Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0566100 |
| Transcript ID | LotjaGi1g1v0566100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109954739..109959623) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCTATTGAATACGGAACTTAAAATTTCGTACTGTATTTAAGCATGCGTGTCACATTTTCAATCACTCATTATATACT AAAACAGATACGGAATTTTATTTTCCGTATTGATACGGAACTTTAAATTCCGTATTTAATAAAGTGGGGTGCAAAGCCTA AGGGGTGGGGCACCAAACTCAATTCCCCACACTCACACGTACCTAGAAATTTGGACAATGGTGATTGAAGCAGCTCATCA TGGACTATGAACATTTTTCTAGTATATAATGCTTTTGTCTGGAGATTGCCATTAGATTTTTCCAACCTTTCTCGTGAGGG GTAAAGGCAACCCCCTAACTTCACCACCACTCGATCCAGTTGCCTTCTATAATCACTTTGATCGCTTCTCTGGATTGGAT TCCCATCCATCAAAGTAATTTAGTTGACTTTTCAGTAGAATAGACATCATCTTTGATCTTCTTCAGCATTTGCTTCAATT AAGGTTTTTCTTTTTGTTAATTAATACTATACTATATTTTTTTGTCAGCTTTGTGTAATGCACACTTCACTTGGTTTGAT TTTGCTCACAGTTGAAATTGTGTGTGTTATCTGCTTTTTTTAGCTTGCAAGGACTTTTGACTCATTCATCAGCATCTGGG TTCTTCTTAGAAGCTGAGTTGAGGTCACTGCAATGGCGTCTGCTTGTGTGACCTTGAAAGCCAACACCACCCATCTAGCA AACTCAGAAAAAGGTTTCCTTTTTGGTCAAGACAATGGCTTTTTAGGGGAAAGAGTTAAAGGTGCCTGGGGGATGAATCA GTTGGGTAAATGTTTGACAGCTCAGAAGAGGGTTAAATCTGGGGCTGTATCTGCTGTTCTTACTTCAAATGATGCCAAAG AAGCCCTGGTAAGCTGAACTTTACTCTTGGATTCATCTTCTACTTCCCATTTCCAAACCTTCTAAATGTGTGTTTGGAAA CCCTTGTCAATGTGAAAAGTGATTCTAGGAAAAGCTATCAGAAGTAGCTTTTATGGGGGGAAGAAGTGATTATAAAGTTG GGCACTTTACTTTGTTTATGGGGCTGCATTTGTATTTAGTATTTTAGTATGATATGAGTGTGTTTGAATTTCAGACTTTG CAAGTGCCTTCATTCCTGAGACGAAAAGCTGATCCAAAAAATGTTATTTCTATCATATTGGGAGGAGGACCTGGGACACA CCTCTTTCCTCTTACCAAACGATCTGCTACACCTGCGGTGAGTGATTCGTAGTCCATGTTTGGAAATTATTCTACAATTG ATTCTAAGGCTAAAATTATTTTTGGGGAGAAATTCTGTGAGTAGCTTATTGATTGACGACAGAATTGATTTTGAGGAAAA AATAAGTTGATCCAAACATAGTGATAGTTGTTATTTGAATCCTAGCATACTGGAGTTCAATGTTGTGATGATGTGGTGTG TGCTGGGTTTCCAGGTCCCAGTTGGTGGGTGCTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTAGCCTC AACAAGATATTTGTGCTAACCCAGTTCAACTCTGCATCCCTCAACCGTCACATCTCCCGCACCTATTTCGGAAATGGCGT CAACTTTGGGGATGGATTTGTAGAGGTATGCAACTATGCATGCATCACCATCACATAAAGGGATGGGAATTAGTTTTCTT TCTTTTTTATATGAATTAGATGTTGAAGCTACTCATAAAGCAAATTCACTTTGCCTAAAATGATAAAAACATTCAATTAC TCATAAAGTATGTAATTCTTAAAGAAACTCTACCCTACATTGATGGAAAAATATAATCCACTTCTGAGATTCTTGTTCCC CAATTTCAAGTTTTTTTTGGTTCCTGATGACTAATCAAACCAACCCAATTGTCAAACAGGTTCTGGCTGCTACTCAAACA CCAGGAGAGGCGGGAAAGAAGTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGTGGGCAT TTTTTGATTTTTTCTACACGCCCTCTCTTATTTCGAACTTGTCCATAAGTAACAGGTTCGTTGTTGTAGGATGCCAAAAA CAGAAATGTCGAAAATGTATTGATCTTGGCTGGCGATCATCTATACCGAATGGATTACATGGACCTTGTTCAGGTATACA GTGTAGTATTTTTTTTAGAGGGGATAGTTTCTTCATTTCATTTTCTTAATTTCTCTGACTTATCTATAACAAATAAACAG AGTCACGTTGATAGAAATGCCGATATTACAGTTTCATGTGCTGCTGTGGGTAACAGGTGTGTTCAATATTCTGTTAGATG TGTTTCTTTTTGTTGCTTGATATCATTATGATGCCAAGATAACATTATACTCAATTTTATTCTAGATTGAGCGAATAGAG ATAACTTACTTCATGAAAACAGAATGTTTACCAATTAATTGCCTGCTTTTCAGCCGTGCATCGGATTATGGGTTGGTCAA GGTTGATGGCAGAGGCAGTATCATCCAATTTTCAGAAAAACCAAAGGGTGCTGATCTGAAAGCAATGGTAATTCACAAGC TTACCCAATGCTTGCATCTTCTTTCTGTTTTCTTGTCATATGGTGATTCTACTGAGGTCATTCACTATCAGAAACCAAAA TTAAATTACCATCCTCAGTTTCAACAGTCATTTCTCATTCTTCTAAGGATGAGTGTGTTAGCACAATAGCATATCCTATG GTTTTTATATTTGAAGACAGAATAACTTGTTATACATCACAGGGTAGCATTGTAAATTTTATACGCTTAATTTATTTCAA AAGCATGCTGATATAGATTAAAATGTACCCATTATATAGTTTAATTTGCAAATTTCTGTCCTGATTAAATGCCGGTGTCT CAGCTTTGCCGGTGTCTCAGCTTTTTCTTCTAGTCATAGTTATGTAATTTTTCTACAGACTTACAGGCAACCCCCTAACT TCTTGTCATGTGTTCCTGTGTTATACTGTGCAGCAAGCAGATACTTCTCTTCTTGGGTTGTCACTCCATGATGCTTTGGA ATCACCATATATTGCATCAATGGGGGTTTATGTATTCAAGACAGATGTTTTACTTAAGCTTCTGAAATGGAGATATCCTA CATCGAATGACTTTGGATCTGAAATCATTCCTTCAGCTGTAAAGGAATACGATGTCCAAGTAAGAGGAATTTCAATAAAT ATATCATCTTCCAAATGCTTTTCCCCATTTCAGAAAGTCTTATCTTCCAAGTTAAATATGAGGTGCTAATTAAACCTATG ACGGATGTAACAATGATAAGTTAAACATCTGTTGTTTTTGCAGTCATATATTTTCAGAGATTATTGGGAAGACATTGGCA CAATAAAATCCTTTTATGATGCTAACCTTGCTCTTACAGAAGAGGTGGGTTCAAACGATTTACTGTTGGCATGTACTTTA ACAGAATATTTATAGAAGATATTGGCACAATATAATTCTCAATGTTATTCAATTTATTGAAACTAACATGTGCTTGATGA TACTCTCTTGTAGAGTCCAAAGTTCAAATTCTATGATCCGAAGACACCCATTTTCACATCTCCAGGATTCCTTCCTCCTA CAAAGATTGATAAATGTCGGGTATGATAATCTATCTTTCATCAAGCTAGTAGTGTCATGAGATGTCTTGCTTATTCTGTT TTGAATTGTTTTGGTAGGTTGTCGATGCCATTATCTCCCATGGATGTTTCCTGCGAGAATGCACTGTCCAACACTCCATT GTAGGTGAACGCTCACGTTTAGATTATGGTGTTGATCTTCAGGTAAAGTGGCATAAATTCTAGAATCTAGATCAGCACGC TTAAACATTTTATTTAAGACACATCCTAACTGTAAAATCACCATTCACAGGACACCATAATGATGGGAGCAGATTATTAC CAAACTGAATCTGAAATTGCTTCTCTGCTGGCAGAGGGGAAGGTCCCTATTGGGATCGGACGAAATACCAAAATCAGGTA ACTTTTTTCTCCTGTAGCATGTTTTGATCAGCTTCTATTTCCTTAGAATCAATTCTAAATCAGAACAGCTTCTCACCAGA ATTGATTTTGACTTTAGAATCAATTGAAAGAATTTTCAAACATGTCATGGGTCAATGATGAAAAATTAGCATTGTCACAT ACCAATTCTATTTATTATTGCCAACTCATAGTCATGAAATTGTTACATTATGTATCATCTATGTTGAAGGAACTGTATTA TAGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCACCAACAAAGATGTAAGCATGATTACTACTACTCTTTCTGAC CATGCTATTTCAAGCAACTAGTAGTTTTCTGGTTCAGTACCATTGTGTTGTACCTATGATAAGTATCCTATTTATGGTGT CAAACGCATTCTCTGCAGGGCGTTCAAGAAGCGGATAGATCAGAAGATGGGTTTTACATTCGATCAGGAATCACCATTGT AATGGAGAAGGCAACAATAGAAGATGGCACAGTCATATAAATGGTTTTGAGTGCTTATTTCATGAGCTGAGTTACTCAAA GGCCTTGGAAGAAGAAGCATTATGGGGAACAACACTTCAACCTTTGGGGACAGAAGGGTAGCTGTTCCAATGCTTTGTTC AACACAGAAAGCAGTTCCCTGTTTGCTATAATGTTGTAAAATAGAGTCTCCCCCACTACTACATGTAAAAATAGAATGAA TAAAAACATGAAAATCAAGATGCTCAAAAGTGAAGCGAATAAATTGAAGAGTTGACCGTGAGCTTCAGATGTTGTATATG TTTGGGGTTGCATTTTGTAATTCGGAGCATGATTATTTGCGACCATTAACATAATTAGAATATCCCTTAACTTGTTCTGA GAAAA
CDS sequence (LotjaGi1g1v0566100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTGCTTGTGTGACCTTGAAAGCCAACACCACCCATCTAGCAAACTCAGAAAAAGGTTTCCTTTTTGGTCAAGA CAATGGCTTTTTAGGGGAAAGAGTTAAAGGTGCCTGGGGGATGAATCAGTTGGGTAAATGTTTGACAGCTCAGAAGAGGG TTAAATCTGGGGCTGTATCTGCTGTTCTTACTTCAAATGATGCCAAAGAAGCCCTGACTTTGCAAGTGCCTTCATTCCTG AGACGAAAAGCTGATCCAAAAAATGTTATTTCTATCATATTGGGAGGAGGACCTGGGACACACCTCTTTCCTCTTACCAA ACGATCTGCTACACCTGCGGTCCCAGTTGGTGGGTGCTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTA GCCTCAACAAGATATTTGTGCTAACCCAGTTCAACTCTGCATCCCTCAACCGTCACATCTCCCGCACCTATTTCGGAAAT GGCGTCAACTTTGGGGATGGATTTGTAGAGGTTCTGGCTGCTACTCAAACACCAGGAGAGGCGGGAAAGAAGTGGTTCCA AGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAAAACAGAAATGTCGAAAATGTATTGATCT TGGCTGGCGATCATCTATACCGAATGGATTACATGGACCTTGTTCAGAGTCACGTTGATAGAAATGCCGATATTACAGTT TCATGTGCTGCTGTGGGTAACAGCCGTGCATCGGATTATGGGTTGGTCAAGGTTGATGGCAGAGGCAGTATCATCCAATT TTCAGAAAAACCAAAGGGTGCTGATCTGAAAGCAATGCAAGCAGATACTTCTCTTCTTGGGTTGTCACTCCATGATGCTT TGGAATCACCATATATTGCATCAATGGGGGTTTATGTATTCAAGACAGATGTTTTACTTAAGCTTCTGAAATGGAGATAT CCTACATCGAATGACTTTGGATCTGAAATCATTCCTTCAGCTGTAAAGGAATACGATGTCCAATCATATATTTTCAGAGA TTATTGGGAAGACATTGGCACAATAAAATCCTTTTATGATGCTAACCTTGCTCTTACAGAAGAGAGTCCAAAGTTCAAAT TCTATGATCCGAAGACACCCATTTTCACATCTCCAGGATTCCTTCCTCCTACAAAGATTGATAAATGTCGGGTTGTCGAT GCCATTATCTCCCATGGATGTTTCCTGCGAGAATGCACTGTCCAACACTCCATTGTAGGTGAACGCTCACGTTTAGATTA TGGTGTTGATCTTCAGGACACCATAATGATGGGAGCAGATTATTACCAAACTGAATCTGAAATTGCTTCTCTGCTGGCAG AGGGGAAGGTCCCTATTGGGATCGGACGAAATACCAAAATCAGGAACTGTATTATAGACAAGAATGCAAAGATTGGGAAA GATGTCATCATCACCAACAAAGATGGCGTTCAAGAAGCGGATAGATCAGAAGATGGGTTTTACATTCGATCAGGAATCAC CATTGTAATGGAGAAGGCAACAATAGAAGATGGCACAGTCATATAA
Protein sequence (LotjaGi1g1v0566100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASACVTLKANTTHLANSEKGFLFGQDNGFLGERVKGAWGMNQLGKCLTAQKRVKSGAVSAVLTSNDAKEALTLQVPSFL RRKADPKNVISIILGGGPGTHLFPLTKRSATPAVPVGGCYRLIDIPMSNCINSSLNKIFVLTQFNSASLNRHISRTYFGN GVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNRNVENVLILAGDHLYRMDYMDLVQSHVDRNADITV SCAAVGNSRASDYGLVKVDGRGSIIQFSEKPKGADLKAMQADTSLLGLSLHDALESPYIASMGVYVFKTDVLLKLLKWRY PTSNDFGSEIIPSAVKEYDVQSYIFRDYWEDIGTIKSFYDANLALTEESPKFKFYDPKTPIFTSPGFLPPTKIDKCRVVD AIISHGCFLRECTVQHSIVGERSRLDYGVDLQDTIMMGADYYQTESEIASLLAEGKVPIGIGRNTKIRNCIIDKNAKIGK DVIITNKDGVQEADRSEDGFYIRSGITIVMEKATIEDGTVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 521 | 521 | 0.0 | – | |
| PANTHER | 1 | 521 | 521 | 0.0 | – | |
| Gene3D | 75 | 386 | 312 | 5.9E-89 | ||
| SUPERFAMILY | 87 | 482 | 396 | 9.3E-70 | ||
| TIGRFAM | 89 | 486 | 398 | 2.5E-140 | ||
| Pfam | 91 | 367 | 277 | 4.2E-75 | ||
| CDD | 92 | 352 | 261 | 1.90403E-76 | – | |
| ProSitePatterns | 95 | 114 | 20 | - | ||
| ProSitePatterns | 185 | 193 | 9 | - | ||
| ProSitePatterns | 300 | 310 | 11 | - | ||
| SUPERFAMILY | 384 | 521 | 138 | 6.23E-24 | ||
| Gene3D | 387 | 521 | 135 | 3.1E-49 | – | |
| CDD | 389 | 515 | 127 | 1.24758E-27 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Glycogen biosynthetic process | The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. | ||
| Molecular function | Glucose-1-phosphate adenylyltransferase activity | Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi1g1v0566100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…