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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0504200 |
| Transcript ID | LotjaGi1g1v0504200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B9VJS9|B9VJS9_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0504200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102184698..102194379) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAATTAAAATTTGCATTCACTTTGTGGTTGTATTTTGTATGAAGGGAAATTTTGGCACAAAGGTTGAAATTGTCAAA TTGTTGGCATGTGACCCAGAGACTTGAGGAAACATCCTATCATATACTGACATTAGTTAAACAAGTCATACAAAATTGAA AACAAAATGCCTTCAAATTAATTATAAGGTTTTAGAGACTTAAGGGTGGGTGCATAAAAGGTATATGAAGTTCTAAATTC ATAATAGTAGCTTTGATGATTGAATGTTACAATTATATTTCTGTTTCAGCATACTGCATTTGGTCTCTTCTTTGATGCTT TCTTAATCGAGAAAGTTAACATGCATGCAGTTTTCCTTCTTTGCTGCCCATTGCAGATTGCTGAAAGAAAGAAACTTATT TCTTATGAACTCAGTGGCAAATCTCGCCCAAATAATTCAAGTCCACAAAACGCTTCTACCAGTGAAGACAATCAGGAGGG TGTGAGAGAATCAAGTTCAAAGGAGATCACTGGAGAATCTAGCACTGTTGATGGTGAAGGTGAACTTATTCCCACCTTTG GCTGCAGCAGAATGTGCTCCCTGGTCAAAAACAGGTAATTAACCTATTCTATTTGGAAAATTTTCCTTTCTAGTATCATG TTACTGAATTATCCTATGACATGCTCAGATATATGCATTCTTTATGTTATTCATCTGACACTGAAACTAAATTATTCATC AATTCTAATATGTTATTGCAGTTAATGTAATAACGTATTGGGACAACATAGTTATTTGTCCTTGTCCTTCTCCATTACAT TATTAATTTCATACAAACATGAATGAACAAGGTAAACTATCAAACAAAAGAAACACCACCAACAGCATAAACAACAGAAA CATACACATATTAAGAAGACATGCAGCCAATCCCACGTCTGAAAGTAGGAAACACAAGAAACAAACCGCTGCAAACAATT CCCACCATCAAAGGGAAACTCTCCATGACTTGAGCCATGTCCCTCTCATGCCCTGGGAACAAGCAATTCGTGACTCTATG ATCGGAGAAAGCAATGGCCACGAACACCATCACTGACATGACAGCATGAACAAAGTCCTGGAACCCAACCTTATACTTGT CGTCCTGCGGCACCGCCACAAGGAGCCCCGGTTTGAAGACGGACAGCCCTTTCGGCGTGACGAAACCATAGTACACGTTG CCATCAGGGCCGTGGAAACTGTCGGTGAAGTGGAAGAAGAAGCAGGAGAGGGCGCAGAGGGAAAGGAGGAGGTGGATCAT CACGGTGTTGACGTGAGTGCACTCGCCATTCTTGTAGATGGAGGGAAGGACCATTTCGAACGTTAGGAGTGTCCCTGTGG GGAGGAAGTTTCCCAGCAATGAGGTCTTGGAGAGGGTCTTCTGGACGCCCTTCGCCATCATGGCACGCCGCGGCTTCCGG CCAGGATCCGCCGTGTCGCCCGGCGGTGGAAGGTCGGAGGCCACCTGGGGTGGTGGAGTTGCATTGTAGACTTTGATGCC TACTTGTTGTTCAGTTGGGTCCATTGTTGGGTTTGAAAGAGATGTGGTGGGGAGAGGACAATGATGATGAATGAAGATAA ATTTGGAATGTTGCATTTGAGGGTTTTATATATAGTTGCATGCAGTAACAACAGTTTCATCAGTTTAAATTTCTCGGGCG GTTATTGACGGTTAATTGACCTTTGTTACTGAATAGAGTGCTTTTATGAACTTGTTGAAGCGAGAGTATTATGTGGTAAA AAAACCATAACAATTTCAGCCGTACATATAACTATTTAAATTTAAGGCAATTTAAATGTGAGTTCATGCTTATTATTTTC ACATAACATGAAACATGCCTTTAATACTAATAAAAACAAGAACAAGTGTCAATAAGATACAAACAGAGATTCCATCAATG GTGATAGTGACACATGCTGGTCCTGACTTGCTTGTAAAACTTCACGTTTTAAATTTATGCAATTTTTTTTCTTATATCTT TGAACAGTTTTGTGGCCAAGCTAATTTCTCACCCAAATTAAGAGACTACGCGTTTCCAAATCTTCTGTTCCAAATTCTCT GTAATTTTGAACCTCAAAACTCCTTCATGGCTGCTCTTTCTGTGGGTCCCTTTCCCACTACCCACCTAATGATTTTTCTT GCTTGTTATTTGTCTATATATTGGTTAGTTCTTCTGCCCCTAAGTCCTCATCATTTGGGTTTATTCATCACTTAGTTTAA GCATTTGGTTGTTGTGCCATATTATTTTCTGGCTTCTGATGGCGTCATCTATTGGATCTTCACCATTTGTCTTGGAAACT ACAACTAGTAGTGCTCAAGTTTTTGTGGTGCCTGAGAGTAGAAGAAACCGTTGTCTAAGATTGGGGTGGGATTGGCACAA AAGGGGTTTGTTAAGTAAGAATATAAGAGCAGAAGCTAATGGGAGTAATGGGACAAATGGGGATGAAGATGGGTCAGAGG GCGTGCTTCAGGCCACTACTGAAAAGAGCAAGAAGGTTCTTGCTTGGCAAAGCAATTTACTTCAACAGGTACAGATTTCT TCTATCTCAAAACTAATAAGATATAGACTTTTGATTCACTCACACTCTACTTTCTCTATAATCGCATTTCCACTTTCTTT TTCATTCTATTTCTCTCATTTTTTCGTATCACATCACTCATCATATTTTTCATTTCTCCGTCTTCTTTTTCTGTATCTCA TTAGATGTAGCCATGTATGTGAATACGGGGTGTGAAAATAATATTTGTAAGCTATAGTACAATGAAAAACTTAATTAATC ACTCAATTCTTAATTCTTAATTTTTTGGTACAATTTTTAGTATTTTTACTAATGTTATCATTTTTCTGACTTTCCTAGTT GTCTTTTTATAATTGGATAACAATCCAAACAATATGTATATAAGTTTTATATTTTTTTTTATAATGGGTTAAATAAAGTT TTGGTTTCTATATAATACGCTAAGTTTGAAAATGGTCTCTCATTAGAGTAAAGTTTGAACTCGGTCCCTACTGTTTGAGA AAATACCTGGATTTAGTCCTTGCGGGAGGTGGAAGTCCGGTGACCTTTGCTACATGGCTTCACCGATCTTTCGGGACTTA TGTTAGTTACTGAGTTAGTGGCAAAGGTCAACAGACCACAACCTCCACATGGTCTAAAACCAGGTAATTTCTCAAACAGT AGAGACTGAGTTCAAACTTTACTTCGGAACAATTTTCAAACTTAGTGTATTATACAAGTTAGTGTATTATACAAGGACCA AAATCTTATTTAACCTTTTATAATTGTCTTTTTCAACGCACTGTGTACAAGTTTTGCCTTTTAGTGGCACATATATGCTT TTAATTTCCCTTACATATTTAGACACCCAATTCAACAATACAAACATCTAGCATAAACCTCATCAACTCATCTTTCTCTT TATTTCTCACTTTTTATCACACCACATCATATATTACATTCATTATTTCATTTTATTCCCTTCTTTTCTCACTTTACATG TCTACACCTATTAAGTGTGTACCCAATATTTTCCTTTTAATTTTCCAACTTCAATTTGAAGATTTTTAAGTGCATTTTTT TTTTAACTTTAGGTGCATTTTTGGTTGGTAGCAGACTTTTTGTTTTGTTTTGGTCATGTTTGTGTATTTTTCAGTTAAGT GAAAGTGAGTTTTTAATCAGAAAATTTTGAGTTTAGAAAAAAAATATGTTCATATATACTTTCTAGGTTACAAAAAGAAA AGGTTAGAAAAAAGTGAGTCACTTGTTATTTTACAAGATTGTCGATATAGTACATCATCTTTATATTATATTTGTATTTA TAAAGTAATTTCACTTTATTCTATCCGAACAAACTCTATTTTTGAAGTTATTTTTATACTCCATTCTCAATCACAAAATC ATTTTTTCAAACTTAATTATACAAAACTTACTTTTATGATACCTACTTTCTGTCATCTAATAAAGCGATTGAAATATGTG CGTTGTGAGACTTAGTGCATGTCAAATTTATTTACTAAATAAACTAACTTTATATTTTTCTCAAAATTATTATTTAGTTA AAAATATTTTCTTTCATGCTATTTAAAACGTGTTTGTAATGTATAACATGATATTACTCTGATAAATATAAACAATATTT GTATTATTCTATTATTATGATATATACTATATTTTATTAAAATAGATTAAAATCTATACATAGGACTAATAGGCCAAATT TAACTGAGTTTAGTTATAAATTATAATGCAGTGACAATGTCAAAATGGTTTACACCGTTATATAATTAGAATCCATCAAC TTTCCATATCATTTGAATTTAAAATATTTAAAATGAAAAATGTAGAGATGTGATCATATGCATGTGTAAAACTCTTTACA GTACATTTGAAATTTTTTCATACAGATTAAATCCAAATTAGAAATAACTGCTTTCAAATTAATTATAAGGTCTAGTTAGA GACTATTTGATAATTGAAAGTTACACTTATGTTTCTGTTTCAGCTTATTACTTCATTTGGTCTCTTCTTTGATGCTTTCT TGATCCAGAAAGTTAACACATGCACTTATTTGCTTCTTGTTGCCCATGTCAGATTGCTGAGAGAAAGAAACCTATTTCTT ATGAACTCAGTGACAAATTTCCCCCAAATAATTCAAGCCCACATAATGCTTCTACCAGTGGACACAATGCAGTTGAAAAC CAAAATGGTGGCATTGTTTGGAGGAAGTATGTCAATTCTTCCACATATAGTGACACCATCATTGAATCAGAAGGGAACAG TATTTCTCATGAAGGAAGCAATGAATCAAATCAACAGAATGGTTCCATCAGCAGAGTTAATGCTGTTGAAACCCAAAAAA GTGGCACTTTTGTAAGAAATTATGTCCATTCTAATAAAGGGTCTCTGGAAGTAACATCTGTAGGCATTAATGGAGGATTT GATGAAGTTAAGGAGGAAAATGTTAAAATTCCCACCCCCAAAATGTCTTCCTCTGAACTATATTTTACTGAACAATTTAA AGGCAAGAAATATCAGGCAATTAAGCCTGATAGTGATACTCTGCAAGCTTTCCTTGCAAATGGCACTGAAACTTCTAGTA TAAAGGTTGAAAATCAGGAGGGTATGAGCGAGACAAGATCAAAGCTGATAACCGAAGAATCTAGTACTGTTGATGGAGAA GGTGAAATATCCGCACCTTTGGCTGGGACCAATGTCATGAATGTTATATTGGTTGCAGCAGAATGTGCTCCCTGGTCAAA AACAGGTAATGTTATATTCCTTGTTAGGTTCATGTTAGAGTACGTGTTTGGTTATCAGGTGAATGCAACCTGAACAGACT TTAATCTCAATCCATAAGAATAATTTTATTCACTTTTTACATTGAAGTTTGTGCTAATGTCTGTTGGGGCTAACGAGGTA TCCAAACATAGCTTGAGTTGTCCTATGACAAGCTCAGATATGTATTTTTCAGAAGAGACACTCAAATTATATTGTTTCAA CATAAAGTGAGCTCATAAGTACAGTTGGATCTTGGCAATTGACTAACTTTGCTTGCAACCAGTTAAATAGCCTCATGGTT CACTCTTTGAGATAAATTTGCATTAGCCAGATTCTTAATTAAGAAAAACATAATAAATGTACATACCAATTTTATAAGTT GTAAGTTCTATGCCTCAGAAAAAAATAAAGTCTCATATGTAATCTGGTGTAGCCTTAACCTTTTTCCAGGTTGTTTGAAA ACTTGAATAAATGGACAAGAGAAAAAAAAAATAATAAAGCACTGCAAGATTTTCTTTTGATTTACACATTTGTCATTCCA AACCTTGCTCACAAACAAGCTAACACCGTCATATGATAAATACAGCCATTTATAAGCATTCATAGGCTTCAACTACTTCC ATGCTAAACATGTGGTGTATCTTTTGTTATCCTTCTGTGCATGCTATTGTTGTTTTAATGTAAATTATAGACTTATACCT GTGTTAATAGGTGGGCTTGGAGATGTTGCTGGTTCATTACCAAAGGCTTTGGCTAGGCGTGGACATAGAGTCATGGTAAA ATGTTGTTTCCTAAATGAACTGACTCACAATCTGTGTGAAGACATCTCACTTTTAAAATTCACTACTTGCTCAATGAAAA ACCGCATGAACTTCAAAATCCTTTCCCAGGTTCCTTTTGAATTATGTATTGATTTTTTTTTTCTCATCTCCTGTTTCCCT CATAGGTTGTGGCACCTCGGTATGGTAATTATGCTGAACCACAAGATACGGGAGTTCGAAAAACATACAGAGTAGATGGT CATGTACGCAGCAACTACTTAATTATCAATCAATTATAATATTTGAATCTATTAAATTTCTTCTACTTTGGTGGTGTTAT AACCTTCACAATTTTCAATTTACAGGATATGGAAGTACAATATTTTCAGGCCTACATTGATGGTGTAGACTTTGTTTTTA TTGAAAGTCCAATTTTTCATCATCTGGATAATAACATATATGGAGGAAGCCGATTGGTAATAATCTATTTTTCTTAAGTT CAGGACCACTTTATTGTTTTTCATAAAACCCATCCACAACTTCTCAAGGCCCTAAAATGAATTGGAAAAAGGAAAAGAAA AGAAAAAACCTTATTTTGTTAGGTATTGGTTTGCTCTGTTAGCTAAATGATTATGCAAGGTATAGTCAAAATACAATGCT GTTATGTTTTAAAAGGTATCTGAGAAGTTCATCTTGGTATCAAAGACTTCTCTGTTACCTATAACTAGTTTTCTGTTTGC ATTATTTCTTCGCCATTTGACTCATGTTGTCTTGCCTCTAATGGAACAGGATATTCTAAAGCGCATGGTGCTGTTCTGCA AGGCAGCTGTTGAGGTACATAAACTCAATGGCTTTGTGACTTAATCAATCATGTGATCCTCTAGCTATAATCTGTGCCAA GTCTTTTAGCAGATTACGTATGCTTTTCATTTTATGCTGAAAACAAGTGCATCTGAATACTAGATTTGTGGAATGTAAAT AGTGCACCCTTCTTAAGAATCCTATCATGAGAAGACTCCTATACAATATTTGGAAGCTACTTTGGTCCTAACTATCCGAG CCATGAAAATTCTCCCAGTGTCTATTTTACTGATCACCCGAACCATGAAGCATTTGTACAACTCGTATTCACTAATAGAA GCTCAAATGTTCTCACATAAGGGATTATTCTCAAATAAAAGATTGGTGACATGGTTTATAGTTATACAAATCATTTTTAT CTACAGTGTCAAAATTCATTCTGGAACACATTTTATATTTCAAATTCTTGGTTCTGTATGCTCACAACACGGCTAAACGA ATTTAACAATTTGCAGGTTCCTTGGCATGTTCCCTGTGGCGGTGTTTGCTATGGAGATGGAAATTTGGTCTTCATAGCAA ATGATTGGCATACTGCATTGCTGCCAGTGTATCTGAAGGCATACTATCGTGACCAGGGTTTGATGAAGTATACAAGATCA GTTCTTGTGATCCATAACATAGCTCACCAGGTTCAATCTCTATCTAGATAACAATTTATCTATAGTTAATTTATTGTTTC ACAGTTTTTTTTTTTTTTGATAAGGTATTGTTTCACACAGTTAATAAAGAAACTGGTGGATTTTTTTCTTAGCCAACAAA TATGATTCCCTTGTTTAGATCATAAAAAGGATTCAAATCTTCCATCCCCAAATTGTGTCTCATTCTCTCTGTCCCACCAA TAAAATTTTGACATGTTAATAAAAAATCACCTTGTACGTTTGTAACTGCCCCATTTATGAATTTGTTCATTGACATGGTG AGATAGGATAATAAATTGGTCATTTTTTGGGGACAGAAGTTCTTGATCCAGCTCAACCTATTTTTCTGTAATGCTCAGAT TTCATTTTGAAAAGCAAACGAAACTAAGAGATCAAGAACATGTTTGCACAACAGATGGATCTTAGTAATTAAATTACTTG TGGGTTGTATCTGAAAGCAAATCTTTTACCTTGAATGAGATAATACTTTAAGTGGAGTCAGATCATTGAATCTGATTTCC ATTTTCTTCATAGTTGGAGTCTAAATTGCATTTTTTTTCCTACATATTGAGAAAGAACACTGACACATACTTTCCTTACA GGGTCGGGGGCCAGTTGATGATTTCTTCTTTGTGGATTTACCTGAATACTATATGGACATTTTCAAATTATATGACCCTG TTGGAGGTGAACACTTCAACATCTTTGCAGCTGGTTTGAAGGCGGCAGATCGCGTTGTCACGGTTAGTCATGGATATGCC TGGGAGCTTAAAACTTCAGAAGGTGGTTGGGGTTTGAATGGGATCATAAATGACAATGGATGGAAACTGAGGGGGATTGT GAATGGAATTGATAACAAAGAATGGAATCCAATGCATGATGTTCACTTGAAATCAGATGGCTACACTAACTACTCACTTG AGACATTGCCTGTTGGCAAGGCTCAATGTAAAGCAGCATTGCAAAAGGAGCTTGGTTTGCCTGTAAATGAGGATGTCCCA GTGATTGGTTTCATTGGAAGGTTGGATAATCAGAAAGGTGTTGATATCATAGGTGAAGCAATTCCTTGGATGATGGGTCA GGATGTGCAACTAGTCATGTTGGGAACTGGAAGGCCTGATCTTGAACACATGCTCAGGCAATTTGAAAACCAACACAATG ACAAGATCAGAGGATGGGTTGGATTTTCTGTGAAGATGGCTCACAGGATCACTGCAGGTCAGGGACGAACCGAGTTTTAT ATGAAAATGGGGCGGTCGCCTTCCAAGATAATTTTTTTTCTTAACATAATAGTATTTGGATGTTATATTCGCCACCTCCT AAAATATTTTATATAACCTAACTCAATTAGTCATTATTGATTTTGCCTAATGTGTTAAATTTTCGCTCCCCTTACCCATT TTTCTGGTTGTGTCCCTGCTGCAGGTGTAGACATATTGCTCATGCCATCAAGATTTGAGCCATGTGGGTTGAACCAACTC TATGCCATGAGTTATGGAACAGTTCCTGTTGTACATGCTGTTGGTGGATTGAGAGATACTGTGCAGCCTTTTGATCCTTT CAATGAGTCAGGACTTGGGTGGACTTTTGATAGTGCAGATTCTGGTAAGTTAATACATGCATTAGGGAATTGTTTATTGA CCTATAGGGAGCATAAGAAGAGCTGGGAAGGGATTCAAAGGAGAGGAATGATGCAAGATCTTAGCTGGGACAATGCTGCT CAGCTATATGAGGAGGTGCTTGTTGCTGCCAAATACCAATGGTGAATTTTTTGTATCTGTTCCATGATTCCATCTGTGCA AACTGTACAATAAAGAACACCTTCATGTTGAATAGTTAGAGCATCCTAATTGTTGTATTAGGAGAGGAACTGCTAAGGAT ATAAAAGTTATTCATAGTTTCCAGTGAGAGCCTTCAGTGGGAAGTGGGAAGGCAGAAATGTTGTGCTATAAAAGTTATGT AACAGTAATTCAGTTTACTCTTTATACCCTGTAACAGCTCAATTGATGCATAGTTGAATTGACTTTCCAGATAAGGTTTT AACATACTTTCACATTAGTCCCCACTTGTATTGCCCCTATTTAATCTCTAAATCAATATTTTGCTGGCAACTATTGTAAG CT
CDS sequence (LotjaGi1g1v0504200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGGTGAACTTATTCCCACCTTTGGCTGCAGCAGAATGTGCTCCCTGGTCAAAAACAGGTGGGCTTGGAGATGT TGCTGGTTCATTACCAAAGGCTTTGGCTAGGCGTGGACATAGAGTCATGGTTGTGGCACCTCGGTATGGTAATTATGCTG AACCACAAGATACGGGAGTTCGAAAAACATACAGAGTAGATGGTCATGATATGGAAGTACAATATTTTCAGGCCTACATT GATGGTGTAGACTTTGTTTTTATTGAAAGTCCAATTTTTCATCATCTGGATAATAACATATATGGAGGAAGCCGATTGGA TATTCTAAAGCGCATGGTGCTGTTCTGCAAGGCAGCTGTTGAGGTTCCTTGGCATGTTCCCTGTGGCGGTGTTTGCTATG GAGATGGAAATTTGGTCTTCATAGCAAATGATTGGCATACTGCATTGCTGCCAGTGTATCTGAAGGCATACTATCGTGAC CAGGGTTTGATGAAGTATACAAGATCAGTTCTTGTGATCCATAACATAGCTCACCAGGGTCGGGGGCCAGTTGATGATTT CTTCTTTGTGGATTTACCTGAATACTATATGGACATTTTCAAATTATATGACCCTGTTGGAGGTGAACACTTCAACATCT TTGCAGCTGGTTTGAAGGCGGCAGATCGCGTTGTCACGGTTAGTCATGGATATGCCTGGGAGCTTAAAACTTCAGAAGGT GGTTGGGGTTTGAATGGGATCATAAATGACAATGGATGGAAACTGAGGGGGATTGTGAATGGAATTGATAACAAAGAATG GAATCCAATGCATGATGTTCACTTGAAATCAGATGGCTACACTAACTACTCACTTGAGACATTGCCTGTTGGCAAGGCTC AATGTAAAGCAGCATTGCAAAAGGAGCTTGGTTTGCCTGTAAATGAGGATGTCCCAGTGATTGGTTTCATTGGAAGGTTG GATAATCAGAAAGGTGTTGATATCATAGGTGAAGCAATTCCTTGGATGATGGGTCAGGATGTGCAACTAGTCATGTTGGG AACTGGAAGGCCTGATCTTGAACACATGCTCAGGCAATTTGAAAACCAACACAATGACAAGATCAGAGGATGGGTTGGAT TTTCTGTGAAGATGGCTCACAGGATCACTGCAGGTGTAGACATATTGCTCATGCCATCAAGATTTGAGCCATGTGGGTTG AACCAACTCTATGCCATGAGTTATGGAACAGTTCCTGTTGTACATGCTGTTGGTGGATTGAGAGATACTGTGCAGCCTTT TGATCCTTTCAATGAGTCAGGACTTGGGTGGACTTTTGATAGTGCAGATTCTGGTAAGTTAATACATGCATTAGGGAATT GTTTATTGACCTATAGGGAGCATAAGAAGAGCTGGGAAGGGATTCAAAGGAGAGGAATGATGCAAGATCTTAGCTGGGAC AATGCTGCTCAGCTATATGAGGAGGTGCTTGTTGCTGCCAAATACCAATGGTGA
Protein sequence (LotjaGi1g1v0504200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKVNLFPPLAAAECAPWSKTGGLGDVAGSLPKALARRGHRVMVVAPRYGNYAEPQDTGVRKTYRVDGHDMEVQYFQAYI DGVDFVFIESPIFHHLDNNIYGGSRLDILKRMVLFCKAAVEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRD QGLMKYTRSVLVIHNIAHQGRGPVDDFFFVDLPEYYMDIFKLYDPVGGEHFNIFAAGLKAADRVVTVSHGYAWELKTSEG GWGLNGIINDNGWKLRGIVNGIDNKEWNPMHDVHLKSDGYTNYSLETLPVGKAQCKAALQKELGLPVNEDVPVIGFIGRL DNQKGVDIIGEAIPWMMGQDVQLVMLGTGRPDLEHMLRQFENQHNDKIRGWVGFSVKMAHRITAGVDILLMPSRFEPCGL NQLYAMSYGTVPVVHAVGGLRDTVQPFDPFNESGLGWTFDSADSGKLIHALGNCLLTYREHKKSWEGIQRRGMMQDLSWD NAAQLYEEVLVAAKYQW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 6 | 493 | 488 | 35.726 | ||
| SUPERFAMILY | 10 | 489 | 480 | 9.74E-110 | – | |
| PANTHER | 10 | 497 | 488 | 0.0 | – | |
| PANTHER | 10 | 497 | 488 | 0.0 | – | |
| CDD | 11 | 489 | 479 | 0.0 | – | |
| TIGRFAM | 11 | 490 | 480 | 2.4E-165 | ||
| Pfam | 11 | 249 | 239 | 1.5E-63 | ||
| Gene3D | 26 | 489 | 464 | 4.7E-165 | – | |
| Gene3D | 264 | 476 | 213 | 4.7E-165 | – | |
| Pfam | 306 | 451 | 146 | 1.9E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycogen (starch) synthase activity | Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1). |
Expression pattern of LotjaGi1g1v0504200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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