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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|A0A151SXG3|A0A151SXG3_CAJCA Plastidic glucose transporter 4; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795601..107801141) extracted from Lotus japonicus Gifu genome v1.2.
TTATCAATTTTGGGGGAGTGCTGCTTATCATTGGTTGACAATGCAAATGGCTAATTTCATCCTTGTTGCAATGAGTTAGA AACCATACTCAGATTCTGTAATCTGTAAACATAATGCATGTTTGAAAGACCATGTTAGCGTCTATTGTATTTTATCCTTT ATAGATGCCTTTTATATTATCTGTTGATGGCTCTTCATTTCATATGTATGTTATCAATGTGTTTATTTCCGTCTAATTAT GCTAAGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAAACCTTCTGGAACTGT TCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGTATGAATTTCATCTCCATTTAG GGTGCATTTGGATAAACAAATTAATTAAGTGCTTATTCATAAGCAGTTATTGCATAAGCGCTTATTCATAAGCTAACTTG ATAAGCTTACAAAAATAAGTTCAAAATAGATTATAGGTAGGTATAAGCACTGGTTCATAAGTTAACCAGAGCAGCTTATG AGAATAAACTCAAAACAACTTATAGGTAGGTTATAGGCTATTTATATAAGCTCTCACAAACACTTGCGTAAACGCTTATG CTATAAGAGAAGTTCAAATAAGCTCTTCCAAACAGGGTTTTAGTATGTAGTTCAATGGACTTATAATGCAGTGTATCATT TTCTTTATACTGCCATCCAAGTTAAGTGAATGGTGTAAGCCACTTCTTGAAGTTGTAAGTTATAGGCTGCATGATACATA CTGGAGTCTTATTTTGAGTTTTTTTTTGTTGTAATGCTGAATTTCATTGGTTATTATTCTTAGGTGGGAAACTCTGATAA TGCCCTGTTTGGTGTAGGGTGGTAAATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACT ACAAGGTCTTTTAACTTTGTTGGTTGTAGTTGCAAATGAGCTTCAAGTTTGATTGATTTTATCAGCAAAGACATTGGAGA TGTTTGCACAAACACTCTTTCTTATTTTTTACCTCTTATGTTTTCATTTGTAGTGTGTAACAATGAAAGCTTTCAGGATA CATGTAAACATAGATTTTTTACTTGTTAATGCTACATTTATATCAACAAGAAAAAGTTTTATGGCATGGAGTTTAGGTAG ATTTATTTATCACTATTAAATGTTTGGCTTATCAAAAAAAACTATTGAATGTTTGTGGAAAATCTACATGTCACTGATCT TTAAACTCTATATCTCAAAATTTTGTATGCTCCTGCATTTGTTTTTTTCATGATTTTAATGAGTTAAATCCATGAACAGG GTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAA CTAGGACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAGGATTTCTTTGGTCTGTCATTTGTCCTCAATGTATTGTT TGATCTTTTATGCAATTTTGAAATCTGACTCTTGAAATTTTAATACATTTACAGTGCTACAGCCCAGAGTGTTCAAACAT TAATCATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGGTTGTC TCTTTGTAAATTATTTAACCCTTTGTGACAATGTTTGCATATTTTAGAAGAACTACATGCTCATGGTGACTCCTTGTGAT TTACAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGC ACTAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTATTGGGTTGTTTCATCTTGCCATTTTTTTCAGCTGTTTG TTTCTTCTGAGGATAATGATCATCTAGAGAGCTTGTATATTCATTATATAAGTTAGTCAAATTACTATATTATTAGCTTA TTCTATGTAAAATTTTAGAAGTCAAAGAAATCATTATGAGAAAGAGAGTGGAGAAATATGTATTAGTCATTGTTAATTTT CTTTAATGTGTGTAAATTTTCGCTCCCTTTATCATTTTTTTCTTCTGATTCTGTCCCTGTCTCATCAGTAGTATGTGCAT TGTATTACTTGGAGGATCTGGAATAATTTGTTGATTTGTTTCTTATAAATTTGTTGTTGTCGTACTAGAGGTGGTAGAAA CCATGGAATTTGTTTTTCATTGTGAACACTAAGTTGGTTCCCTGTAATTGGCTTTGTGAATTTATGTTCGTTAACATGTG CTCTCTTCTACCTTATGTAACTTTTATTAGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCAC TTGGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATCAGGTAAGGCTGTCCTTCAATACTATGTTTTCTTTTGTC ATGGGAACAATACACTTAGATGACAAGGAAAACTACTGTTGCAAAATGATAGGTACGTGGTTTAGTTAGTTAAGTGAGGT AGTTATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAGGCTTGCTGCCTATAAATAAGAAGGGGTTAGGGAACATT AATCATCTTTTGTATTCTGTTGGAATTGGGGTTTAGGGAGAGCATTGGGTTTCTCTCTAGGTTTTGGAAGAGTGTTTGGC ATTTCTGCTCTAATTCCCAAATTAGGGATTAGGGTTCTTCAATAATACATCTACAATTTCTGGTTTCTATCACAAAACTA TACATTCTCTAAGTTTATTTCCTATTCATTTCACATGCCTATTTGCAAATACACTACTAGCTTTTTTAAAGAAAAGAGCA CGTGTTACTTTCTAAGTCTCTATTGACATCCTTAAAAATTTTAAATGGATTAAAATTTAGAGTGATGGTAGTCGTGCACA ATCTTAATCCAATGAAAAAGATATGAGCATTTATATGGTGTCGAGTTCTTTTGAAGCGTACATCATTAAGAGTTTAGCAC AATACAAATAATATTTTTGAATATTTTCTGAGAAGATGACATTTGTAATTTTACAGCAAGGGAAAATCTCTGAAGCTGAA AAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTC TGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGGTATTCCAAAATCCAAATAGTTAAGACTAA TTCCAGATTTGATTAACAATGAACAAAGGTTTTCTAGTTATAAGATCTGTTGCAAAGGACTGTTATTATTTATACCTTCA TCATTTAATTTTATATGCTTGTTTCTATCGGTGCTAATATGCAGCTTTTGAAGTTCTGATCATATATGTATATATAGGGG GCATATCAGGTGAGAGGAGTTTTTATTGTGAGAGATGAGAACATTTAATCTTGACGTACAACCATACGTTGGGGATTGAG ATTAAAAAAGTCATGTGACCTTTTGTTTTAAGCTTAGCCATTCATGGTTAGATCTAATGGTCAATATTTACTCCTCTCAT CTCTCACGATAAGAAGTTCTCTCACCTGATACATTTGCTATATATATGATAGCACAATCTTAGTGATAATTTTCATGGAT GGTGATTCATGGGACTATTGAAGTCAATAGTCTTGCTTCAACCTTAAAGCCAATGCTTAGTGATATATGATACCTCATGC ATGAGACTGTCTTTTACTTTTTGAATTTGTTCACAACTTACTTTTCTTTTTAGTCTTTTGCCTGATAGCATAGAGGTATA TCTTAAATAATATCTCAGCATATTTTATGTTTAAGTTCCACTGCTCAACTTCTTTTTAGTTTGTTCCGGAATTGATTCGT GGTTAATGAATTGGTGTAGCACTTCTCTGAAATATTCCTTGCTGCAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCC AGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCC GCAAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCAAGTACTTTGCATTCTAAAAAGTGAATTATGCTCAAACATTATA TTGTTTCTCACTAATGTTTGATTTTGTTGCAGGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCC TCCTTATCACAAGCTTTAGTGGGATGGTAATGAATATTTTCGAATCACTTCTTTGAATCACATTCTTTGAGAATCATATT TTTGAATCACATTTGTCTTTCCCAGGCTGCTTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCAT TCTCTGGCACACTAGAGGTCATCGGCACTGTCCTGTAAGTCATAAAATTTTGTCAATAAAACTAATTCCATTAACAGAGA AGCTACCTGGTGTTGTTTGTTTTTCATTTCACCTCTAACTTTGTTATATGAATTTTGAGCAGCTATGTCTTATCTTTCTC TCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTAT CATTAGGCACACATTGGGTAAGTGACTTAATTGGAATCTTGTATCACCTGTAATTCCTTCCCTTATCCTGCTATTAAAAA ACCTGAGTGAATAGTCACTTTCGCCCTTAAAAGTTATGAGGTCGGTCGACTTAGTCTCGGAAATATGGAAATAGACAAAA TAGTCACTGAAAGATAAAAGGCATTCAATTTATTCCTTGAAAGATGAAAATCACGATCAATATATTGAAAGATTAAATTG AAATTTGATTTCTCATCTTTGAGGGACTATTTTGTTTATTTGCTTAGTAGGGGATGAAACTGACCGATCTTATATTCATG GACTAAAGTGACTATTTACTCAAAAAACTCACCATTGAGATGCTAAAATGATAGCTTAAGTGGTATTTTTAAATGGTAGG GTGGCATCCTAATTGTGAGCTTACCAAACCAAAATTTTGCTTCTTAGAGAATGAAGTAACCAAAAACCATAGAGAAGCCA TACTAAACTCAGCCATACAACTTTGCTTGTGCCTGCTGCTACTCTTGAATGATACATAAATAAAGAAACATTTCCTAGAA AATAACTTCTGCTGCTAGCTCTATTGTGCCTACAAAGTTTCTTGGACTTGTTGAGATGATATATACTGCATTAGTTTTAT GGGCACACTGATTTTATTGGTTACTTGAACATTATGCTAATGATGAAAAATGTGGAATTTTTGTTTTTATCTTATCAGAT CTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTA CTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGT GCTCTTAGTCCTGCTAGTTAA
CDS sequence (LotjaGi1g1v0548100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTA TCAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCAGTTATGCATG ACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATATAGGAAAGTT GTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTTCTGTTTT TCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCACTATTGTTGCTT CCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGCTGCTTCTATGTTGCTGCTT TCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTGTCCTCTATGTCTTATC TTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATCAGAGCAAAAGCAATTT CTTTATCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGACAAGTTTGGCATC AGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTGTGGAAACTAAAGG TCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
Protein sequence (LotjaGi1g1v0548100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGITVVPSILLALGMAISPESPRWLYQQGKISEAEKAIKTLYGKERVASVMHDLAAASQGSSEPEARWFDLFSSRYRKV VSVGAALFLFQQFAGINAVVYYSTSVFRSAGIASDVAASALVGASNVFGTIVASSLMDRQGRKSLLITSFSGMAASMLLL SLAFTWKVLAPFSGTLEVIGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAISLSLGTHWISNFVIGLYFLSVVDKFGI STVYLGFSTVCLLAVLYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 278 | 278 | 8.7E-74 | – | |
| ProSiteProfiles | 1 | 266 | 266 | 19.821 | ||
| Pfam | 1 | 276 | 276 | 1.6E-65 | ||
| PANTHER | 1 | 279 | 279 | 2.1E-167 | – | |
| SUPERFAMILY | 1 | 274 | 274 | 1.15E-30 | ||
| PANTHER | 1 | 279 | 279 | 2.1E-167 | – | |
| Phobius | 1 | 79 | 79 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| CDD | 79 | 264 | 186 | 2.06942E-66 | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 80 | 104 | 25 | - | – | |
| PRINTS | 91 | 101 | 11 | 7.1E-9 | ||
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| Phobius | 116 | 133 | 18 | - | – | |
| Phobius | 134 | 144 | 11 | - | – | |
| Phobius | 145 | 166 | 22 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 167 | 177 | 11 | - | – | |
| Phobius | 178 | 200 | 23 | - | – | |
| PRINTS | 178 | 199 | 22 | 7.1E-9 | ||
| TMHMM | 178 | 200 | 23 | - | – | |
| PRINTS | 201 | 213 | 13 | 7.1E-9 | ||
| Phobius | 201 | 211 | 11 | - | – | |
| Phobius | 212 | 232 | 21 | - | – | |
| TMHMM | 212 | 234 | 23 | - | – | |
| Phobius | 233 | 237 | 5 | - | – | |
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 238 | 259 | 22 | - | – | |
| Phobius | 260 | 281 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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