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LotjaGi1g1v0528700.2

Overview

Field Value
Gene ID LotjaGi1g1v0528700
Transcript ID LotjaGi1g1v0528700.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G13290.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LYU7|CRN_ARATH Inactive leucine-rich repeat receptor-like protein kinase CORYNE; TrEMBL-Plants: tr|A0A0S3RR85|A0A0S3RR85_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:105544394..105548533) extracted from Lotus japonicus Gifu genome v1.2.

TGGAGCCCACGTAGTACAGTGTACTGAGTGCTGCTGGCTACTCACAAAGGCGGGAACCCAGTTTTGTCGCAGAGGTATGG CCCTTTCTTGTCATCTGTATCAGATAGATAGAGAGAGAAAGAGAGAGAATCACTGAGTCATTCACTACACATGCTGTGTT GTGTTTCTTTGTGTGACCCTGTTATCTGTTTGTGAACAACATTGGGTTGGTTGTGTTTGCGTTTCGGTTGAGATAATCTC GAAAGCACTTTTAACTCAACGGAGCCTAAGAATTATTTTCACGTTCGCACATTAGAATTTGTATTTTTCATTGAAACTAC TTTGGAATGCGTGTGACCTGAAAACCAAACACACACATTGCAGTTTTTGAGGAAGGGTTTGTTTTGTGTTTCTTGTAGTT TGTAGTTGTTGCTGTTGTTGTTGGGGTTGGTGTTTCTTCAGCATGTTCATACCCCCCTTCATTTTCTGTTCAACTTTTTG ACTTTCTGTTTTGTTTCCCAGAAAAAAGATAGGAACTTTGTTTCTGGGTTTGGTTCCTTTTTCCTGGTTTTGCTAGTTTT GATAGTAGCACCAGGGAATAGTTTGTCATTTGTTTTTCTTTTGCAGGTTAAAATTCTTGTTCTGATTCTTGTAAAGGTGG GAAGTTTATGGGTGTGGGGAGAGACAGAAAGATGGGGTTAATGATTCCATGACAACAAGTTGCTTTTTATGAAGGCTTCT TTGTGAAGATTTTGGTTTGAAAATGAAAAGGGTGTGGAAGATGCTTATGCTTATGCTTGCACTCTTTTTCAACCCATTTT AGCATCAAGTGTGAAAAGTTTGGTCTTGGGGGCTTGTATGAGTTTGTTTCCAAGTGTTGTGTTGTTGTGATGATTCATCT TGCAAAAGGGGTTTTCAGCATCTTGTGAAATTCATTCCTTCTCATGCTGGAGCCTCTGAGATTGTTTTTTGGTTGTGAAT TTGCTTGTTGTGCTTTGATGTTTAGGAAAAGACACAACCCTTTTTCTCTTGCAAGGGAGTTCTTGGTATTTCAACCTCTT CTTCTTGTTCTGGTATTGTTCACCTTGCAACATAACACTGTGCATTGCCATGGAAGATTTAGCAAACACATCTCTTCAGA ACCATCGCCACCACCATCAGAATACAAGGATAACTCTAGGAAGATCATTTTCAGCATAGTTTTAGGAGCAGTCACTGGAC TAGTTTGTTCTGTTCTCTTTGCATTTGTGGTTCGTTATGTGGTTCAGTATCTGAACAGAACACCAATCCTCAAAGGCCCT GTCATATTCTCCCCAAAAATTGCCCCCAAAACACTCCAATCAGCTTTGGCAAAAGAAAACCACTTGCTAGGTTCAAGTCC AAATGGGAAATACTACAAAACTGTGCTTGACAATGGGCTGACAATTGCAGTCAAAAAGCTAACACAGGAACAAAATTCTC CAGAGGCAAAGAAAAAATCAGTGAAGAGGCAGATACAAGCAGAGCTAGAGATTCTTGCAAGGTTAAGACATAGGAACTTG ATGAGTCTGAGGGCTTATGTTCGTGAACCTGATGGATTTTCATTGATGTATGATTATGTGTCCACTGGGAGTCTTTGTGA TGTGATGAGTAGAGTGAGGGAGAATGAGTTGGTGCTTGGTTGGGAAGTTAGGCTGAGGGTTGCTGTTGGTGTGGTGAAGG GTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCAACTAATGTGATGTTGGATGCA GAGTTTGAACCCAGATTGGGAGATTATGGATTGGCTAAGCTTCTACCAAACTTGGATAGAGGGACATCTGTCTACAGCCC TCCTGAATGTTTCCATAATTGCAGGTAAGACAAAATGGATTTGATGAATCAAACTCGTTTATACTTTTATAGTATGTTAG GATCAACTTCTTTTTCCTCCGAATCAATTTTGTTAGTCAGAAGCTACTCAGATAAGTTTCTTTCTAGAATCGATTATGCC TTTAGAATTGATTTTGGAATGATTGCCAAACTTGCACTCATTGGTGCTATGAATTTGCTCTCTTTCTTTTTCTTACACCA AAAGTGTAAATCAGTGGTTGATAATGGGCATTTGTTCGGTTTGTTACCTCATTCAAAAGTTCAATACTTCATTGGAGGGC TTTTCTCTTTGGAATACCTAATCAAAGATTGTTGTTGTGAAATGTAATCAGTATTTTGAATTTTCATGGTGCCATTTACA ATTTACAATTGGTATATTATTTAATGAGAGCTTTGCAAAACCAACAATTTTTTATTTGGAAATATCACTTCATGTAGTCA AGGTTTTTAACTTTAGGCTCTTGGTAGGTCCTCACATGCTGTAAAGTGTAAACTACTAATAGCCTGTTTAGATCAGCTTC TATTTCCTCATAATCAATTATGGCATCAGTAATTACTCATAGAAGCTTCTCCACAAAATTGATTGTCTTAAATTATAGTG CTTGTTTGGAAATCATTCTACAATTGATTCTAGAGTCTGAATCAATTCTAAGGATAAACTTTTGTGTGTTCTACTATTCG AGAAGCTAAGGGAAGTAGCTTCTCTCCTTCATGAATTTGGCTTCAGCTTGGTTTCTTAATGAATTTCCAAATGTACTGTT TGTGAGTAACTTTTGGATTTCAAAATTCAAAATTGATTTTGAGGAAAAAATAATCCTAACATGCAAATAGGAAGGATTTC CAAACATGCACTAAGATTGGTAAGTCAGAACATAACATAAAAAATAGCACTCATTGTTTATTCTCTCACAAACGATGAGT GCTATTAGGAATGCCATTAATTTTGTTAATTTTCAAAAAAATAAAATATGTTTTTCTTATTTTACTCTTTTGAACTTTAT TCATTACTATCTCTCATCGTTTATTCTCTCACATCATTTATGTTTTCCTTTATCTCATCATTTATTGCAAGAGGGTATTA TTGGGAAAAATTGTTTAATGTTATCTTGAAATTGTAAGTGGACAGTTAAATAGGAACAATTTTTTCTCAAAGTGGACAAT TAAATAGGAACGGAAGGAGTAATTAAGTAATTAACAAAGGTTTGTTCATAATTTAAGTTGTTGTATCTCTTGTTGTTTCA TTGGTGGATGTCCATTTAAGCATGAATACAAAGGTTGCAATAAGATGTTTGTTCATTCCATTCTTTCATGTTAACTTCTT GTTATTCTGATTGAATTGTGTATTTTTGCAAATTTCAGCAGGTACACGGACAAGAGTGACATATTCAGTTTTGGCATGAT CCTTGGTGTTTTGTTAACTGGCAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCAAGTGGGGGGAGCTTGGGGTGTT GGCTGAGGCACTTGCAACAAGCAGGTGAAGCAAAAGAAGCTTTAGATAAGAGCATTTTGGGGGAAGAAGGGGAAGAAGAT GAGATGCTCATGGCTTTCAGGATTGCTGCTGCATGCCTCTCTGATGTGCCTGCAGATAGGCCTTGTAGTGATGAGCTTGT TCACATGCTAACACAACTGCACAGTTTTTGAAGCCAAAATACCTTGATGATTCTTCTGTTTCTGGAGTTTCTTGTTTTTG TTTTTGTTTTACCACTCCTTATCTATAAGTGCTCGTTTGGTTTGGTGTTAAACTCAACGTTAATCCGTGTTTGAGTCAAC CAGGAAAAATTTGGCTTCTCCGATGATGCATTAAGATGTGTGTTTTTCCATTTGCGTTGATGCAAACACCAATACAAACG GATATAAGATGTTAAGGGGGCTTTTTTGGTTGGCCATGGTTCTGGTGTAGTTGATTATTTTGTTGCATCATCTTGGTTTT CAATTTTCATTGTGTGGTTGCTGCTATTTTCTTTCACTCTCTATTTTTGGCTGATTTTGCAGATTATATATGTGATTGTT ATTTAGGTTACACTAGAGTAGTAGGTTTGTAAATGACTAGTGATGTTAACAGGTAATTAAGTGTTTTCTTAATACTATTG CATTAGTTGAAATATATTCCTGAATATTTCTTGTACTGTGAATACATTTGGATACATGAACATCTTTTGGTTTTGTCCCC ATATCTCCATGCCTGAACTGAGCACCATTTCATTGGCTAGTTAAGCTCAACAAAGATAAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0528700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGGAGCCTCTGAGATTGTTTTTTGGTTGTGAATTTGCTTGTTGTGCTTTGATGTTTAGGAAAAGACACAACCCTTT TTCTCTTGCAAGGGAGTTCTTGGTATTTCAACCTCTTCTTCTTGTTCTGGTATTGTTCACCTTGCAACATAACACTGTGC ATTGCCATGGAAGATTTAGCAAACACATCTCTTCAGAACCATCGCCACCACCATCAGAATACAAGGATAACTCTAGGAAG ATCATTTTCAGCATAGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTCTTTGCATTTGTGGTTCGTTATGTGGT TCAGTATCTGAACAGAACACCAATCCTCAAAGGCCCTGTCATATTCTCCCCAAAAATTGCCCCCAAAACACTCCAATCAG CTTTGGCAAAAGAAAACCACTTGCTAGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTGCTTGACAATGGGCTGACA ATTGCAGTCAAAAAGCTAACACAGGAACAAAATTCTCCAGAGGCAAAGAAAAAATCAGTGAAGAGGCAGATACAAGCAGA GCTAGAGATTCTTGCAAGGTTAAGACATAGGAACTTGATGAGTCTGAGGGCTTATGTTCGTGAACCTGATGGATTTTCAT TGATGTATGATTATGTGTCCACTGGGAGTCTTTGTGATGTGATGAGTAGAGTGAGGGAGAATGAGTTGGTGCTTGGTTGG GAAGTTAGGCTGAGGGTTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCA CTACAACTTGAAGCCAACTAATGTGATGTTGGATGCAGAGTTTGAACCCAGATTGGGAGATTATGGATTGGCTAAGCTTC TACCAAACTTGGATAGAGGGACATCTGTCTACAGCCCTCCTGAATGTTTCCATAATTGCAGCAGGTACACGGACAAGAGT GACATATTCAGTTTTGGCATGATCCTTGGTGTTTTGTTAACTGGCAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGC AAGTGGGGGGAGCTTGGGGTGTTGGCTGAGGCACTTGCAACAAGCAGGTGAAGCAAAAGAAGCTTTAGATAAGAGCATTT TGGGGGAAGAAGGGGAAGAAGATGAGATGCTCATGGCTTTCAGGATTGCTGCTGCATGCCTCTCTGATGTGCCTGCAGAT AGGCCTTGTAGTGATGAGCTTGTTCACATGCTAACACAACTGCACAGTTTTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0528700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLEPLRLFFGCEFACCALMFRKRHNPFSLAREFLVFQPLLLVLVLFTLQHNTVHCHGRFSKHISSEPSPPPSEYKDNSRK IIFSIVLGAVTGLVCSVLFAFVVRYVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLT IAVKKLTQEQNSPEAKKKSVKRQIQAELEILARLRHRNLMSLRAYVREPDGFSLMYDYVSTGSLCDVMSRVRENELVLGW EVRLRVAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLGDYGLAKLLPNLDRGTSVYSPPECFHNCSRYTDKS DIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAKEALDKSILGEEGEEDEMLMAFRIAAACLSDVPAD RPCSDELVHMLTQLHSF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 28 28 - –
TMHMM
TMhelix
27 49 23 - –
Phobius
TRANSMEMBRANE
29 48 20 - –
PANTHER
PTHR27007:SF130
36 417 382 1.3E-140 –
PANTHER
PTHR27007
36 417 382 1.3E-140 –
Phobius
NON_CYTOPLASMIC_DOMAIN
49 80 32 - –
TMHMM
TMhelix
81 103 23 - –
Phobius
TRANSMEMBRANE
81 107 27 - –
Phobius
CYTOPLASMIC_DOMAIN
108 417 310 - –
Gene3D
G3DSA:3.30.200.20
126 218 93 2.7E-14 –
ProSiteProfiles
PS50011
136 417 282 31.057
IPR000719
Pfam
PF00069
138 340 203 5.8E-33
IPR000719
SUPERFAMILY
SSF56112
139 411 273 1.3E-51
IPR011009
CDD
cd14066
142 414 273 2.01047E-91 –
Gene3D
G3DSA:1.10.510.10
219 416 198 1.6E-42 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0528700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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