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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|K7MWN2|K7MWN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795601..107799597) extracted from Lotus japonicus Gifu genome v1.2.
CTGACTCTTGAAATTTTAATACATTTACAGTGCTACAGCCCAGAGTGTTCAAACATTAATCATCGGTCGCTTGCTAGCTG GTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGGTTGTCTCTTTGTAAATTATTTAACCCTTT GTGACAATGTTTGCATATTTTAGAAGAACTACATGCTCATGGTGACTCCTTGTGATTTACAGATTTCTCCTACTGAAATT CGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGC AGGAAATCCTACATGGTATTGGGTTGTTTCATCTTGCCATTTTTTTCAGCTGTTTGTTTCTTCTGAGGATAATGATCATC TAGAGAGCTTGTATATTCATTATATAAGTTAGTCAAATTACTATATTATTAGCTTATTCTATGTAAAATTTTAGAAGTCA AAGAAATCATTATGAGAAAGAGAGTGGAGAAATATGTATTAGTCATTGTTAATTTTCTTTAATGTGTGTAAATTTTCGCT CCCTTTATCATTTTTTTCTTCTGATTCTGTCCCTGTCTCATCAGTAGTATGTGCATTGTATTACTTGGAGGATCTGGAAT AATTTGTTGATTTGTTTCTTATAAATTTGTTGTTGTCGTACTAGAGGTGGTAGAAACCATGGAATTTGTTTTTCATTGTG AACACTAAGTTGGTTCCCTGTAATTGGCTTTGTGAATTTATGTTCGTTAACATGTGCTCTCTTCTACCTTATGTAACTTT TATTAGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAA GCCCCCGGTGGCTTTATCAGGTAAGGCTGTCCTTCAATACTATGTTTTCTTTTGTCATGGGAACAATACACTTAGATGAC AAGGAAAACTACTGTTGCAAAATGATAGGTACGTGGTTTAGTTAGTTAAGTGAGGTAGTTATCATATAATTAGATAGTTA GTTAAGAGGGTTAGTAAGGCTTGCTGCCTATAAATAAGAAGGGGTTAGGGAACATTAATCATCTTTTGTATTCTGTTGGA ATTGGGGTTTAGGGAGAGCATTGGGTTTCTCTCTAGGTTTTGGAAGAGTGTTTGGCATTTCTGCTCTAATTCCCAAATTA GGGATTAGGGTTCTTCAATAATACATCTACAATTTCTGGTTTCTATCACAAAACTATACATTCTCTAAGTTTATTTCCTA TTCATTTCACATGCCTATTTGCAAATACACTACTAGCTTTTTTAAAGAAAAGAGCACGTGTTACTTTCTAAGTCTCTATT GACATCCTTAAAAATTTTAAATGGATTAAAATTTAGAGTGATGGTAGTCGTGCACAATCTTAATCCAATGAAAAAGATAT GAGCATTTATATGGTGTCGAGTTCTTTTGAAGCGTACATCATTAAGAGTTTAGCACAATACAAATAATATTTTTGAATAT TTTCTGAGAAGATGACATTTGTAATTTTACAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGA AAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGA TTTGTTTAGTAGCCGATATAGGAAAGGTATTCCAAAATCCAAATAGTTAAGACTAATTCCAGATTTGATTAACAATGAAC AAAGGTTTTCTAGTTATAAGATCTGTTGCAAAGGACTGTTATTATTTATACCTTCATCATTTAATTTTATATGCTTGTTT CTATCGGTGCTAATATGCAGCTTTTGAAGTTCTGATCATATATGTATATATAGGGGGCATATCAGGTGAGAGGAGTTTTT ATTGTGAGAGATGAGAACATTTAATCTTGACGTACAACCATACGTTGGGGATTGAGATTAAAAAAGTCATGTGACCTTTT GTTTTAAGCTTAGCCATTCATGGTTAGATCTAATGGTCAATATTTACTCCTCTCATCTCTCACGATAAGAAGTTCTCTCA CCTGATACATTTGCTATATATATGATAGCACAATCTTAGTGATAATTTTCATGGATGGTGATTCATGGGACTATTGAAGT CAATAGTCTTGCTTCAACCTTAAAGCCAATGCTTAGTGATATATGATACCTCATGCATGAGACTGTCTTTTACTTTTTGA ATTTGTTCACAACTTACTTTTCTTTTTAGTCTTTTGCCTGATAGCATAGAGGTATATCTTAAATAATATCTCAGCATATT TTATGTTTAAGTTCCACTGCTCAACTTCTTTTTAGTTTGTTCCGGAATTGATTCGTGGTTAATGAATTGGTGTAGCACTT CTCTGAAATATTCCTTGCTGCAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCG TGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCA AATGTTTTTGGCAAGTACTTTGCATTCTAAAAAGTGAATTATGCTCAAACATTATATTGTTTCTCACTAATGTTTGATTT TGTTGCAGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGA TGGTAATGAATATTTTCGAATCACTTCTTTGAATCACATTCTTTGAGAATCATATTTTTGAATCACATTTGTCTTTCCCA GGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCG GCACTGTCCTGTAAGTCATAAAATTTTGTCAATAAAACTAATTCCATTAACAGAGAAGCTACCTGGTGTTGTTTGTTTTT CATTTCACCTCTAACTTTGTTATATGAATTTTGAGCAGCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGC CCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGGTAAGTG ACTTAATTGGAATCTTGTATCACCTGTAATTCCTTCCCTTATCCTGCTATTAAAAAACCTGAGTGAATAGTCACTTTCGC CCTTAAAAGTTATGAGGTCGGTCGACTTAGTCTCGGAAATATGGAAATAGACAAAATAGTCACTGAAAGATAAAAGGCAT TCAATTTATTCCTTGAAAGATGAAAATCACGATCAATATATTGAAAGATTAAATTGAAATTTGATTTCTCATCTTTGAGG GACTATTTTGTTTATTTGCTTAGTAGGGGATGAAACTGACCGATCTTATATTCATGGACTAAAGTGACTATTTACTCAAA AAACTCACCATTGAGATGCTAAAATGATAGCTTAAGTGGTATTTTTAAATGGTAGGGTGGCATCCTAATTGTGAGCTTAC CAAACCAAAATTTTGCTTCTTAGAGAATGAAGTAACCAAAAACCATAGAGAAGCCATACTAAACTCAGCCATACAACTTT GCTTGTGCCTGCTGCTACTCTTGAATGATACATAAATAAAGAAACATTTCCTAGAAAATAACTTCTGCTGCTAGCTCTAT TGTGCCTACAAAGTTTCTTGGACTTGTTGAGATGATATATACTGCATTAGTTTTATGGGCACACTGATTTTATTGGTTAC TTGAACATTATGCTAATGATGAAAAATGTGGAATTTTTGTTTTTATCTTATCAGATCTCCAACTTTGTCATCGGACTCTA TTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGT ACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
CDS sequence (LotjaGi1g1v0548100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGACTCCTTGTGATTTACAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATG TATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTGGAGGACAATGTTTGGAATTA CTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAAGGAAAATCTCTGAAGCTGAAAAGGCTATT AAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGA AGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGT TTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGT GCCCTGGTTGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGG GATGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCA TCGGCACTGTCCTCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCA TCTAGGATCAGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGACTCTATTTCTT GAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTG CTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
Protein sequence (LotjaGi1g1v0548100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTPCDLQISPTEIRGALGSVNQLFICIGILAALVAGLPLAGNPTWWRTMFGITVVPSILLALGMAISPERKISEAEKAI KTLYGKERVASVMHDLAAASQGSSEPEARWFDLFSSRYRKVVSVGAALFLFQQFAGINAVVYYSTSVFRSAGIASDVAAS ALVGTIVASSLMDRQGRKSLLITSFSGMAASMLLLSLAFTWKVLAPFSGTLEVIGTVLYVLSFSLGAGPVPALLLPEIFA SRIRAKAISLSLGTHWISNFVIGLYFLSVVDKFGISTVYLGFSTVCLLAVLYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| ProSiteProfiles | 1 | 301 | 301 | 21.629 | ||
| Gene3D | 7 | 313 | 307 | 8.8E-73 | – | |
| PANTHER | 8 | 314 | 307 | 2.1E-175 | – | |
| CDD | 8 | 299 | 292 | 8.81313E-79 | – | |
| PANTHER | 8 | 314 | 307 | 2.1E-175 | – | |
| SUPERFAMILY | 9 | 309 | 301 | 3.53E-32 | ||
| Pfam | 9 | 311 | 303 | 4.6E-62 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 21 | 40 | 20 | - | – | |
| Phobius | 41 | 45 | 5 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 46 | 68 | 23 | - | – | |
| Phobius | 69 | 120 | 52 | - | – | |
| Phobius | 121 | 141 | 21 | - | – | |
| TMHMM | 121 | 143 | 23 | - | – | |
| PRINTS | 132 | 142 | 11 | 9.5E-9 | ||
| Phobius | 142 | 146 | 5 | - | – | |
| Phobius | 147 | 168 | 22 | - | – | |
| TMHMM | 153 | 172 | 20 | - | – | |
| Phobius | 169 | 179 | 11 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 180 | 201 | 22 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| PRINTS | 213 | 234 | 22 | 9.5E-9 | ||
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 246 | 11 | - | – | |
| PRINTS | 236 | 248 | 13 | 9.5E-9 | ||
| Phobius | 247 | 267 | 21 | - | – | |
| TMHMM | 247 | 269 | 23 | - | – | |
| Phobius | 268 | 272 | 5 | - | – | |
| TMHMM | 273 | 295 | 23 | - | – | |
| Phobius | 273 | 294 | 22 | - | – | |
| Phobius | 295 | 316 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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