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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0546100 |
| Transcript ID | LotjaGi1g1v0546100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipid phosphate phosphatase-like protein; TAIR: AT3G02600.1 lipid phosphate phosphatase 3; Swiss-Prot: sp|Q8LFD1|LPP3_ARATH Putative lipid phosphate phosphatase 3, chloroplastic; TrEMBL-Plants: tr|A0A0R0L1F3|A0A0R0L1F3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0546100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107575178..107576584) extracted from Lotus japonicus Gifu genome v1.2.
AGGATGAGGGAAGTCCAACTTGGTTCACATACTATGACTTCTCATGGATATGCACTTGCAAGAACCCACATGCATGATTG GATCATACTATTGCTCCTTGTGGTGATTGAAATCGTCTTGTACATGATCCATCCATTCTATCGCTTTGTTGGGAAGGATA TGATGACTGATCTCAGATATCCCCTGAAGAGTAATACAGTTCCTGTTTGGTCTGTTCCAGTAAGTTTACTGCTTCATATA CAACACGTACAAATGTATTTTTTCTTGACTAATTTCATTAACAAGGTTATCTTGTTCTTTTCTATTTGTCATGGTTAGAT CTATGCAGTTTTGTTGCCTGTGGTGATCTTTCTTGTTGTCTATATCCGAAGGAGAGATATCTATGATCTTCATCATGCCA TTCTGGGTATAGTTTTTAGATACCCCTCATTTGTGCAATTGCTAAGAGACATATTCTATTTGCTAAATTGAAACTATTCA AGGATGACTAGACACTATTTGCTCCCACAGGTCTATTGTTCTCCATCTTAGTAACAGCAGTACTTACTGATGCAATCAAA GATGCAGTAGGTCGACCTCGACCTGACTTCTTCTGGCGATGTTTTCCGGATGGAAAGGATGTATGTATTCCTTGAATTTT AGATTCAGCCCATGTTCTGTCTGAAAGATTTTCTCCTCCCATGCAAGCAAACTTCTATGAATCAATTAAGTCGATTCTTA ATATCTGGCACATTTGATGATTAACGGCTTCTTGCTAGGTTTATGATGCATTGGGAAATGTTGTTTGTCATGGTGACAAG GATGTTATAAAGGAAGGACATAAGAGTTTCCCAAGTGGCCATACTGCATGTATGTAGCATTTATTATATATGCTGTTTGT ACAAATGTCTAAAAAATTACTGGCTGTCAGAATGAGCTTCGCTTAATTTAGTCAATTTAACTCTTTGAAAGCATGATCAC TCAATTTATTTGATTTGTTGTTTGTTTTAAGAAGTTTCAATCTGTGTGCAGGGTCCTTTGCTGGTCTGGGGTTTTTATCA CTGTACTTATCTGGAAAAATAAAAGTATTTGATCAAAAAGGCCATATTGCAAAACTTTGCATTGTTGTTCTACCACTACT TTTTGCATCACTTGTCGGCATTTCTCGAGTCGATGACTACTGGCACCACTGGCAGGACGTGTTTGCTGGAGGTCTTTTGG GTCAGTCCATCTTTAGCTTCTTAATTAAAATTAGCTTAAATTGGCCTAACAGTTCATCCAAAAAAAACTACTCACCACTA CTGTTGGTACCTGACTTTGTGAGATTTCTTCTTTCAGGGCTTGTAATGGCCACATTTTGCTATTTGCAGTTTTTTCCTCC TCCTTATCACCCTGAAGGTATGTTTCACTGCAGATTCTATTAGATGA
CDS sequence (LotjaGi1g1v0546100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGAAGTCCAACTTGGTTCACATACTATGACTTCTCATGGATATGCACTTGCAAGAACCCACATGCATGATTGGAT CATACTATTGCTCCTTGTGGTGATTGAAATCGTCTTGTACATGATCCATCCATTCTATCGCTTTGTTGGGAAGGATATGA TGACTGATCTCAGATATCCCCTGAAGAGTAATACAGTTCCTGTTTGGTCTGTTCCAATCTATGCAGTTTTGTTGCCTGTG GTGATCTTTCTTGTTGTCTATATCCGAAGGAGAGATATCTATGATCTTCATCATGCCATTCTGGGTCTATTGTTCTCCAT CTTAGTAACAGCAGTACTTACTGATGCAATCAAAGATGCAGTAGGTCGACCTCGACCTGACTTCTTCTGGCGATGTTTTC CGGATGGAAAGGATGTTTATGATGCATTGGGAAATGTTGTTTGTCATGGTGACAAGGATGTTATAAAGGAAGGACATAAG AGTTTCCCAAGTGGCCATACTGCATGGTCCTTTGCTGGTCTGGGGTTTTTATCACTGTACTTATCTGGAAAAATAAAAGT ATTTGATCAAAAAGGCCATATTGCAAAACTTTGCATTGTTGTTCTACCACTACTTTTTGCATCACTTGTCGGCATTTCTC GAGTCGATGACTACTGGCACCACTGGCAGGACGTGTTTGCTGGAGGGCTTGTAATGGCCACATTTTGCTATTTGCAGTTT TTTCCTCCTCCTTATCACCCTGAAGGTATGTTTCACTGCAGATTCTATTAG
Protein sequence (LotjaGi1g1v0546100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREVQLGSHTMTSHGYALARTHMHDWIILLLLVVIEIVLYMIHPFYRFVGKDMMTDLRYPLKSNTVPVWSVPIYAVLLPV VIFLVVYIRRRDIYDLHHAILGLLFSILVTAVLTDAIKDAVGRPRPDFFWRCFPDGKDVYDALGNVVCHGDKDVIKEGHK SFPSGHTAWSFAGLGFLSLYLSGKIKVFDQKGHIAKLCIVVLPLLFASLVGISRVDDYWHHWQDVFAGGLVMATFCYLQF FPPPYHPEGMFHCRFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 250 | 250 | 2.3E-157 | ||
| PANTHER | 1 | 250 | 250 | 2.3E-157 | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| SUPERFAMILY | 21 | 247 | 227 | 6.8E-38 | ||
| Gene3D | 22 | 247 | 226 | 2.1E-33 | – | |
| Phobius | 26 | 46 | 21 | - | – | |
| TMHMM | 26 | 45 | 20 | - | – | |
| Phobius | 47 | 65 | 19 | - | – | |
| CDD | 55 | 240 | 186 | 4.70695E-81 | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 66 | 87 | 22 | - | – | |
| Phobius | 88 | 98 | 11 | - | – | |
| SMART | 98 | 241 | 144 | 2.5E-19 | ||
| Phobius | 99 | 117 | 19 | - | – | |
| TMHMM | 100 | 117 | 18 | - | – | |
| Pfam | 100 | 238 | 139 | 3.7E-29 | ||
| Phobius | 118 | 165 | 48 | - | – | |
| TMHMM | 162 | 181 | 20 | - | – | |
| Phobius | 166 | 182 | 17 | - | – | |
| Phobius | 183 | 193 | 11 | - | – | |
| TMHMM | 193 | 215 | 23 | - | – | |
| Phobius | 194 | 213 | 20 | - | – | |
| Phobius | 214 | 224 | 11 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 225 | 241 | 17 | - | – | |
| Phobius | 242 | 256 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phospholipid metabolic process | The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester. | ||
| Molecular function | Phosphatidate phosphatase activity | Catalysis of the reaction: a 1,2-diacylglycerol 3-phosphate + H2O = a 1,2-diacyl-sn-glycerol + phosphate. |
Expression pattern of LotjaGi1g1v0546100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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