius | 142 | 160 | 19 | - | – | |
| Phobius | 161 | 179 | 19 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| PRINTS | 166 | 184 | 19 | 5.7E-44 | ||
| Phobius | 180 | 190 | 11 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 191 | 213 | 23 | - | – | |
| PRINTS | 197 | 219 | 23 | 5.7E-44 | ||
| Phobius | 214 | 232 | 19 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 233 | 254 | 22 | - | – | |
| PRINTS | 234 | 254 | 21 | 5.7E-44 | ||
| Phobius | 255 | 293 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0503000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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