Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0546400 |
| Transcript ID | LotjaGi1g1v0546400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GMP synthase [glutamine]-hydrolyzing]; TAIR: AT5G38200.1 Class I glutamine amidotransferase-like superfamily protein; Swiss-Prot: sp|P49865|NTPR_ENTHA Protein NtpR; TrEMBL-Plants: tr|A0A151TDA1|A0A151TDA1_CAJCA Putative glutamine amidotransferase-like protein RP404 family; Found in the gene: LotjaGi1g1v0546400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107614736..107617166) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTAATGTGACATGAAAGTTTTCAATAATATACATTCCCTACATCATTATACTCATATGATAGATTCATCTCTAT CCAATCAATCTCTAGCTCTCATCTCCTATAAATATTAGTAGCAAAGAAAGGCTCATCATTCGGAACATATAATCCACGTT CAGTTACTACAACCATTGTTTCTTCTTCCACCTCAAAACTTGGGAAGGGGATAACAATCATCAACTCAATTAATCACACA ATATAATAATGTCTTCAGATCTCTCTGTCATTCTACCTCGTGTTGTAATTGTTTCTAGACGAACGGTTCGCAAAAACAAA TTCGTTGATTTTGTGGGTAAGTTTCATTTCATTCAAACACCTCAATCAATTCTAGTTTTCTTTCCAGAAATACAATAGTG AAAACATGAAATTCCATATATTTTCTGGAAAATAAAATATGTTACGATAAAAAACACACAGTTGTGGCACATCAACATTT CCAATGATGTATTGGATTGAGGTTTTTTTAATAATGTTTGATGATACAAATTCTGTGAAACATGGCCTTTATTTCTTATT AATGTTTTCATTACATGATTTTCAGGTGAATATCACCTTGATCTAATAGTAGAATATGGCGCTGTACCGATCATTGTTCC TCGTGTTTCTGGGGTCCATATGTTGTTGGATAGTTTTGAGCCAATCCATGGAGTGCTTCTTTGTGAAGGAGAAGACATTG ATCCTAGTTGGTACGAACAAGACACCTCAGGTCTTTCCCAAGAGGAATTGGAAGAAATAAGAAAGCTTCATGCTAGTGAT ACAGCCATTGATAGAGAGAAAGATTCAATTGAGTTGAGCCTTGCCAAGCTTTGCCTTGAAAGGAACATTCCCTTCCTAGG AATATGTAGGGGATCACAGGTCCTAAATGTGGCATGTGGGGGTACTTTATACCAAGACATAGAGAAAGAGCTTTCAAAAA ATTGCCTAGAGAGCCAAAGAGTTATGCACATGAACTATGATGATTATGATGGGCATAGGCATGAGGTGGCAGTGGTTGAA AACACCCCTTTGCATCATTGGTTCAAAGAATCATTGGTTGAAGGGAAAAATGATATTTGGGTTAATAGTTATCACCATCA AGGGGTTAAGAGATTGGCACAACGTTTTGTCCCAATGGCATTTTCCTGTGATGGTTTGATTGAAGGATTTTATGACCCAG ATGCTTATAATCCAGAAGAGGGTAAATTTATCATGGGATTGCAGTTTCACCCTGAGCGTATGAGGAAGCCTGATTCAGAT GAATTTGATTATCCAGGATGCCCTTTTGCTTATAAGGTTTGAAAAATTAAAATGGTTTCTTTCAAGTTCTACTAATTTAT TGTTAATATATTGAATCTACACCAATAAATTCTAGCACAGCACAACTGGTAGATAGTTTGTCGCCTTAAGCATCTAGTCC ATGATTCGATTCCTGAGCAATGCTATGAATAATGATTTGTTGGGAGAGGCCAAAAATCCTCACTCCGAGCTAATTTTGCA GTGGAGTTAAACGTACTCTGAATTCTAAGAATTTTATCTCTAATGTGAACATTAACAAACTAAGTAGGAATTAATACATG AATTTTTTCATTGATACTACTCTACCAGGAATTTGTGAAGGCAGTTATTGCTTATCAGAAGAAGCTGATTAACTCAACAC CTGTTGAAAAGCCTTTGAAGCTTAATAAGGAAATGGAAAACAAGAGGAAAATTATAGTTCGCAGTTTCTCACTTGCAAAA AATCTTTACAATGCTGGCCAGGGAATGAACCCCTCCAAAGAACTTGAACCTGGGGCACAATTTCTCGAGGTACAACACAA ACTATGTAGAAAAATCTAAAAAGAAAGACACTATTGTATTTTGTGTTAACTTATGCCAATTTGTTTTTTCCAATTTGTTT TTTCAACATTTTCTATGTATTCTTGATTTATGTTTGAATTTGCAGTCAAATACAGCCTTGAGTGTGCAGCAAGAAAATAG GTTAAAGCAAATGGGTGCAACAGTTAGGAATGCAGGGTCATACATACAGAGACTGAAGCTGAATGAGGAGAGAGAGAAAA TGGCAAGAAATGTAATGGGGAAAATGTCAGTGGAACAATTATCTGAGCTATTGTCTTTCTATCACACTATGGGGCAGATT TGTTCAGAAGTGCTAGAGAGAAAGATGCAGGATATTGTCAATGAGCTTGCTTCATAATTTGTTTCATATTCTTAACTTTT TGTAATTTTTTGAGGACCATGTAGTATTTGTTGCAATTTGATGGTCTACATTGTATCATACAATCATCTAGTTCTTGTTG AGGTATTGTAAGGTGGATTTGATCCATAAAACACAATAAAGGTTTTTTTTTTAACTCAACACAATAGAGGTTCATCACAC AAGTTCAATGAAATTTCAATATTATATACTA
CDS sequence (LotjaGi1g1v0546400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCAGATCTCTCTGTCATTCTACCTCGTGTTGTAATTGTTTCTAGACGAACGGTTCGCAAAAACAAATTCGTTGA TTTTGTGGGTGAATATCACCTTGATCTAATAGTAGAATATGGCGCTGTACCGATCATTGTTCCTCGTGTTTCTGGGGTCC ATATGTTGTTGGATAGTTTTGAGCCAATCCATGGAGTGCTTCTTTGTGAAGGAGAAGACATTGATCCTAGTTGGTACGAA CAAGACACCTCAGGTCTTTCCCAAGAGGAATTGGAAGAAATAAGAAAGCTTCATGCTAGTGATACAGCCATTGATAGAGA GAAAGATTCAATTGAGTTGAGCCTTGCCAAGCTTTGCCTTGAAAGGAACATTCCCTTCCTAGGAATATGTAGGGGATCAC AGGTCCTAAATGTGGCATGTGGGGGTACTTTATACCAAGACATAGAGAAAGAGCTTTCAAAAAATTGCCTAGAGAGCCAA AGAGTTATGCACATGAACTATGATGATTATGATGGGCATAGGCATGAGGTGGCAGTGGTTGAAAACACCCCTTTGCATCA TTGGTTCAAAGAATCATTGGTTGAAGGGAAAAATGATATTTGGGTTAATAGTTATCACCATCAAGGGGTTAAGAGATTGG CACAACGTTTTGTCCCAATGGCATTTTCCTGTGATGGTTTGATTGAAGGATTTTATGACCCAGATGCTTATAATCCAGAA GAGGGTAAATTTATCATGGGATTGCAGTTTCACCCTGAGCGTATGAGGAAGCCTGATTCAGATGAATTTGATTATCCAGG ATGCCCTTTTGCTTATAAGGAATTTGTGAAGGCAGTTATTGCTTATCAGAAGAAGCTGATTAACTCAACACCTGTTGAAA AGCCTTTGAAGCTTAATAAGGAAATGGAAAACAAGAGGAAAATTATAGTTCGCAGTTTCTCACTTGCAAAAAATCTTTAC AATGCTGGCCAGGGAATGAACCCCTCCAAAGAACTTGAACCTGGGGCACAATTTCTCGAGTCAAATACAGCCTTGAGTGT GCAGCAAGAAAATAGGTTAAAGCAAATGGGTGCAACAGTTAGGAATGCAGGGTCATACATACAGAGACTGAAGCTGAATG AGGAGAGAGAGAAAATGGCAAGAAATGTAATGGGGAAAATGTCAGTGGAACAATTATCTGAGCTATTGTCTTTCTATCAC ACTATGGGGCAGATTTGTTCAGAAGTGCTAGAGAGAAAGATGCAGGATATTGTCAATGAGCTTGCTTCATAA
Protein sequence (LotjaGi1g1v0546400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSDLSVILPRVVIVSRRTVRKNKFVDFVGEYHLDLIVEYGAVPIIVPRVSGVHMLLDSFEPIHGVLLCEGEDIDPSWYE QDTSGLSQEELEEIRKLHASDTAIDREKDSIELSLAKLCLERNIPFLGICRGSQVLNVACGGTLYQDIEKELSKNCLESQ RVMHMNYDDYDGHRHEVAVVENTPLHHWFKESLVEGKNDIWVNSYHHQGVKRLAQRFVPMAFSCDGLIEGFYDPDAYNPE EGKFIMGLQFHPERMRKPDSDEFDYPGCPFAYKEFVKAVIAYQKKLINSTPVEKPLKLNKEMENKRKIIVRSFSLAKNLY NAGQGMNPSKELEPGAQFLESNTALSVQQENRLKQMGATVRNAGSYIQRLKLNEEREKMARNVMGKMSVEQLSELLSFYH TMGQICSEVLERKMQDIVNELAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 419 | 418 | 7.3E-247 | – | |
| PANTHER | 2 | 419 | 418 | 7.3E-247 | – | |
| Gene3D | 8 | 287 | 280 | 4.2E-68 | ||
| CDD | 14 | 261 | 248 | 1.28054E-64 | – | |
| ProSiteProfiles | 22 | 285 | 264 | 12.806 | ||
| SUPERFAMILY | 27 | 283 | 257 | 4.78E-30 | ||
| Pfam | 28 | 253 | 226 | 6.1E-41 | ||
| Coils | 407 | 423 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0546400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…