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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|A0A0B2Q7V0|A0A0B2Q7V0_GLYSO Plastidic glucose transporter 4; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795297..107801794) extracted from Lotus japonicus Gifu genome v1.2.
AAATAGTGTTGGTTTTTAATTTATTTTTTTCTGGTGAATTCAGAAGAGACTTGATGAGCAGAACAAGCTGGTGCGGTTTG AGACCTGGTTCGGTCAACATGGAAACCGAGCTTAGTAGTAGAGGAAGGGGTTTTGGTGGTATTTTTGGCTCTGCAGCTAA GTCTAGATCACCAAGGGTTCAACCTTCTGGTTTGTCTACTGTTACTGGATGGCTTTCATGTGTTTAGCTTTATCAGATAC TCCTTGATTTATTTTGTGTGTTAAACCAAAGATATGCAAAGTGCCTCTTGATTCATCTTCATGGTTGAATTGTTGCTTGC ATGATGCGTTGTTTGGCTTCTTTTTCATGGCTAGATTTCTTACTTAATGTTGTTTTTTTGTTGCACTATTGTCTGTTACT TAGTATGTTTAGATCAGCTTCTCATTCATCAGAATCAATTATGGAACTCAGAAGCTACTCACAGAAGCTTCTCCCCATAA TCGATTCTGATTTCAGAATAAATTGTAGAAGATTTTCCAAACTAGCACTATGTGAACTTGCCTTCATGTTCAGGTTGCAG CTGTTTGCTCGGGTACTAGTGTACTTAAGCCTGTTGTTTACCAACATGAAATTTCATCAAAATAAAATGTCTCAGACATG TTTCTTTGCTCTCTTATCAATTTTGGGGGAGTGCTGCTTATCATTGGTTGACAATGCAAATGGCTAATTTCATCCTTGTT GCAATGAGTTAGAAACCATACTCAGATTCTGTAATCTGTAAACATAATGCATGTTTGAAAGACCATGTTAGCGTCTATTG TATTTTATCCTTTATAGATGCCTTTTATATTATCTGTTGATGGCTCTTCATTTCATATGTATGTTATCAATGTGTTTATT TCCGTCTAATTATGCTAAGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAAC CTTCTGGAACTGTTCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGTATGAATTT CATCTCCATTTAGGGTGCATTTGGATAAACAAATTAATTAAGTGCTTATTCATAAGCAGTTATTGCATAAGCGCTTATTC ATAAGCTAACTTGATAAGCTTACAAAAATAAGTTCAAAATAGATTATAGGTAGGTATAAGCACTGGTTCATAAGTTAACC AGAGCAGCTTATGAGAATAAACTCAAAACAACTTATAGGTAGGTTATAGGCTATTTATATAAGCTCTCACAAACACTTGC GTAAACGCTTATGCTATAAGAGAAGTTCAAATAAGCTCTTCCAAACAGGGTTTTAGTATGTAGTTCAATGGACTTATAAT GCAGTGTATCATTTTCTTTATACTGCCATCCAAGTTAAGTGAATGGTGTAAGCCACTTCTTGAAGTTGTAAGTTATAGGC TGCATGATACATACTGGAGTCTTATTTTGAGTTTTTTTTTGTTGTAATGCTGAATTTCATTGGTTATTATTCTTAGGTGG GAAACTCTGATAATGCCCTGTTTGGTGTAGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTC AAAACACTGTACTACAAGGTCTTTTAACTTTGTTGGTTGTAGTTGCAAATGAGCTTCAAGTTTGATTGATTTTATCAGCA AAGACATTGGAGATGTTTGCACAAACACTCTTTCTTATTTTTTACCTCTTATGTTTTCATTTGTAGTGTGTAACAATGAA AGCTTTCAGGATACATGTAAACATAGATTTTTTACTTGTTAATGCTACATTTATATCAACAAGAAAAAGTTTTATGGCAT GGAGTTTAGGTAGATTTATTTATCACTATTAAATGTTTGGCTTATCAAAAAAAACTATTGAATGTTTGTGGAAAATCTAC ATGTCACTGATCTTTAAACTCTATATCTCAAAATTTTGTATGCTCCTGCATTTGTTTTTTTCATGATTTTAATGAGTTAA ATCCATGAACAGGGTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGAC AAATTCGGCCGAACTAGGACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAGGATTTCTTTGGTCTGTCATTTGTCC TCAATGTATTGTTTGATCTTTTATGCAATTTTGAAATCTGACTCTTGAAATTTTAATACATTTACAGTGCTACAGCCCAG AGTGTTCAAACATTAATCATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACAT ATCTGAGGTTGTCTCTTTGTAAATTATTTAACCCTTTGTGACAATGTTTGCATATTTTAGAAGAACTACATGCTCATGGT GACTCCTTGTGATTTACAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTG GGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTATTGGGTTGTTTCATCTTGCCATTTT TTTCAGCTGTTTGTTTCTTCTGAGGATAATGATCATCTAGAGAGCTTGTATATTCATTATATAAGTTAGTCAAATTACTA TATTATTAGCTTATTCTATGTAAAATTTTAGAAGTCAAAGAAATCATTATGAGAAAGAGAGTGGAGAAATATGTATTAGT CATTGTTAATTTTCTTTAATGTGTGTAAATTTTCGCTCCCTTTATCATTTTTTTCTTCTGATTCTGTCCCTGTCTCATCA GTAGTATGTGCATTGTATTACTTGGAGGATCTGGAATAATTTGTTGATTTGTTTCTTATAAATTTGTTGTTGTCGTACTA GAGGTGGTAGAAACCATGGAATTTGTTTTTCATTGTGAACACTAAGTTGGTTCCCTGTAATTGGCTTTGTGAATTTATGT TCGTTAACATGTGCTCTCTTCTACCTTATGTAACTTTTATTAGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCT ATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATCAGGTAAGGCTGTCCTTCAATACTAT GTTTTCTTTTGTCATGGGAACAATACACTTAGATGACAAGGAAAACTACTGTTGCAAAATGATAGGTACGTGGTTTAGTT AGTTAAGTGAGGTAGTTATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAGGCTTGCTGCCTATAAATAAGAAGGG GTTAGGGAACATTAATCATCTTTTGTATTCTGTTGGAATTGGGGTTTAGGGAGAGCATTGGGTTTCTCTCTAGGTTTTGG AAGAGTGTTTGGCATTTCTGCTCTAATTCCCAAATTAGGGATTAGGGTTCTTCAATAATACATCTACAATTTCTGGTTTC TATCACAAAACTATACATTCTCTAAGTTTATTTCCTATTCATTTCACATGCCTATTTGCAAATACACTACTAGCTTTTTT AAAGAAAAGAGCACGTGTTACTTTCTAAGTCTCTATTGACATCCTTAAAAATTTTAAATGGATTAAAATTTAGAGTGATG GTAGTCGTGCACAATCTTAATCCAATGAAAAAGATATGAGCATTTATATGGTGTCGAGTTCTTTTGAAGCGTACATCATT AAGAGTTTAGCACAATACAAATAATATTTTTGAATATTTTCTGAGAAGATGACATTTGTAATTTTACAGCAAGGGAAAAT CTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAA GTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGGTATTCCAAAATCCAAA TAGTTAAGACTAATTCCAGATTTGATTAACAATGAACAAAGGTTTTCTAGTTATAAGATCTGTTGCAAAGGACTGTTATT ATTTATACCTTCATCATTTAATTTTATATGCTTGTTTCTATCGGTGCTAATATGCAGCTTTTGAAGTTCTGATCATATAT GTATATATAGGGGGCATATCAGGTGAGAGGAGTTTTTATTGTGAGAGATGAGAACATTTAATCTTGACGTACAACCATAC GTTGGGGATTGAGATTAAAAAAGTCATGTGACCTTTTGTTTTAAGCTTAGCCATTCATGGTTAGATCTAATGGTCAATAT TTACTCCTCTCATCTCTCACGATAAGAAGTTCTCTCACCTGATACATTTGCTATATATATGATAGCACAATCTTAGTGAT AATTTTCATGGATGGTGATTCATGGGACTATTGAAGTCAATAGTCTTGCTTCAACCTTAAAGCCAATGCTTAGTGATATA TGATACCTCATGCATGAGACTGTCTTTTACTTTTTGAATTTGTTCACAACTTACTTTTCTTTTTAGTCTTTTGCCTGATA GCATAGAGGTATATCTTAAATAATATCTCAGCATATTTTATGTTTAAGTTCCACTGCTCAACTTCTTTTTAGTTTGTTCC GGAATTGATTCGTGGTTAATGAATTGGTGTAGCACTTCTCTGAAATATTCCTTGCTGCAGTTGTCAGTGTAGGGGCAGCA CTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGC TTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCAAGTACTTTGCATTCTAAAAAGTGAATTATG CTCAAACATTATATTGTTTCTCACTAATGTTTGATTTTGTTGCAGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAA GGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGTAATGAATATTTTCGAATCACTTCTTTGAATCACATTCTT TGAGAATCATATTTTTGAATCACATTTGTCTTTCCCAGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAG GTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTGTCCTGTAAGTCATAAAATTTTGTCAATAAAACTAATT CCATTAACAGAGAAGCTACCTGGTGTTGTTTGTTTTTCATTTCACCTCTAACTTTGTTATATGAATTTTGAGCAGCTATG TCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAA GCAATTTCTTTATCATTAGGCACACATTGGGTAAGTGACTTAATTGGAATCTTGTATCACCTGTAATTCCTTCCCTTATC CTGCTATTAAAAAACCTGAGTGAATAGTCACTTTCGCCCTTAAAAGTTATGAGGTCGGTCGACTTAGTCTCGGAAATATG GAAATAGACAAAATAGTCACTGAAAGATAAAAGGCATTCAATTTATTCCTTGAAAGATGAAAATCACGATCAATATATTG AAAGATTAAATTGAAATTTGATTTCTCATCTTTGAGGGACTATTTTGTTTATTTGCTTAGTAGGGGATGAAACTGACCGA TCTTATATTCATGGACTAAAGTGACTATTTACTCAAAAAACTCACCATTGAGATGCTAAAATGATAGCTTAAGTGGTATT TTTAAATGGTAGGGTGGCATCCTAATTGTGAGCTTACCAAACCAAAATTTTGCTTCTTAGAGAATGAAGTAACCAAAAAC CATAGAGAAGCCATACTAAACTCAGCCATACAACTTTGCTTGTGCCTGCTGCTACTCTTGAATGATACATAAATAAAGAA ACATTTCCTAGAAAATAACTTCTGCTGCTAGCTCTATTGTGCCTACAAAGTTTCTTGGACTTGTTGAGATGATATATACT GCATTAGTTTTATGGGCACACTGATTTTATTGGTTACTTGAACATTATGCTAATGATGAAAAATGTGGAATTTTTGTTTT TATCTTATCAGATCTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTAC TTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGA AGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAAGGTTGTTCAGAAATGCACTTGGTCGTGAATTCTAATTGCTGGTGAA ATTAAGGGCCCTTTATTCAAAGCTTAACAATGTGATTAGATTGTGTAAAACAGAGATTCTTGTTTATAGATTTTTATAAT TTTATATATGAGAGAAGCTAATTTGGTTTTTGTTATGATTTTTAACTCTTACACTGGATTTGGATGAGTGGCAATAAGCG TTTGGGGAGCTTAGGTCATATCAGTTGGCATTAGTGCACACAAACGTTTGAACTTATTTCGTGACAAAATGTTAACAAAA CTTTTTTAATGCATTGGG
CDS sequence (LotjaGi1g1v0548100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAGAACAAGCTGGTGCGGTTTGAGACCTGGTTCGGTCAACATGGAAACCGAGCTTAGTAGTAGAGGAAGGGGTTT TGGTGGTATTTTTGGCTCTGCAGCTAAGTCTAGATCACCAAGGGTTCAACCTTCTGATGAAGATGTAGAGGATCTTCTCC CCACTAATACCCTAGGCAAACCTTCTGGAACTGTTCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGT TATCATCTTGGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTACAAGG GTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAA CTAGGACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAGGATTTCTTTGTGCTACAGCCCAGAGTGTTCAAACATTA ATCATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGATTTCTCC TACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTT TACCTCTGGCAGGAAATCCTACATGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGA ATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATCAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACT GTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGAT GGTTTGATTTGTTTAGTAGCCGATATAGGAAAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGA ATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGT TGGTGCATCAAATGTTTTTGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAA GCTTTAGTGGGATGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACA CTAGAGGTCATCGGCACTGTCCTCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGA GATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGAC TCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTC TTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTA A
Protein sequence (LotjaGi1g1v0548100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRTSWCGLRPGSVNMETELSSRGRGFGGIFGSAAKSRSPRVQPSDEDVEDLLPTNTLGKPSGTVLPYVGVSCLGAILFG YHLGVVNGALEYLAKDLGITQNTVLQGWIVSTLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGGFLCATAQSVQTL IIGRLLAGIGIGVTSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALVAGLPLAGNPTWWRTMFGITVVPSILLALG MAISPESPRWLYQQGKISEAEKAIKTLYGKERVASVMHDLAAASQGSSEPEARWFDLFSSRYRKVVSVGAALFLFQQFAG INAVVYYSTSVFRSAGIASDVAASALVGASNVFGTIVASSLMDRQGRKSLLITSFSGMAASMLLLSLAFTWKVLAPFSGT LEVIGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAISLSLGTHWISNFVIGLYFLSVVDKFGISTVYLGFSTVCLLAV LYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 64 | 64 | - | – | |
| PANTHER | 23 | 504 | 482 | 2.4E-290 | – | |
| PANTHER | 23 | 504 | 482 | 2.4E-290 | – | |
| SUPERFAMILY | 48 | 499 | 452 | 8.37E-67 | ||
| TIGRFAM | 49 | 498 | 450 | 1.1E-102 | ||
| Gene3D | 60 | 503 | 444 | 2.0E-123 | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 65 | 85 | 21 | - | – | |
| ProSiteProfiles | 68 | 491 | 424 | 51.574 | ||
| CDD | 71 | 489 | 419 | 2.48876E-138 | – | |
| Pfam | 72 | 501 | 430 | 1.5E-105 | ||
| PRINTS | 76 | 86 | 11 | 1.3E-23 | ||
| Phobius | 86 | 104 | 19 | - | – | |
| Phobius | 105 | 127 | 23 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – | |
| Phobius | 128 | 138 | 11 | - | – | |
| Phobius | 139 | 155 | 17 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 160 | 182 | 23 | - | – | |
| PRINTS | 161 | 180 | 20 | 1.3E-23 | ||
| Phobius | 161 | 182 | 22 | - | – | |
| ProSitePatterns | 166 | 191 | 26 | - | ||
| Phobius | 183 | 193 | 11 | - | – | |
| Phobius | 194 | 216 | 23 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 217 | 221 | 5 | - | – | |
| Phobius | 222 | 243 | 22 | - | – | |
| Phobius | 244 | 304 | 61 | - | – | |
| Phobius | 305 | 329 | 25 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| PRINTS | 316 | 326 | 11 | 1.3E-23 | ||
| Phobius | 330 | 340 | 11 | - | – | |
| TMHMM | 337 | 359 | 23 | - | – | |
| Phobius | 341 | 358 | 18 | - | – | |
| Phobius | 359 | 369 | 11 | - | – | |
| Phobius | 370 | 391 | 22 | - | – | |
| TMHMM | 371 | 393 | 23 | - | – | |
| Phobius | 392 | 402 | 11 | - | – | |
| Phobius | 403 | 425 | 23 | - | – | |
| PRINTS | 403 | 424 | 22 | 1.3E-23 | ||
| TMHMM | 403 | 425 | 23 | - | – | |
| Phobius | 426 | 436 | 11 | - | – | |
| PRINTS | 426 | 438 | 13 | 1.3E-23 | ||
| Phobius | 437 | 457 | 21 | - | – | |
| TMHMM | 437 | 459 | 23 | - | – | |
| Phobius | 458 | 462 | 5 | - | – | |
| Phobius | 463 | 484 | 22 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 485 | 506 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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