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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0548100 |
| Transcript ID | LotjaGi1g1v0548100.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexose transporter; TAIR: AT5G16150.1 plastidic GLC translocator; Swiss-Prot: sp|Q56ZZ7|PLST4_ARATH Plastidic glucose transporter 4; TrEMBL-Plants: tr|G7KUB8|G7KUB8_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi1g1v0548100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107795601..107801179) extracted from Lotus japonicus Gifu genome v1.2.
ATCAAAATAAAATGTCTCAGACATGTTTCTTTGCTCTCTTATCAATTTTGGGGGAGTGCTGCTTATCATTGGTTGACAAT GCAAATGGCTAATTTCATCCTTGTTGCAATGAGTTAGAAACCATACTCAGATTCTGTAATCTGTAAACATAATGCATGTT TGAAAGACCATGTTAGCGTCTATTGTATTTTATCCTTTATAGATGCCTTTTATATTATCTGTTGATGGCTCTTCATTTCA TATGTATGTTATCAATGTGTTTATTTCCGTCTAATTATGCTAAGCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTT CTCCCCACTAATACCCTAGGCAAACCTTCTGGAACTGTTCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATT TGGTTATCATCTTGGGTATGAATTTCATCTCCATTTAGGGTGCATTTGGATAAACAAATTAATTAAGTGCTTATTCATAA GCAGTTATTGCATAAGCGCTTATTCATAAGCTAACTTGATAAGCTTACAAAAATAAGTTCAAAATAGATTATAGGTAGGT ATAAGCACTGGTTCATAAGTTAACCAGAGCAGCTTATGAGAATAAACTCAAAACAACTTATAGGTAGGTTATAGGCTATT TATATAAGCTCTCACAAACACTTGCGTAAACGCTTATGCTATAAGAGAAGTTCAAATAAGCTCTTCCAAACAGGGTTTTA GTATGTAGTTCAATGGACTTATAATGCAGTGTATCATTTTCTTTATACTGCCATCCAAGTTAAGTGAATGGTGTAAGCCA CTTCTTGAAGTTGTAAGTTATAGGCTGCATGATACATACTGGAGTCTTATTTTGAGTTTTTTTTTGTTGTAATGCTGAAT TTCATTGGTTATTATTCTTAGGTGGGAAACTCTGATAATGCCCTGTTTGGTGTAGGGTGGTAAATGGTGCTCTTGAGTAC CTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTACAAGGTCTTTTAACTTTGTTGGTTGTAGTTGCAAATGAGCT TCAAGTTTGATTGATTTTATCAGCAAAGACATTGGAGATGTTTGCACAAACACTCTTTCTTATTTTTTACCTCTTATGTT TTCATTTGTAGTGTGTAACAATGAAAGCTTTCAGGATACATGTAAACATAGATTTTTTACTTGTTAATGCTACATTTATA TCAACAAGAAAAAGTTTTATGGCATGGAGTTTAGGTAGATTTATTTATCACTATTAAATGTTTGGCTTATCAAAAAAAAC TATTGAATGTTTGTGGAAAATCTACATGTCACTGATCTTTAAACTCTATATCTCAAAATTTTGTATGCTCCTGCATTTGT TTTTTTCATGATTTTAATGAGTTAAATCCATGAACAGGGTGGATTGTCAGCACACTACTTGCTGGTGCTACTGTCGGTTC ATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAACTAGGACTTTTCAGTTGGACGCAATCCCTCTGGCAATCGGAG GATTTCTTTGGTCTGTCATTTGTCCTCAATGTATTGTTTGATCTTTTATGCAATTTTGAAATCTGACTCTTGAAATTTTA ATACATTTACAGTGCTACAGCCCAGAGTGTTCAAACATTAATCATCGGTCGCTTGCTAGCTGGTATAGGAATTGGTGTTA CATCTGCAATTGTACCACTGTACATATCTGAGGTTGTCTCTTTGTAAATTATTTAACCCTTTGTGACAATGTTTGCATAT TTTAGAAGAACTACATGCTCATGGTGACTCCTTGTGATTTACAGATTTCTCCTACTGAAATTCGTGGTGCTCTTGGATCT GTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCCTACATGGTA TTGGGTTGTTTCATCTTGCCATTTTTTTCAGCTGTTTGTTTCTTCTGAGGATAATGATCATCTAGAGAGCTTGTATATTC ATTATATAAGTTAGTCAAATTACTATATTATTAGCTTATTCTATGTAAAATTTTAGAAGTCAAAGAAATCATTATGAGAA AGAGAGTGGAGAAATATGTATTAGTCATTGTTAATTTTCTTTAATGTGTGTAAATTTTCGCTCCCTTTATCATTTTTTTC TTCTGATTCTGTCCCTGTCTCATCAGTAGTATGTGCATTGTATTACTTGGAGGATCTGGAATAATTTGTTGATTTGTTTC TTATAAATTTGTTGTTGTCGTACTAGAGGTGGTAGAAACCATGGAATTTGTTTTTCATTGTGAACACTAAGTTGGTTCCC TGTAATTGGCTTTGTGAATTTATGTTCGTTAACATGTGCTCTCTTCTACCTTATGTAACTTTTATTAGGTGGAGGACAAT GTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAAGCCCCCGGTGGCTTTATC AGGTAAGGCTGTCCTTCAATACTATGTTTTCTTTTGTCATGGGAACAATACACTTAGATGACAAGGAAAACTACTGTTGC AAAATGATAGGTACGTGGTTTAGTTAGTTAAGTGAGGTAGTTATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAG GCTTGCTGCCTATAAATAAGAAGGGGTTAGGGAACATTAATCATCTTTTGTATTCTGTTGGAATTGGGGTTTAGGGAGAG CATTGGGTTTCTCTCTAGGTTTTGGAAGAGTGTTTGGCATTTCTGCTCTAATTCCCAAATTAGGGATTAGGGTTCTTCAA TAATACATCTACAATTTCTGGTTTCTATCACAAAACTATACATTCTCTAAGTTTATTTCCTATTCATTTCACATGCCTAT TTGCAAATACACTACTAGCTTTTTTAAAGAAAAGAGCACGTGTTACTTTCTAAGTCTCTATTGACATCCTTAAAAATTTT AAATGGATTAAAATTTAGAGTGATGGTAGTCGTGCACAATCTTAATCCAATGAAAAAGATATGAGCATTTATATGGTGTC GAGTTCTTTTGAAGCGTACATCATTAAGAGTTTAGCACAATACAAATAATATTTTTGAATATTTTCTGAGAAGATGACAT TTGTAATTTTACAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTTGCTTCA GTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAGCCGATA TAGGAAAGGTATTCCAAAATCCAAATAGTTAAGACTAATTCCAGATTTGATTAACAATGAACAAAGGTTTTCTAGTTATA AGATCTGTTGCAAAGGACTGTTATTATTTATACCTTCATCATTTAATTTTATATGCTTGTTTCTATCGGTGCTAATATGC AGCTTTTGAAGTTCTGATCATATATGTATATATAGGGGGCATATCAGGTGAGAGGAGTTTTTATTGTGAGAGATGAGAAC ATTTAATCTTGACGTACAACCATACGTTGGGGATTGAGATTAAAAAAGTCATGTGACCTTTTGTTTTAAGCTTAGCCATT CATGGTTAGATCTAATGGTCAATATTTACTCCTCTCATCTCTCACGATAAGAAGTTCTCTCACCTGATACATTTGCTATA TATATGATAGCACAATCTTAGTGATAATTTTCATGGATGGTGATTCATGGGACTATTGAAGTCAATAGTCTTGCTTCAAC CTTAAAGCCAATGCTTAGTGATATATGATACCTCATGCATGAGACTGTCTTTTACTTTTTGAATTTGTTCACAACTTACT TTTCTTTTTAGTCTTTTGCCTGATAGCATAGAGGTATATCTTAAATAATATCTCAGCATATTTTATGTTTAAGTTCCACT GCTCAACTTCTTTTTAGTTTGTTCCGGAATTGATTCGTGGTTAATGAATTGGTGTAGCACTTCTCTGAAATATTCCTTGC TGCAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATTACTCAACTT CTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCAAATGTTTTTGGCAAGTAC TTTGCATTCTAAAAAGTGAATTATGCTCAAACATTATATTGTTTCTCACTAATGTTTGATTTTGTTGCAGGCACTATTGT TGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGTAATGAATATTTTCG AATCACTTCTTTGAATCACATTCTTTGAGAATCATATTTTTGAATCACATTTGTCTTTCCCAGGCTGCTTCTATGTTGCT GCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTGTCCTGTAAGTCA TAAAATTTTGTCAATAAAACTAATTCCATTAACAGAGAAGCTACCTGGTGTTGTTTGTTTTTCATTTCACCTCTAACTTT GTTATATGAATTTTGAGCAGCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGAT ATTTGCATCTAGGATCAGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGGTAAGTGACTTAATTGGAATCTTGT ATCACCTGTAATTCCTTCCCTTATCCTGCTATTAAAAAACCTGAGTGAATAGTCACTTTCGCCCTTAAAAGTTATGAGGT CGGTCGACTTAGTCTCGGAAATATGGAAATAGACAAAATAGTCACTGAAAGATAAAAGGCATTCAATTTATTCCTTGAAA GATGAAAATCACGATCAATATATTGAAAGATTAAATTGAAATTTGATTTCTCATCTTTGAGGGACTATTTTGTTTATTTG CTTAGTAGGGGATGAAACTGACCGATCTTATATTCATGGACTAAAGTGACTATTTACTCAAAAAACTCACCATTGAGATG CTAAAATGATAGCTTAAGTGGTATTTTTAAATGGTAGGGTGGCATCCTAATTGTGAGCTTACCAAACCAAAATTTTGCTT CTTAGAGAATGAAGTAACCAAAAACCATAGAGAAGCCATACTAAACTCAGCCATACAACTTTGCTTGTGCCTGCTGCTAC TCTTGAATGATACATAAATAAAGAAACATTTCCTAGAAAATAACTTCTGCTGCTAGCTCTATTGTGCCTACAAAGTTTCT TGGACTTGTTGAGATGATATATACTGCATTAGTTTTATGGGCACACTGATTTTATTGGTTACTTGAACATTATGCTAATG ATGAAAAATGTGGAATTTTTGTTTTTATCTTATCAGATCTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGTAGA CAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACGTTG TGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
CDS sequence (LotjaGi1g1v0548100.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCAGACATGTTTCTTTCGAAATTGCATTGCAGATGAAGATGTAGAGGATCTTCTCCCCACTAATACCCTAGGCAA ACCTTCTGGAACTGTTCTGCCCTATGTTGGCGTTTCTTGCCTTGGAGCCATTTTATTTGGTTATCATCTTGGGGTGGTAA ATGGTGCTCTTGAGTACCTTGCGAAGGATCTTGGAATCACTCAAAACACTGTACTACAAGGGTGGATTGTCAGCACACTA CTTGCTGGTGCTACTGTCGGTTCATTCACTGGTGGAGCATTGGCTGACAAATTCGGCCGAACTAGGACTTTTCAGTTGGA CGCAATCCCTCTGGCAATCGGAGGATTTCTTTGTGCTACAGCCCAGAGTGTTCAAACATTAATCATCGGTCGCTTGCTAG CTGGTATAGGAATTGGTGTTACATCTGCAATTGTACCACTGTACATATCTGAGATTTCTCCTACTGAAATTCGTGGTGCT CTTGGATCTGTTAATCAACTTTTTATATGTATTGGGATTCTTGCAGCACTAGTGGCTGGTTTACCTCTGGCAGGAAATCC TACATGGTGGAGGACAATGTTTGGAATTACTGTAGTTCCTTCTATTTTGTTAGCACTTGGAATGGCAATTTCTCCAGAAA GCCCCCGGTGGCTTTATCAGCAAGGGAAAATCTCTGAAGCTGAAAAGGCTATTAAAACACTGTATGGAAAAGAAAGAGTT GCTTCAGTTATGCATGACTTGGCAGCAGCAAGTCAAGGTTCTTCTGAACCTGAAGCACGATGGTTTGATTTGTTTAGTAG CCGATATAGGAAAGTTGTCAGTGTAGGGGCAGCACTTTTCTTGTTCCAGCAGTTTGCTGGAATCAATGCCGTGGTATATT ACTCAACTTCTGTTTTTCGCAGTGCTGGAATTGCTTCGGACGTTGCCGCAAGTGCCCTGGTTGGTGCATCAAATGTTTTT GGCACTATTGTTGCTTCCTCCTTGATGGACCGGCAAGGAAGGAAAAGCCTCCTTATCACAAGCTTTAGTGGGATGGCTGC TTCTATGTTGCTGCTTTCTCTGGCTTTCACTTGGAAGGTCCTTGCACCATTCTCTGGCACACTAGAGGTCATCGGCACTG TCCTCTATGTCTTATCTTTCTCTCTTGGTGCCGGTCCCGTGCCTGCCCTTCTTCTACCAGAGATATTTGCATCTAGGATC AGAGCAAAAGCAATTTCTTTATCATTAGGCACACATTGGATCTCCAACTTTGTCATCGGACTCTATTTCTTGAGTGTTGT AGACAAGTTTGGCATCAGCACCGTGTACTTGGGGTTCTCTACTGTGTGTCTTCTTGCTGTCTTGTACATTGCTGGTAACG TTGTGGAAACTAAAGGTCGTTCATTGGAAGAAATAGAACGTGCTCTTAGTCCTGCTAGTTAA
Protein sequence (LotjaGi1g1v0548100.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQTCFFRNCIADEDVEDLLPTNTLGKPSGTVLPYVGVSCLGAILFGYHLGVVNGALEYLAKDLGITQNTVLQGWIVSTL LAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGGFLCATAQSVQTLIIGRLLAGIGIGVTSAIVPLYISEISPTEIRGA LGSVNQLFICIGILAALVAGLPLAGNPTWWRTMFGITVVPSILLALGMAISPESPRWLYQQGKISEAEKAIKTLYGKERV ASVMHDLAAASQGSSEPEARWFDLFSSRYRKVVSVGAALFLFQQFAGINAVVYYSTSVFRSAGIASDVAASALVGASNVF GTIVASSLMDRQGRKSLLITSFSGMAASMLLLSLAFTWKVLAPFSGTLEVIGTVLYVLSFSLGAGPVPALLLPEIFASRI RAKAISLSLGTHWISNFVIGLYFLSVVDKFGISTVYLGFSTVCLLAVLYIAGNVVETKGRSLEEIERALSPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 7 | 471 | 465 | 1.1E-285 | – | |
| PANTHER | 7 | 471 | 465 | 1.1E-285 | – | |
| TIGRFAM | 17 | 465 | 449 | 7.0E-102 | ||
| SUPERFAMILY | 21 | 466 | 446 | 2.09E-66 | ||
| Gene3D | 27 | 470 | 444 | 1.5E-123 | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| Phobius | 32 | 52 | 21 | - | – | |
| ProSiteProfiles | 35 | 458 | 424 | 51.574 | ||
| CDD | 38 | 456 | 419 | 5.2843E-136 | – | |
| Pfam | 39 | 468 | 430 | 1.1E-105 | ||
| PRINTS | 43 | 53 | 11 | 9.9E-24 | ||
| Phobius | 53 | 71 | 19 | - | – | |
| Phobius | 72 | 94 | 23 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| Phobius | 106 | 122 | 17 | - | – | |
| Phobius | 123 | 127 | 5 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| PRINTS | 128 | 147 | 20 | 9.9E-24 | ||
| Phobius | 128 | 149 | 22 | - | – | |
| ProSitePatterns | 133 | 158 | 26 | - | ||
| Phobius | 150 | 160 | 11 | - | – | |
| Phobius | 161 | 183 | 23 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 184 | 188 | 5 | - | – | |
| Phobius | 189 | 210 | 22 | - | – | |
| Phobius | 211 | 271 | 61 | - | – | |
| Phobius | 272 | 296 | 25 | - | – | |
| TMHMM | 272 | 294 | 23 | - | – | |
| PRINTS | 283 | 293 | 11 | 9.9E-24 | ||
| Phobius | 297 | 307 | 11 | - | – | |
| TMHMM | 304 | 326 | 23 | - | – | |
| Phobius | 308 | 325 | 18 | - | – | |
| Phobius | 326 | 336 | 11 | - | – | |
| Phobius | 337 | 358 | 22 | - | – | |
| TMHMM | 338 | 360 | 23 | - | – | |
| Phobius | 359 | 369 | 11 | - | – | |
| PRINTS | 370 | 391 | 22 | 9.9E-24 | ||
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 370 | 392 | 23 | - | – | |
| Phobius | 393 | 403 | 11 | - | – | |
| PRINTS | 393 | 405 | 13 | 9.9E-24 | ||
| Phobius | 404 | 424 | 21 | - | – | |
| TMHMM | 404 | 426 | 23 | - | – | |
| Phobius | 425 | 429 | 5 | - | – | |
| Phobius | 430 | 451 | 22 | - | – | |
| TMHMM | 430 | 452 | 23 | - | – | |
| Phobius | 452 | 473 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0548100.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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