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IPR011835 is a Bacterial/plant glycogen synthase.
<p>This entry represents glycogen (GS) and starch synthases (SS) from bacteria and plants. GS and SS are involved in the elongation of the linear chains of glycogen and starch, respectively, by catalysing the transfer of the glucosyl moiety of the activated glucosyl donor (UDP-glucose or ADP-glucose, depending on the organism in question) to the nonreducing ends of a preexisting alpha(1 to 4) glucan primer [[cite:PUB00074531]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycogen (starch) synthase activity | Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1). |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Starch synthase IIb precursor [Lotus japonicus] gi|221063676|gb|ACL98482.1| | 11 | ||
| – | Starch synthase IIb precursor [Lotus japonicus] gi|221063676|gb|ACL98482.1| | 13 | ||
| – | Starch synthase IIa precursor [Lotus japonicus] gi|221063674|gb|ACL98481.1| | 17 | ||
| – | Starch synthase IIa precursor [Lotus japonicus] gi|221063674|gb|ACL98481.1| | 10 | ||
| – | Granule bound starch synthase Ib precursor [Lotus japonicus] gi|170676395|gb|ACB30385.1| | 11 | ||
| – | PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic-like [Cicer arietinum] gi|502141922|ref|XP_004504704.1| | 20 | ||
| – | Granule bound starch synthase Ia precursor [Lotus japonicus] gi|170676393|gb|ACB30384.1| | 11 | ||
| – | Starch synthase III [Phaseolus vulgaris] gi|133253467|dbj|BAF49176.1| | 14 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT5G24300.1 Glycogen/starch synthases, ADP-glucose type; Swiss-Prot: sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|X5CTV8|X5CTV8_LENCU Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0287000 | 17 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B9VJS9|B9VJS9_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0504200 | 13 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B9VJS9|B9VJS9_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi1g1v0504200 | 12 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT3G01180.1 starch synthase 2; Swiss-Prot: sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B9VJS8|B9VJS8_LOTJA Starch synthase IIa; Found in the gene: LotjaGi2g1v0259700 | 18 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B2CP02|B2CP02_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi3g1v0403200 | 12 | ||
| – | Starch synthase family protein; TAIR: AT1G11720.2 starch synthase 3; Swiss-Prot: sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A4F2M4|A4F2M4_PHAVU Starch synthase III; Found in the gene: LotjaGi4g1v0014500 | 18 | ||
| – | Starch synthase; TAIR: AT4G18240.1 starch synthase 4; Swiss-Prot: sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A0B2R1U3|A0A0B2R1U3_GLYSO Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi4g1v0025200 | 20 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B2CP01|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300 | 12 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B2CP01|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300 | 12 | ||
| – | Starch synthase, chloroplastic/amyloplastic; TAIR: AT1G32900.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic; TrEMBL-Plants: tr|B2CP01|B2CP01_LOTJA Starch synthase, chloroplastic/amyloplastic; Found in the gene: LotjaGi5g1v0201300 | 12 | ||
| – | Starch synthase family protein; TAIR: AT1G11720.2 starch synthase 3; Swiss-Prot: sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A4F2M4|A4F2M4_PHAVU Starch synthase III; Found in the gene: LotjaGi6g1v0294600 | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 5.26 |