Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR013534

Source: InterPro

Description

IPR013534 is a Starch synthase, catalytic domain.

<p>This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose ([ec:2.4.1.21]), rather than UDP-glucose ([ec:2.4.1.11]) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2975950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase IIb precursor [Lotus japonicus] gi\|221063676\|gb\|ACL98482.1\|	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 PF00534 PF08323 PTHR12526 PTHR12526:SF337 SSF53756 TIGR02095 cd03791	11
Lj1g3v2975950.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase IIb precursor [Lotus japonicus] gi\|221063676\|gb\|ACL98482.1\|	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR12526 PTHR12526:SF337 SSF53756 TIGR02095 cd03791 mobidb-lite	13
Lj2g3v0909570.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: soluble starch synthase 1, chloroplastic/amyloplastic-like isoform X1 [Cicer arietinum] gi\|502136358\|ref\|XP_004502657.1\|	Domains IPR013534 NON_CYTOPLASMIC_DOMAIN PF08323 PTHR12526 PTHR12526:SF17 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756	10
Lj2g3v1058180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase IIa precursor [Lotus japonicus] gi\|221063674\|gb\|ACL98481.1\|	Domains G3DSA:3.40.50.2000 IPR011835 IPR013534 MF_00484 NON_CYTOPLASMIC_DOMAIN PF08323 PF13692 PTHR12526 PTHR12526:SF337 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 TIGR02095 cd03791 mobidb-lite	17
Lj2g3v1058190.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase IIa precursor [Lotus japonicus] gi\|221063674\|gb\|ACL98481.1\|	Domains G3DSA:3.40.50.2000 IPR011835 IPR013534 PF08323 PF13692 PTHR12526 PTHR12526:SF337 SSF53756 TIGR02095 cd03791	10
Lj2g3v1468340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase V precursor [Lotus japonicus] gi\|187611215\|gb\|ACD13787.1\|	Domains Coil G3DSA:3.40.50.2000 IPR013534 NON_CYTOPLASMIC_DOMAIN PF08323 PTHR12526 PTHR12526:SF382 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 SignalP-TM_GRAM_POSITIVE mobidb-lite	14
Lj3g3v2515230.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Granule bound starch synthase Ib precursor [Lotus japonicus] gi\|170676395\|gb\|ACB30385.1\|	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 PF00534 PF08323 PTHR12526 PTHR12526:SF383 SSF53756 TIGR02095 cd03791	11
Lj3g3v2515230.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Granule bound starch synthase Ib precursor [Lotus japonicus] gi\|170676395\|gb\|ACB30385.1\|	Domains IPR013534 PF08323 PTHR12526 PTHR12526:SF383 SSF53756	5
Lj4g3v0151570.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: soluble starch synthase 3, chloroplastic/amyloplastic-like [Glycine max] gi\|356546408\|ref\|XP_003541618.1\|	Domains G3DSA:3.40.50.2000 IPR001296 IPR013534 PF00534 PF08323 PTHR12526 PTHR12526:SF341 SSF53756 cd03791	9
Lj4g3v0281070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic-like [Cicer arietinum] gi\|502141922\|ref\|XP_004504704.1\|	Domains Coil G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 NON_CYTOPLASMIC_DOMAIN PF00534 PF08323 PTHR12526 PTHR12526:SF304 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 SignalP-TM_GRAM_POSITIVE TIGR02095 cd03791 mobidb-lite	20
Lj5g3v1262950.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Granule bound starch synthase Ia precursor [Lotus japonicus] gi\|170676393\|gb\|ACB30384.1\|	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 PF00534 PF08323 PTHR12526 PTHR12526:SF383 SSF53756 TIGR02095 cd03791	11
Lj6g3v1874670.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase III [Phaseolus vulgaris] gi\|133253467\|dbj\|BAF49176.1\|	Domains Coil G3DSA:3.40.50.2000 IPR005085 IPR011835 IPR013534 MF_00484 PF08323 PF16760 PTHR12526 PTHR12526:SF341 SM01066 SSF53756 cd03791 mobidb-lite	14
LotjaGi1g1v0287000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT5G24300.1 Glycogen/starch synthases, ADP-glucose type; Swiss-Prot: sp\|P93568\|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|X5CTV8\|X5CTV8_LENCU Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0287000	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 NON_CYTOPLASMIC_DOMAIN PF00534 PF08323 PTHR45825 PTHR45825:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 TIGR02095 cd03791	17
LotjaGi1g1v0504200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp\|Q43093\|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B9VJS9\|B9VJS9_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0504200	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF12 SSF53756 TIGR02095 cd03791 mobidb-lite	13
LotjaGi1g1v0504200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp\|Q43847\|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B9VJS9\|B9VJS9_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0504200	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF12 SSF53756 TIGR02095 cd03791	12
LotjaGi2g1v0259700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp\|Q43093\|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B9VJS8\|B9VJS8_LOTJA Starch synthase IIa; Found in the gene: LotjaGi2g1v0259700	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 NON_CYTOPLASMIC_DOMAIN PF00534 PF08323 PTHR45825 PTHR45825:SF12 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 TIGR02095 cd03791 mobidb-lite	18
LotjaGi2g1v0332000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycogen synthase; TAIR: AT5G65685.12 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp\|Q0WVX5\|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B2ZGM6\|B2ZGM6_LOTJA Starch synthase V; Found in the gene: LotjaGi2g1v0332000	Domains Coil G3DSA:3.40.50.2000 IPR013534 NON_CYTOPLASMIC_DOMAIN PF08323 PTHR46083 PTHR46083:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 SignalP-TM cd03791 mobidb-lite	15
LotjaGi3g1v0403200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp\|O82627\|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B2CP02\|B2CP02_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi3g1v0403200	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF10 SSF53756 TIGR02095 cd03791	12
LotjaGi4g1v0014500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase family protein; TAIR: AT1G11720.2 starch synthase 3; Swiss-Prot: sp\|Q43846\|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A4F2M4\|A4F2M4_PHAVU Starch synthase III; Found in the gene: LotjaGi4g1v0014500	Domains Coil G3DSA:2.60.40.10 G3DSA:3.40.50.2000 IPR001296 IPR005085 IPR011835 IPR013534 IPR013783 MF_00484 PF00534 PF08323 PF16760 PTHR46083 PTHR46083:SF5 SM01066 SSF53756 cd03791 mobidb-lite	18
LotjaGi4g1v0025200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase; TAIR: AT4G18240.1 starch synthase 4; Swiss-Prot: sp\|Q0WVX5\|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A0A0B2R1U3\|A0A0B2R1U3_GLYSO Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi4g1v0025200	Domains Coil G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 NON_CYTOPLASMIC_DOMAIN PF00534 PF08323 PTHR46083 PTHR46083:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53756 SignalP-TM TIGR02095 cd03791 mobidb-lite	20
LotjaGi5g1v0201300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp\|Q43092\|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B2CP01\|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF10 SSF53756 TIGR02095 cd03791	12
LotjaGi5g1v0201300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp\|Q43092\|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B2CP01\|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF10 SSF53756 TIGR02095 cd03791	12
LotjaGi5g1v0201300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp\|Q43092\|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|B2CP01\|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300	Domains G3DSA:3.40.50.2000 IPR001296 IPR011835 IPR013534 MF_00484 PF00534 PF08323 PTHR45825 PTHR45825:SF10 SSF53756 TIGR02095 cd03791	12
LotjaGi6g1v0294600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase family protein; TAIR: AT1G11720.2 starch synthase 3; Swiss-Prot: sp\|Q43846\|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A4F2M4\|A4F2M4_PHAVU Starch synthase III; Found in the gene: LotjaGi6g1v0294600	Domains Coil G3DSA:2.60.40.10 G3DSA:3.40.50.2000 IPR001296 IPR005085 IPR011835 IPR013534 IPR013783 MF_00484 PF00534 PF08323 PF16760 PTHR46083 PTHR46083:SF5 SM01066 SSF53756 cd03791 mobidb-lite	18
LotjaGi6g1v0294600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Starch synthase; TAIR: AT1G11720.2 starch synthase 3; Swiss-Prot: sp\|Q43846\|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr\|A0A072V4Z9\|A0A072V4Z9_MEDTR Soluble starch synthase III-1; Found in the gene: LotjaGi6g1v0294600	Domains G3DSA:3.40.50.2000 IPR013534 PF08323 PTHR46083 PTHR46083:SF5 SSF53756 cd03791	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03791	CDD	1	4.00