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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|G7KUB8|G7KUB8_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795601..107801139) extracted from Lotus japonicus Gifu genome v1.2.
ATCAATTTTGGGGGAGTGCTGCTTATCATTGGTTGACAATGCAAATGGCTAATTTCATCCTTGTTGCAATGAGTTAGAAA CCATACTCAGATTCTGTAATCTGTAAACATAATGCATGTTTGAAAGACCATGTTAGCGTCTATTGTATTTTATCCTTTAT AGATGCCTTTTATATTATCTGTTGATGGCTCTTCATTTCATATGTATGTTATCAATGTGTTTATTTCCGTCTAATTATGC TAAGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAACCTTCTGGAACTGTTC TGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGTATGAATTTCATCTCCATTTAGGG TGCATTTGGATAAACAAATTAATTAAGTGCTTATTCATAAGCAGTTATTGCATAAGCGCTTATTCATAAGCTAACTTGAT AAGCTTACAAAAATAAGTTCAAAATAGATTATAGGTAGGTATAAGCACTGGTTCATAAGTTAACCAGAGCAGCTTATGAG AATAAACTCAAAACAACTTATAGGTAGGTTATAGGCTATTTATATAAGCTCTCACAAACACTTGCGTAAACGCTTATGCT ATAAGAGAAGTTCAAATAAGCTCTTCCAAACAGGGTTTTAGTATGTAGTTCAATGGACTTATAATGCAGTGTATCATTTT CTTTATACTGCCATCCAAGTTAAGTGAATGGTGTAAGCCACTTCTTGAAGTTGTAAGTTATAGGCTGCATGATACATACT GGAGTCTTATTTTGAGTTTTTTTTTGTTGTAATGCTGAATTTCATTGGTTATTATTCTTAGGTGGGAAACTCTGATAATG CCCTGTTTGGTGTAGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTAC AAGGTCTTTTAACTTTGTTGGTTGTAGTTGCAAATGAGCTTCAAGTTTGATTGATTTTATCAGCAAAGACATTGGAGATG TTTGCACAAACACTCTTTCTTATTTTTTACCTCTTATGTTTTCATTTGTAGTGTGTAACAATGAAAGCTTTCAGGATACA TGTAAACATAGATTTTTTACTTGTTAATGCTACATTTATATCAACAAGAAAAAGTTTTATGGCATGGAGTTTAGGTAGAT TTATTTATCACTATTAAATGTTTGGCTTATCAAAAAAAACTATTGAATGTTTGTGGAAAATCTACATGTCACTGATCTTT AAACTCTATATCTCAAAATTTTGTATGCTCCTGCATTTGTTTTTTTCATGATTTTAATGAGTTAAATCCATGAACAGGGT GGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAACT AGGACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAGGATTTCTTTGGTCTGTCATTTGTCCTCAATGTATTGTTTG ATCTTTTATGCAATTTTGAAATCTGACTCTTGAAATTTTAATACATTTACAGTGCTACAGCCCAGAGTGTTCAAACATTA ATCATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGGTTGTCTC TTTGTAAATTATTTAACCCTTTGTGACAATGTTTGCATATTTTAGAAGAACTACATGCTCATGGTGACTCCTTGTGATTT ACAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCAC TAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTATTGGGTTGTTTCATCTTGCCATTTTTTTCAGCTGTTTGTT TCTTCTGAGGATAATGATCATCTAGAGAGCTTGTATATTCATTATATAAGTTAGTCAAATTACTATATTATTAGCTTATT CTATGTAAAATTTTAGAAGTCAAAGAAATCATTATGAGAAAGAGAGTGGAGAAATATGTATTAGTCATTGTTAATTTTCT TTAATGTGTGTAAATTTTCGCTCCCTTTATCATTTTTTTCTTCTGATTCTGTCCCTGTCTCATCAGTAGTATGTGCATTG TATTACTTGGAGGATCTGGAATAATTTGTTGATTTGTTTCTTATAAATTTGTTGTTGTCGTACTAGAGGTGGTAGAAACC ATGGAATTTGTTTTTCATTGTGAACACTAAGTTGGTTCCCTGTAATTGGCTTTGTGAATTTATGTTCGTTAACATGTGCT CTCTTCTACCTTATGTAACTTTTATTAGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTT GGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATCAGGTAAGGCTGTCCTTCAATACTATGTTTTCTTTTGTCAT GGGAACAATACACTTAGATGACAAGGAAAACTACTGTTGCAAAATGATAGGTACGTGGTTTAGTTAGTTAAGTGAGGTAG TTATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAGGCTTGCTGCCTATAAATAAGAAGGGGTTAGGGAACATTAA TCATCTTTTGTATTCTGTTGGAATTGGGGTTTAGGGAGAGCATTGGGTTTCTCTCTAGGTTTTGGAAGAGTGTTTGGCAT TTCTGCTCTAATTCCCAAATTAGGGATTAGGGTTCTTCAATAATACATCTACAATTTCTGGTTTCTATCACAAAACTATA CATTCTCTAAGTTTATTTCCTATTCATTTCACATGCCTATTTGCAAATACACTACTAGCTTTTTTAAAGAAAAGAGCACG TGTTACTTTCTAAGTCTCTATTGACATCCTTAAAAATTTTAAATGGATTAAAATTTAGAGTGATGGTAGTCGTGCACAAT CTTAATCCAATGAAAAAGATATGAGCATTTATATGGTGTCGAGTTCTTTTGAAGCGTACATCATTAAGAGTTTAGCACAA TACAAATAATATTTTTGAATATTTTCTGAGAAGATGACATTTGTAATTTTACAGCAAGGGAAAATCTCTGAAGCTGAAAA GGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTG AACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGGTATTCCAAAATCCAAATAGTTAAGACTAATT CCAGATTTGATTAACAATGAACAAAGGTTTTCTAGTTATAAGATCTGTTGCAAAGGACTGTTATTATTTATACCTTCATC ATTTAATTTTATATGCTTGTTTCTATCGGTGCTAATATGCAGCTTTTGAAGTTCTGATCATATATGTATATATAGGGGGC ATATCAGGTGAGAGGAGTTTTTATTGTGAGAGATGAGAACATTTAATCTTGACGTACAACCATACGTTGGGGATTGAGAT TAAAAAAGTCATGTGACCTTTTGTTTTAAGCTTAGCCATTCATGGTTAGATCTAATGGTCAATATTTACTCCTCTCATCT CTCACGATAAGAAGTTCTCTCACCTGATACATTTGCTATATATATGATAGCACAATCTTAGTGATAATTTTCATGGATGG TGATTCATGGGACTATTGAAGTCAATAGTCTTGCTTCAACCTTAAAGCCAATGCTTAGTGATATATGATACCTCATGCAT GAGACTGTCTTTTACTTTTTGAATTTGTTCACAACTTACTTTTCTTTTTAGTCTTTTGCCTGATAGCATAGAGGTATATC TTAAATAATATCTCAGCATATTTTATGTTTAAGTTCCACTGCTCAACTTCTTTTTAGTTTGTTCCGGAATTGATTCGTGG TTAATGAATTGGTGTAGCACTTCTCTGAAATATTCCTTGCTGCAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAG CAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGC AAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCAAGTACTTTGCATTCTAAAAAGTGAATTATGCTCAAACATTATATT GTTTCTCACTAATGTTTGATTTTGTTGCAGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTC CTTATCACAAGCTTTAGTGGGATGGTAATGAATATTTTCGAATCACTTCTTTGAATCACATTCTTTGAGAATCATATTTT TGAATCACATTTGTCTTTCCCAGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTC TCTGGCACACTAGAGGTCATCGGCACTGTCCTGTAAGTCATAAAATTTTGTCAATAAAACTAATTCCATTAACAGAGAAG CTACCTGGTGTTGTTTGTTTTTCATTTCACCTCTAACTTTGTTATATGAATTTTGAGCAGCTATGTCTTATCTTTCTCTC TTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCA TTAGGCACACATTGGGTAAGTGACTTAATTGGAATCTTGTATCACCTGTAATTCCTTCCCTTATCCTGCTATTAAAAAAC CTGAGTGAATAGTCACTTTCGCCCTTAAAAGTTATGAGGTCGGTCGACTTAGTCTCGGAAATATGGAAATAGACAAAATA GTCACTGAAAGATAAAAGGCATTCAATTTATTCCTTGAAAGATGAAAATCACGATCAATATATTGAAAGATTAAATTGAA ATTTGATTTCTCATCTTTGAGGGACTATTTTGTTTATTTGCTTAGTAGGGGATGAAACTGACCGATCTTATATTCATGGA CTAAAGTGACTATTTACTCAAAAAACTCACCATTGAGATGCTAAAATGATAGCTTAAGTGGTATTTTTAAATGGTAGGGT GGCATCCTAATTGTGAGCTTACCAAACCAAAATTTTGCTTCTTAGAGAATGAAGTAACCAAAAACCATAGAGAAGCCATA CTAAACTCAGCCATACAACTTTGCTTGTGCCTGCTGCTACTCTTGAATGATACATAAATAAAGAAACATTTCCTAGAAAA TAACTTCTGCTGCTAGCTCTATTGTGCCTACAAAGTTTCTTGGACTTGTTGAGATGATATATACTGCATTAGTTTTATGG GCACACTGATTTTATTGGTTACTTGAACATTATGCTAATGATGAAAAATGTGGAATTTTTGTTTTTATCTTATCAGATCT CCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACT GTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGC TCTTAGTCCTGCTAGTTAA
CDS sequence (LotjaGi1g1v0548100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAATGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAACCTTCTGGAAC TGTTCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGGTGGTAAATGGTGCTCTTG AGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTACAAGGGTGGATTGTCAGCACACTACTTGCTGGTGCT ACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAACTAGGACTTTTCAGTTGGACGCAATCCCTCT GGCAATCGGAGGATTTCTTTGTGCTACAGCCCAGAGTGTTCAAACATTAATCATCGGTCGCTTGCTAGCTGGTATAGGAA TTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTT AATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTGGAG GACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGC TTTATCAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATG CATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAA AGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTG TTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCACTATTGTT GCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGCTGCTTCTATGTTGCT GCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTGTCCTCTATGTCT TATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCA ATTTCTTTATCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGG CATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTA AAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
Protein sequence (LotjaGi1g1v0548100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQMRNCIADEDVEDLLPTNTLGKPSGTVLPYVGVSCLGAILFGYHLGVVNGALEYLAKDLGITQNTVLQGWIVSTLLAGA TVGSFTGGALADKFGRTRTFQLDAIPLAIGGFLCATAQSVQTLIIGRLLAGIGIGVTSAIVPLYISEISPTEIRGALGSV NQLFICIGILAALVAGLPLAGNPTWWRTMFGITVVPSILLALGMAISPESPRWLYQQGKISEAEKAIKTLYGKERVASVM HDLAAASQGSSEPEARWFDLFSSRYRKVVSVGAALFLFQQFAGINAVVYYSTSVFRSAGIASDVAASALVGASNVFGTIV ASSLMDRQGRKSLLITSFSGMAASMLLLSLAFTWKVLAPFSGTLEVIGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKA ISLSLGTHWISNFVIGLYFLSVVDKFGISTVYLGFSTVCLLAVLYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 4 | 467 | 464 | 1.4E-285 | – | |
| PANTHER | 4 | 467 | 464 | 1.4E-285 | – | |
| TIGRFAM | 13 | 461 | 449 | 6.0E-102 | ||
| SUPERFAMILY | 17 | 462 | 446 | 1.57E-66 | ||
| Gene3D | 23 | 466 | 444 | 1.5E-123 | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 28 | 48 | 21 | - | – | |
| ProSiteProfiles | 31 | 454 | 424 | 51.574 | ||
| CDD | 34 | 452 | 419 | 3.01115E-136 | – | |
| Pfam | 35 | 464 | 430 | 1.1E-105 | ||
| PRINTS | 39 | 49 | 11 | 9.5E-24 | ||
| Phobius | 49 | 67 | 19 | - | – | |
| Phobius | 68 | 90 | 23 | - | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Phobius | 91 | 101 | 11 | - | – | |
| Phobius | 102 | 118 | 17 | - | – | |
| Phobius | 119 | 123 | 5 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| PRINTS | 124 | 143 | 20 | 9.5E-24 | ||
| Phobius | 124 | 145 | 22 | - | – | |
| ProSitePatterns | 129 | 154 | 26 | - | ||
| Phobius | 146 | 156 | 11 | - | – | |
| Phobius | 157 | 179 | 23 | - | – | |
| TMHMM | 160 | 182 | 23 | - | – | |
| Phobius | 180 | 184 | 5 | - | – | |
| Phobius | 185 | 206 | 22 | - | – | |
| Phobius | 207 | 267 | 61 | - | – | |
| Phobius | 268 | 292 | 25 | - | – | |
| TMHMM | 268 | 290 | 23 | - | – | |
| PRINTS | 279 | 289 | 11 | 9.5E-24 | ||
| Phobius | 293 | 303 | 11 | - | – | |
| TMHMM | 300 | 322 | 23 | - | – | |
| Phobius | 304 | 321 | 18 | - | – | |
| Phobius | 322 | 332 | 11 | - | – | |
| Phobius | 333 | 354 | 22 | - | – | |
| TMHMM | 334 | 356 | 23 | - | – | |
| Phobius | 355 | 365 | 11 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| PRINTS | 366 | 387 | 22 | 9.5E-24 | ||
| Phobius | 366 | 388 | 23 | - | – | |
| Phobius | 389 | 399 | 11 | - | – | |
| PRINTS | 389 | 401 | 13 | 9.5E-24 | ||
| TMHMM | 400 | 422 | 23 | - | – | |
| Phobius | 400 | 420 | 21 | - | – | |
| Phobius | 421 | 425 | 5 | - | – | |
| Phobius | 426 | 447 | 22 | - | – | |
| TMHMM | 426 | 448 | 23 | - | – | |
| Phobius | 448 | 469 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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