Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0557700.2

Overview

Field Value
Gene ID LotjaGi1g1v0557700
Transcript ID LotjaGi1g1v0557700.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Glutamate-1-semialdehyde 2,1-aminomutase; TAIR: AT3G48730.1 glutamate-1-semialdehyde 2,1-aminomutase 2; Swiss-Prot: sp|P45621|GSA_SOYBN Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; TrEMBL-Plants: tr|A0A1J7G7D4|A0A1J7G7D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0557700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:109001992..109002552) extracted from Lotus japonicus Gifu genome v1.2.

ATGACTGGATTTCGTTTGTCATATGGAGGTGCTCAAGAATATTTTGGCATAACTCCTGATTTAACAACTCTAGGAAAGAT CATCGGTGGGGGTCTGCCAGTAGGCGCTTACGGAGGGAGGAGGGAAATTATGCAGATGGTGGCACCAGCAGGACCAATGT ACCAGGCTGGGACCTTGAGTGGTAACCCTTTGGCCATGACTGCTGGCATACAAACTCTGAAGCGTATTAAGGAGCCAGGG ACTTACCAATACTTGGACAAAATTACAGGTGAGCTTGTTCAAGGCATCGTTGAAGCTGGTAAGAAGGCAGGCCATGCAAT ATGTGGTGGGCATATAGGTGGTATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGCACAATTTCACAGATGCCAAAAAAA GTGATGCGGACAAGTTTGTTAGGTTCTTCTGGGGAATGTTAGAGGAAGGTGTGTATTTGGCACCTTCACAATTTGAGGCT GGCTTCACCAGCTTGGCACATACTTCTGATGACATCAAAAAGACCATAGCTGCTGCCGAGAAGGTTTTCAGGCAGATTTG A
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0557700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGGATTTCGTTTGTCATATGGAGGTGCTCAAGAATATTTTGGCATAACTCCTGATTTAACAACTCTAGGAAAGAT CATCGGTGGGGGTCTGCCAGTAGGCGCTTACGGAGGGAGGAGGGAAATTATGCAGATGGTGGCACCAGCAGGACCAATGT ACCAGGCTGGGACCTTGAGTGGTAACCCTTTGGCCATGACTGCTGGCATACAAACTCTGAAGCGTATTAAGGAGCCAGGG ACTTACCAATACTTGGACAAAATTACAGGTGAGCTTGTTCAAGGCATCGTTGAAGCTGGTAAGAAGGCAGGCCATGCAAT ATGTGGTGGGCATATAGGTGGTATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGCACAATTTCACAGATGCCAAAAAAA GTGATGCGGACAAGTTTGTTAGGTTCTTCTGGGGAATGTTAGAGGAAGGTGTGTATTTGGCACCTTCACAATTTGAGGCT GGCTTCACCAGCTTGGCACATACTTCTGATGACATCAAAAAGACCATAGCTGCTGCCGAGAAGGTTTTCAGGCAGATTTG A
Download CDS Sequence

Protein sequence (LotjaGi1g1v0557700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTGFRLSYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRREIMQMVAPAGPMYQAGTLSGNPLAMTAGIQTLKRIKEPG TYQYLDKITGELVQGIVEAGKKAGHAICGGHIGGMFGFFFTEGPVHNFTDAKKSDADKFVRFFWGMLEEGVYLAPSQFEA GFTSLAHTSDDIKKTIAAAEKVFRQI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43713
1 186 186 1.9E-110 –
PANTHER
PTHR43713:SF5
1 186 186 1.9E-110 –
Gene3D
G3DSA:3.40.640.10
1 78 78 1.7E-69
IPR015421
SUPERFAMILY
SSF53383
1 185 185 1.18E-46
IPR015424
Pfam
PF00202
11 155 145 8.4E-18
IPR005814
Gene3D
G3DSA:3.90.1150.10
79 178 100 1.7E-69
IPR015422

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0008483
Molecular function Transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0557700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…