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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0555500 |
| Transcript ID | LotjaGi1g1v0555500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Monosaccharide-sensing protein 2; TAIR: AT4G35300.1 tonoplast monosaccharide transporter2; Swiss-Prot: sp|Q8LPQ8|MSSP2_ARATH Monosaccharide-sensing protein 2; TrEMBL-Plants: tr|V7AYH1|V7AYH1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0555500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108799902..108804740) extracted from Lotus japonicus Gifu genome v1.2.
CAAACAATGAGTTCAGCTGTTCTTGTTGCTGTTGCTGCTGCTATTGGTAACTTACTTCAAGGATGGGATAATGCCACTAT TGCAGGTCTGTCTGTCTCTCTGATTCCCTCTCTCAAGATAGATAGATAGAAAGAAACATTGATAGAAGAAATATTTGGTT TGGTTGATTAATTTTGTATGTTTCATTTCATCTACTTAAAAAATAGTAGTAATTAATAACCTGATAGATAACATCATAAT TCAACTGCAGGATCTATTTTATACATTAAGAGGGAGTTTCAATTAGAAAGTCAGCCCACAGTGGAAGGTCTTATTGTGGC TATGTCACTTATTGGGGCAACCGTCGTTACTACATTCTCCGGAGCGCTATCGGACTTGCTAGGCCGGCGTCCCATGTTGA TTATCTCCTCTGTCCTTTATTTTCTTAGTTCTCTTGTCATGCTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGA CTTTTAGATGGATTGGGGATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGATAGCTCCTCCTGAGATTAG GGGATTACTCAATACACTTCCACAGTTCACTGGTTCTGCTGGAATGTTTTTCTCCTACTGTATGGTCTTTGGGATGTCAC TCACCAAGGCGCCTAGCTGGAGGCTCATGTTGGGTGTTCTTTCAATCCCCTCTCTTATTTATTTTGGATTCACACTATTC TTCTTGCCCGAGTCTCCAAGATGGCTTGTCAGTAAAGGTCGTATGCTTCAGGCTAAGAAGGTTTTGCAGCGCCTTCGTGG AAGGGAAGATGTTTCTGGTTAGTTCGAAATCAATTACTTGCTCTCTTGCATTACTTTCATGCTCCAATAGATCTTAACTT CATGTTTTTAGACTAATCATACAGGATACTTCTAAAACTTTGTCAGTATATATATGCTTGCTGGATATTCACTTTTTCAC TTCAGGCCAGGGTGATTATATTTGTATTCTATCACCCTAATCTGTTCCACTTGGGAAATTTATCCATTTACTTGCTTTTG GTTCTACCGCATTAATTAATCTGTATATATCCATGATTTTAACACAATTGTCCTTGGGCATGAACAGGTGAGATGGCTTT ATTGGTTGAGGGTCTTGGAGTAGGGGGTGATACAGCCATCGAAGAATACATAATTGGTCCTGCCAATGAATTTACTGATG AAGAGGATCCATCTGCAGGTAAAGATCAGATCAAGTTGTATGGGCACGAACGAGGTCAGTCCTGGGTTGCCAAACCTGCT CAGAGTTCCATTGGCCTTATGTCTCGGAAAGGAAGCATGGCAAATCAGAGACAGGGTAGTCTAGCGGTGGATCCTTTAGT CACCCTTTTTGGTAGTGTCCATGAGAAGCTCCCGGAGACAGGAAGCATGACCCTTTTTCCACACTTCGGAAGCATGTTTA GTGTTGGGGGAAATCAGACGAGGAATGAAGAATGGGATGAAGAAAGCCTTAGAGAGGGTGATGATGATGTCTCTGATGCT GCTGCTGGTGATTCTGATGACAATTTGCAGAGCCCGTTGATCTCACGTCAAGCAACAAGTATTGATAAGGACATACCTCC TGCTGCTCATGATAGCCTTTCGAGCATGAGGCAAGGTAGTCTTTTACAAGGAAATGCAGGAGAACCTGCTGGTAGTACTG AGATTGGTGGTGGTTGGCAACTAGCGTGGAAATGGTCTGAACGAGAAGGCTCAGATGGAAAGAAGGAAGGTGGTTATAAG AGAATATATTTACACCAAGAGGGTGGTCCTGGATCTAGACGTGGGTCTGTGGTTTCACTTCCTGGTGATGTGCCAACAGA TCATGGTGAGGTCATACAAGTTGCTGCTCTAGTGAGTCAACCAGCCCTTTATAATAAGGAGCTTATGCATCAACAACCAG TGGGACCAGCTATGATTCATCCATCTGAAACAACTGCAAAAGGGCCAAGTTGGAGTGATCTTTTTGAACCTGGTGTTAAG CATGCACTAATTGTCGGGGTGGGACTTCAAATTCTTCAGCAGGTAATAACATTGTCAACCTCTTCCGTGTTTTTTGTTTC CATCTGTTGTAATGTTGTGCTTCAATATTTGTTATTGCTTTGTGATGAAACAATCATTGTGCTGTATCCACTATCCGGGA GAGGGGGGGGGGGGGATTGTTATAGCTCTTGTTGTCTTTCTTGAAAATGTTGAACAGGCAAGGACAGCGTTTATCGTCAT CATCTGGCCCTCTTTACTTTTTGATACAGCTTAAGTTCATATTTTGTATGACTCCCTCTTTATTGTATTTGTTAGAATAT TAGGATTCTTAATATTTAAGGAGTCTTTTGATGTTAGTAGTCATACTGAACTAGGGCTTGTACTGCATGAGTAGTTTACC AAGATAGTAGTATAAATCGATATACACATAACTCCTCTCAAGTCGTTTGTCACGACCTGAAACCCAAACTGTGACTACTT GGGTTATTCCATGTATTATTCAAGGGAAATTTTTAGAGTTACACTTACATTTGTTTCTTAGTAGATAAAATAGGTAAATG TTAGGTAGTCATTTAAGTGTAACCCAAGTAGTTATTTAAGTATGGAATAACTACTTGAGACACAGTTTGGTAAATGTGTA CCTGGAAATTATTCAAGGCAAATTTCTTTGAATTTGAAAAATAAATTTTTGAATTCTGTTTTGAAGAACTAAAATAATTT ACTTGGTATTTATTGATGAAGCGATATGCGCATTAATGTATCTATAACTTAAAATGAAATTGTGAATACCATTTTAATTT CAAAATGGCCAGATTATCCCTATTATTATTTAGTCAATGGCATTGTTTAGGAATTTGCGACTATAATTAGGGTTCCATTT TAGTAAAGTAAAAACAGTTTACGTGATATCTATATGATTTAGTGGCATATGATATTAAATCCAACTTTGATGAAATTGTG TCAAAAAGTATTTGCACATATTAGATTATTATTAAATCTTGTTTGGATTTCCTATCTTTGATGCTGTAAAAAGGAAGCGC CACTTGGATTGGAGCTCCTTTTTATTTACCACAAAATACTTCCTATGTGTTAGAATCCTTTGTGTAATGAACTACATTTC ATTTTTTAAAATGTTACAATGAATCCTTTGTGTTAAAGTTATAAATATAAAATCATTCATGTGTCCTTTACCCAACAACC AAGAACTTAAGCTTTTGGGATAATTGGTTCATGACATGGTATCAGTCTCTTTGACCAAGTGGTCTATAGAGTTCGATCCT TGTTGCCCCCAAATTATTCTAATAAAAAGTTGAATTTCAGCAAAGTAGGTGAGTCGGTACAATGTCCACGCTTCAAGCCG AATAAGCTTATGCGTGAGGGGGTGTTCAAAATAAAATATAAAACTCTTAATGTATCCTTTACCCAACAACTTAAGTTTTT GTGATAATTTGTTCTTGACACTTTTGATTAACAGGAGTTTCTGCCTTTTGATTTGGAACTCATCTAATAGCTAGCAATGC TACTATAGAGGCACATGTACTTGCAACGTTCTATTGAGAAAAGGAACAATTGTGATTTGTGAAAGTTATTGATAAAATGT TTCCAGCTTAGGAACAGTTAACTCACTTAAGTGGCCACTTAAATCAATAATGTATCATTCATTAACCAATATTATCAAGC TGGAAACTTATTTAACTTCCCATTGAATCAATGCAGTTCTCAGGTATCAATGGTGTCCTGTACTATACACCTCAAATTCT TGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACCTGGGCCTTGGTTCAACTTCTTCATCTTTTCTTATAAGTGCTTTGA CAACATTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGCAGAAGGTATTCATCTCCTCCT TACCATTTTCTACTTACACCTTCTTCTCATACAGTAAGAAATATGTTTTAATTTGAAAATATATGTTTTAGAGTTCTCTT TATAATTTTATTTCTATTGGTTTTTCCCGACTTTAGTGTATCTATGGTTCTCTACCAATATCTCATTTTTACTTTTGAAG GAATATTGGTGTTTGGTTATTTTAGTTTAGTAATTCTTGCAGTTGTCAAGAATAGTGAATAATGTAGGGTTTTAAAAACG GACCATCATTAGAGATAATTCTTGAAATTGTTCTCTTTATGATTTGTTTAGTGTCAGAAGGTTCTGAAAAAGGTAAGAGC TCAATATTTGCTTAATTAGTTGCTCTTTATGCAAGGTTTAGTGCCCATTGCCCGGCAATGTGATTCCTCGTGTATTCCCC CACTGCTTGCCTGTGTTCATTCAGTTGCAGTACTCTTAAATAATGCTCTCTGTTTTTTCCTTTGTGCAGGACTTTGCTGC TGAGTACTATCCCAGTCTTGATAGCATCTCTTCTCATATTAGTCCTAGGGAGCCTTGTGGATTTGGGCAGTACGGTAAAT GCATCAATCGCAACTATTAGCGTTGTTGTCTATTTCTGTTCCTTTGTCATGGGTTTTGGGCCAGTACCTAATATACTTTG TGCTGAGATTTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCCATATGTGCTCTAACCTTTTGGATCAGTGACATCATTG TCACCTACACACTCCCAGTTATGCTTAACTCTGTTGGCCTCGCTGGTGTTTTTGGTATGTACGCAATCGTGTGTTGCATA GCTTGGGTGTTTGTCTTTCTCAAAGTTCCGGAAACTAAGGGCATGCCACTAGAAGTTATCATTGAGTTCTTCTCCGTCGG AGCTAAACAGATTGACGCTGCCCAGCATAACTAACTTAA
CDS sequence (LotjaGi1g1v0555500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCAGCTGTTCTTGTTGCTGTTGCTGCTGCTATTGGTAACTTACTTCAAGGATGGGATAATGCCACTATTGCAGG ATCTATTTTATACATTAAGAGGGAGTTTCAATTAGAAAGTCAGCCCACAGTGGAAGGTCTTATTGTGGCTATGTCACTTA TTGGGGCAACCGTCGTTACTACATTCTCCGGAGCGCTATCGGACTTGCTAGGCCGGCGTCCCATGTTGATTATCTCCTCT GTCCTTTATTTTCTTAGTTCTCTTGTCATGCTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGACTTTTAGATGG ATTGGGGATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGATAGCTCCTCCTGAGATTAGGGGATTACTCA ATACACTTCCACAGTTCACTGGTTCTGCTGGAATGTTTTTCTCCTACTGTATGGTCTTTGGGATGTCACTCACCAAGGCG CCTAGCTGGAGGCTCATGTTGGGTGTTCTTTCAATCCCCTCTCTTATTTATTTTGGATTCACACTATTCTTCTTGCCCGA GTCTCCAAGATGGCTTGTCAGTAAAGGTCGTATGCTTCAGGCTAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATG TTTCTGGTGAGATGGCTTTATTGGTTGAGGGTCTTGGAGTAGGGGGTGATACAGCCATCGAAGAATACATAATTGGTCCT GCCAATGAATTTACTGATGAAGAGGATCCATCTGCAGGTAAAGATCAGATCAAGTTGTATGGGCACGAACGAGGTCAGTC CTGGGTTGCCAAACCTGCTCAGAGTTCCATTGGCCTTATGTCTCGGAAAGGAAGCATGGCAAATCAGAGACAGGGTAGTC TAGCGGTGGATCCTTTAGTCACCCTTTTTGGTAGTGTCCATGAGAAGCTCCCGGAGACAGGAAGCATGACCCTTTTTCCA CACTTCGGAAGCATGTTTAGTGTTGGGGGAAATCAGACGAGGAATGAAGAATGGGATGAAGAAAGCCTTAGAGAGGGTGA TGATGATGTCTCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCAGAGCCCGTTGATCTCACGTCAAGCAACAAGTA TTGATAAGGACATACCTCCTGCTGCTCATGGTAGTACTGAGATTGGTGGTGGTTGGCAACTAGCGTGGAAATGGTCTGAA CGAGAAGGCTCAGATGGAAAGAAGGAAGGTGGTTATAAGAGAATATATTTACACCAAGAGGGTGGTCCTGGATCTAGACG TGGGTCTGTGGTTTCACTTCCTGGTGATGTGCCAACAGATCATGGTGAGGTCATACAAGTTGCTGCTCTAGTGAGTCAAC CAGCCCTTTATAATAAGGAGCTTATGCATCAACAACCAGTGGGACCAGCTATGATTCATCCATCTGAAACAACTGCAAAA GGGCCAAGTTGGAGTGATCTTTTTGAACCTGGTGTTAAGCATGCACTAATTGTCGGGGTGGGACTTCAAATTCTTCAGCA GTTCTCAGGTATCAATGGTGTCCTGTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACC TGGGCCTTGGTTCAACTTCTTCATCTTTTCTTATAAGTGCTTTGACAACATTGTTGATGCTTCCTTGTATAGCTGTTGCC ATGAGGCTCATGGATATTTCTGGCAGAAGGACTTTGCTGCTGAGTACTATCCCAGTCTTGATAGCATCTCTTCTCATATT AGTCCTAGGGAGCCTTGTGGATTTGGGCAGTACGGTAAATGCATCAATCGCAACTATTAGCGTTGTTGTCTATTTCTGTT CCTTTGTCATGGGTTTTGGGCCAGTACCTAATATACTTTGTGCTGAGATTTTCCCCACTCGAGTTCGTGGTCTCTGCATT GCCATATGTGCTCTAACCTTTTGGATCAGTGACATCATTGTCACCTACACACTCCCAGTTATGCTTAACTCTGTTGGCCT CGCTGGTGTTTTTGGTATGTACGCAATCGTGTGTTGCATAGCTTGGGTGTTTGTCTTTCTCAAAGTTCCGGAAACTAAGG GCATGCCACTAGAAGTTATCATTGAGTTCTTCTCCGTCGGAGCTAAACAGATTGACGCTGCCCAGCATAACTAA
Protein sequence (LotjaGi1g1v0555500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFQLESQPTVEGLIVAMSLIGATVVTTFSGALSDLLGRRPMLIISS VLYFLSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLTKA PSWRLMLGVLSIPSLIYFGFTLFFLPESPRWLVSKGRMLQAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIIGP ANEFTDEEDPSAGKDQIKLYGHERGQSWVAKPAQSSIGLMSRKGSMANQRQGSLAVDPLVTLFGSVHEKLPETGSMTLFP HFGSMFSVGGNQTRNEEWDEESLREGDDDVSDAAAGDSDDNLQSPLISRQATSIDKDIPPAAHGSTEIGGGWQLAWKWSE REGSDGKKEGGYKRIYLHQEGGPGSRRGSVVSLPGDVPTDHGEVIQVAALVSQPALYNKELMHQQPVGPAMIHPSETTAK GPSWSDLFEPGVKHALIVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISALTTLLMLPCIAVA MRLMDISGRRTLLLSTIPVLIASLLILVLGSLVDLGSTVNASIATISVVVYFCSFVMGFGPVPNILCAEIFPTRVRGLCI AICALTFWISDIIVTYTLPVMLNSVGLAGVFGMYAIVCCIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQIDAAQHN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Gene3D | 1 | 257 | 257 | 7.6E-60 | – | |
| PANTHER | 3 | 710 | 708 | 5.7E-293 | – | |
| PANTHER | 3 | 710 | 708 | 5.7E-293 | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| SUPERFAMILY | 6 | 698 | 693 | 3.14E-61 | ||
| ProSiteProfiles | 7 | 693 | 687 | 35.219 | ||
| Pfam | 7 | 221 | 215 | 3.5E-54 | ||
| TMHMM | 10 | 32 | 23 | - | – | |
| CDD | 13 | 210 | 198 | 6.98854E-64 | – | |
| PRINTS | 15 | 25 | 11 | 2.1E-17 | ||
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 62 | 20 | - | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 63 | 73 | 11 | - | – | |
| ProSitePatterns | 63 | 80 | 18 | - | ||
| TMHMM | 70 | 92 | 23 | - | – | |
| Phobius | 74 | 92 | 19 | - | – | |
| Phobius | 93 | 97 | 5 | - | – | |
| Phobius | 98 | 121 | 24 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| PRINTS | 100 | 119 | 20 | 2.1E-17 | ||
| ProSitePatterns | 105 | 130 | 26 | - | ||
| Phobius | 122 | 132 | 11 | - | – | |
| Phobius | 133 | 157 | 25 | - | – | |
| TMHMM | 136 | 158 | 23 | - | – | |
| Phobius | 158 | 162 | 5 | - | – | |
| Phobius | 163 | 185 | 23 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 186 | 494 | 309 | - | – | |
| MobiDBLite | 330 | 365 | 36 | - | – | |
| MobiDBLite | 341 | 355 | 15 | - | – | |
| Gene3D | 451 | 706 | 256 | 2.0E-54 | – | |
| Pfam | 479 | 701 | 223 | 2.0E-40 | ||
| CDD | 494 | 691 | 198 | 1.39479E-68 | – | |
| Phobius | 495 | 518 | 24 | - | – | |
| PRINTS | 506 | 516 | 11 | 2.1E-17 | ||
| Phobius | 519 | 537 | 19 | - | – | |
| Phobius | 538 | 560 | 23 | - | – | |
| TMHMM | 542 | 564 | 23 | - | – | |
| Phobius | 561 | 571 | 11 | - | – | |
| TMHMM | 571 | 593 | 23 | - | – | |
| Phobius | 572 | 593 | 22 | - | – | |
| Phobius | 594 | 598 | 5 | - | – | |
| Phobius | 599 | 626 | 28 | - | – | |
| TMHMM | 603 | 625 | 23 | - | – | |
| PRINTS | 605 | 626 | 22 | 2.1E-17 | ||
| Phobius | 627 | 637 | 11 | - | – | |
| PRINTS | 628 | 640 | 13 | 2.1E-17 | ||
| TMHMM | 638 | 660 | 23 | - | – | |
| Phobius | 638 | 658 | 21 | - | – | |
| Phobius | 659 | 663 | 5 | - | – | |
| Phobius | 664 | 687 | 24 | - | – | |
| TMHMM | 665 | 687 | 23 | - | – | |
| Phobius | 688 | 717 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0555500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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