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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0535700 |
| Transcript ID | LotjaGi1g1v0535700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0B2PXN5|A0A0B2PXN5_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0535700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106420362..106423712) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAATAATGAGAGGAAAGAGAGAGAAAAGATTATAACTTTAGATTAAAATAATATTTTTTTGAAAAAAAGTAACAAAG TGGGGGTTACTAAGTTGGCTAAAAGTAGAAAAAAAAAATGTAGCCCACAGTTACGGTTCAATTTCTCTCCAAATTAAAGA GACTCCAAAAAGGGGTGGGCCCCCCACCTCTACAACCCCCTCCTCCCTCCCTCCTCTCTCCCACCAAATAAGGTTACTTC CCCATCTCTCTCCTATCTCTCTCTTGCATCTCTCTCTTCTATCTCTCTCCTAACAAACAAAGCATAAAAGAGAAAGTACA TCACAGCTTCCTTTCAATCCATAAAATTATAGGTAAAACAAGTCAAGGTCATCTGTGACTGCGTGTGTACCTTAAGAAGC ACTTTGTTCACTCATCTTTGCATTGACCTTAAAAAGACTTGGTTCTCAATTCTCATCGTTACATTACATCTTGTCCTTCT CCAAAGACTTTATTGACCTGACTCTGCAAGCTAGAGAGAAATGGCTGCAAATGGTGAGAGAGTGGCAATAGGAATCGATC TAGGCACCACCTACTCGTGCGTTGCAGTGTGGAGGAACGATCAGGTTGAGGTCATTGTGAATGACCAAGGGAACAGAACA ACACCCTCTTATGTTTCCTTCACCCAGAACCAAAGGATGATTGGTGATGCTGCTCTCAATAATGCTTCTACCAACCCAAT CAACTCTGTCTTTGGTAAAATATCTTTATCTACATACTTTGCTTTTATATATGTATGATAGTAGCTAGGTTCTACAAAAT ATTATTGATTCATAAATAAATAAGACCTGCTTAATAAGACCTGTTTCCTATTTTAGAAACCAAACCATGATACTAAAAAC TATTCTTAAAACATCATGGTACTAAGAATCTGTTCTCTTATTTTCCTTTTTATCAGCATGCTTAGTGCTAGATGTTTGTT CTGTTAGAAATATATTATCAAAACATTCATGTCTCTTCATCTAATAGTTTAAACTTTTGGGATAATTGATTCATAACATG ATATCAAAGTCTCCATAGCCATGTGATAGAGTGTGATCCTTATAGCTCCAGAAATCTACTAAAAACTTGAATTTCATCCC AAGGTAGGTGAGTCTATGCATTATCCACACTTCAAAACATGTTATTATTTTGTATGCAGATGCAAAGCGGTTGATTGGTA GGAAATTCAGTGACCCCATGGTTCAAAGTGATAAGAAGCTGTGGCCATTCAAAGTTATTGCTGATGATAATGACAAACCA ATCATTGTTGTTAATCACAATCACAAGGAAAAACGTTTTCCTGCTGAGGCAATCTCATCCATGGTCTTGGAAAAGATGCG TGAGATTTCTGAGGCTTACCTTGGATCAAAAGTGAAGGATGCTGTTATCACTGTGCCTGCTTACTTCAATGAGTCTCAGC GCCAAGCTACCAAAGATGCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAGCCTAGTGCTGCAGCGATT GCATATGGCGTTGACATGAAAGCTTGCATTCGTGGAAGGAGAAACGTTTTCATCTTTGATCTTGGTGGTGGTACTTTGGA TGTGTCTCTTCTCACGTTTGAGATGGAAGATATCCAAGTTAAGACCATTGCTGGAGACACTCACCTTGGGGGAGAGGACT TTGATAATAGAATGGTGGACTATTTTGTGAAGGAATTCCAAAGAAAGAACAAAATGGACATCAGAGGAGACCCAAGAGCC CTTAGGAGGTTGAGATTTGCTTGTGAGAAAGCAAAGAGGACGCTCTCATGCAACACTCTGGCCACCATTGAGTTAGATTT CTTATATCAAGGTATTGATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAAGATTACTTTCAAAAGT GTATGGAGCTTGTGGAAAAGTGTGTAATAGATTCAAAGATGGACAAGAGCAATATTCATGATGTTGTCCTGGTTGGCGGC TCTTCTAGGATTCCTAAAGTGAGACAGCTACTGATGGACTTCTTTGGTAGGAAGGATCTATGCAATAGAATCAATCCTGA TGAGGCTGTTGCGCATGGTGCTGCTGTTCATGCTTCTATATTGAGCGGTGAGTTCAGTGAGAAGGTTCAAAGCTTGTTAT TGAGGGAAGTCACCCCTCTGTCCCTCGGGCTAGAGAAGCATGGGGGTATCATGGAAACAATAATTCCAAGGAATACCATG ATTCCTACAACCATGGACCATGTATTCACTACACATTTTCATAACCAAACCAATATCTTGATTCATGTTTATGAGGGTGA GAGGCAAACAACTAGACACAACAACTTGCTAGGTAAGTTTGTACTGGAAATTCCTCCATATCCTCGAGGTGTTCCTCAAA TCAAAGTATGCTTCCAAATTGATGAAGAAGGTATCTTACATGTCTCTGTCAAGGAAAAATCCAATAGAATTAACATGAAG GTTACAATAATAAATGACAAGGGAAGGTTGTCAAGGGCTGAAATCGAGAGGATGGTCAGAGAAAATGAGAAGAACAAGGC TGAAGATGAGAGGTACAAGAAGAAGGTAGAAGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAATGCCATAA ATGACGAGGACATTAGTTCGAAGCTTTCCCTAGAAGACAAGCAAAAGATCAATGATGCAATTGATTTGGTCTTGAAATGG CTTGGTATCAATGATGCTGCAGAACAAGATGATTTTGAGCGTTATAGTAAAGATCTTTCGAAGGCCTTTGATCCAATTAT GTTGAAGATGATAAAGGATCTTTCCCCAACAGATAATGATGTGACGCCAAGTACTGTTGGAAATGATAAAATGAAACGCT GGTTACAAATATTGGCAAAGCATACTCTCCAGGCAGTGTATTCAACTCTTACTGGTGACATTATTGGGTTTGTTTGTACT GTGATTGGTGATATTCTGCCCTAGTAATTAGAGTTAAAACATGATAAAATTTAAATAGACCAAATTGTATCGTGGTTTGA ACTTGTATCTTATAGTTTGAGGAAAAACCAAAATGTAATGAGAAGTGTAGCAGCTTGTTATCAAAGCAGTAAATTTCATG TTGCAAGTGACAATTTCAACTGTTAAAAACAAAATGTTTGACTTGTTATCAATGAGTTATGCACACACTTTAAGACACGT TTGGGTAGAAGCTATAACTCCATATCATGTTTGGCTCTATGGTTGAATGCTTTCTAATCTTGCATCACTTCTTTCTTTTT TTTAAGATAAAGAATCACTTCTGGTTAGAAGCTACAAGTCTTATCTTTTGAGTATTTTGTACAAACCAGAC
CDS sequence (LotjaGi1g1v0535700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAAATGGTGAGAGAGTGGCAATAGGAATCGATCTAGGCACCACCTACTCGTGCGTTGCAGTGTGGAGGAACGA TCAGGTTGAGGTCATTGTGAATGACCAAGGGAACAGAACAACACCCTCTTATGTTTCCTTCACCCAGAACCAAAGGATGA TTGGTGATGCTGCTCTCAATAATGCTTCTACCAACCCAATCAACTCTGTCTTTGATGCAAAGCGGTTGATTGGTAGGAAA TTCAGTGACCCCATGGTTCAAAGTGATAAGAAGCTGTGGCCATTCAAAGTTATTGCTGATGATAATGACAAACCAATCAT TGTTGTTAATCACAATCACAAGGAAAAACGTTTTCCTGCTGAGGCAATCTCATCCATGGTCTTGGAAAAGATGCGTGAGA TTTCTGAGGCTTACCTTGGATCAAAAGTGAAGGATGCTGTTATCACTGTGCCTGCTTACTTCAATGAGTCTCAGCGCCAA GCTACCAAAGATGCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAGCCTAGTGCTGCAGCGATTGCATA TGGCGTTGACATGAAAGCTTGCATTCGTGGAAGGAGAAACGTTTTCATCTTTGATCTTGGTGGTGGTACTTTGGATGTGT CTCTTCTCACGTTTGAGATGGAAGATATCCAAGTTAAGACCATTGCTGGAGACACTCACCTTGGGGGAGAGGACTTTGAT AATAGAATGGTGGACTATTTTGTGAAGGAATTCCAAAGAAAGAACAAAATGGACATCAGAGGAGACCCAAGAGCCCTTAG GAGGTTGAGATTTGCTTGTGAGAAAGCAAAGAGGACGCTCTCATGCAACACTCTGGCCACCATTGAGTTAGATTTCTTAT ATCAAGGTATTGATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAAGATTACTTTCAAAAGTGTATG GAGCTTGTGGAAAAGTGTGTAATAGATTCAAAGATGGACAAGAGCAATATTCATGATGTTGTCCTGGTTGGCGGCTCTTC TAGGATTCCTAAAGTGAGACAGCTACTGATGGACTTCTTTGGTAGGAAGGATCTATGCAATAGAATCAATCCTGATGAGG CTGTTGCGCATGGTGCTGCTGTTCATGCTTCTATATTGAGCGGTGAGTTCAGTGAGAAGGTTCAAAGCTTGTTATTGAGG GAAGTCACCCCTCTGTCCCTCGGGCTAGAGAAGCATGGGGGTATCATGGAAACAATAATTCCAAGGAATACCATGATTCC TACAACCATGGACCATGTATTCACTACACATTTTCATAACCAAACCAATATCTTGATTCATGTTTATGAGGGTGAGAGGC AAACAACTAGACACAACAACTTGCTAGGTAAGTTTGTACTGGAAATTCCTCCATATCCTCGAGGTGTTCCTCAAATCAAA GTATGCTTCCAAATTGATGAAGAAGGTATCTTACATGTCTCTGTCAAGGAAAAATCCAATAGAATTAACATGAAGGTTAC AATAATAAATGACAAGGGAAGGTTGTCAAGGGCTGAAATCGAGAGGATGGTCAGAGAAAATGAGAAGAACAAGGCTGAAG ATGAGAGGTACAAGAAGAAGGTAGAAGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAATGCCATAAATGAC GAGGACATTAGTTCGAAGCTTTCCCTAGAAGACAAGCAAAAGATCAATGATGCAATTGATTTGGTCTTGAAATGGCTTGG TATCAATGATGCTGCAGAACAAGATGATTTTGAGCGTTATAGTAAAGATCTTTCGAAGGCCTTTGATCCAATTATGTTGA AGATGATAAAGGATCTTTCCCCAACAGATAATGATGTGACGCCAAGTACTGTTGGAAATGATAAAATGAAACGCTGGTTA CAAATATTGGCAAAGCATACTCTCCAGGCAGTGTATTCAACTCTTACTGGTGACATTATTGGGTTTGTTTGTACTGTGAT TGGTGATATTCTGCCCTAG
Protein sequence (LotjaGi1g1v0535700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAANGERVAIGIDLGTTYSCVAVWRNDQVEVIVNDQGNRTTPSYVSFTQNQRMIGDAALNNASTNPINSVFDAKRLIGRK FSDPMVQSDKKLWPFKVIADDNDKPIIVVNHNHKEKRFPAEAISSMVLEKMREISEAYLGSKVKDAVITVPAYFNESQRQ ATKDAGAIAGLNVMRIINEPSAAAIAYGVDMKACIRGRRNVFIFDLGGGTLDVSLLTFEMEDIQVKTIAGDTHLGGEDFD NRMVDYFVKEFQRKNKMDIRGDPRALRRLRFACEKAKRTLSCNTLATIELDFLYQGIDFYSSITRAKFEELNKDYFQKCM ELVEKCVIDSKMDKSNIHDVVLVGGSSRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLR EVTPLSLGLEKHGGIMETIIPRNTMIPTTMDHVFTTHFHNQTNILIHVYEGERQTTRHNNLLGKFVLEIPPYPRGVPQIK VCFQIDEEGILHVSVKEKSNRINMKVTIINDKGRLSRAEIERMVRENEKNKAEDERYKKKVEAKNALENYAYNMRNAIND EDISSKLSLEDKQKINDAIDLVLKWLGINDAAEQDDFERYSKDLSKAFDPIMLKMIKDLSPTDNDVTPSTVGNDKMKRWL QILAKHTLQAVYSTLTGDIIGFVCTVIGDILP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 628 | 628 | 0.0 | ||
| PANTHER | 1 | 628 | 628 | 0.0 | – | |
| SUPERFAMILY | 7 | 191 | 185 | 2.41E-67 | ||
| PRINTS | 8 | 21 | 14 | 6.3E-71 | – | |
| Pfam | 9 | 615 | 607 | 2.2E-220 | ||
| Gene3D | 10 | 383 | 374 | 9.8E-161 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 36 | 48 | 13 | 6.3E-71 | – | |
| PRINTS | 58 | 66 | 9 | 6.3E-71 | – | |
| Gene3D | 71 | 126 | 56 | 9.8E-161 | – | |
| PRINTS | 146 | 166 | 21 | 6.3E-71 | – | |
| Gene3D | 192 | 366 | 175 | 9.8E-161 | – | |
| SUPERFAMILY | 197 | 388 | 192 | 2.33E-59 | ||
| ProSitePatterns | 203 | 216 | 14 | - | ||
| PRINTS | 209 | 219 | 11 | 6.3E-71 | – | |
| Gene3D | 235 | 318 | 84 | 9.8E-161 | – | |
| PRINTS | 337 | 353 | 17 | 6.3E-71 | – | |
| ProSitePatterns | 340 | 354 | 15 | - | ||
| PRINTS | 369 | 389 | 21 | 6.3E-71 | – | |
| Gene3D | 387 | 514 | 128 | 1.5E-45 | ||
| SUPERFAMILY | 392 | 548 | 157 | 3.92E-51 | ||
| PRINTS | 396 | 415 | 20 | 6.3E-71 | – | |
| PRINTS | 476 | 492 | 17 | 6.3E-71 | – | |
| Gene3D | 515 | 617 | 103 | 2.2E-29 | ||
| Coils | 515 | 540 | 26 | - | – | |
| SUPERFAMILY | 542 | 619 | 78 | 6.8E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0535700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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