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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0566100 |
| Transcript ID | LotjaGi1g1v0566100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1K764|I1K764_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0566100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109956190..109959258) extracted from Lotus japonicus Gifu genome v1.2.
CAGGTCCCAGTTGGTGGGTGCTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTAGCCTCAACAAGATATT TGTGCTAACCCAGTTCAACTCTGCATCCCTCAACCGTCACATCTCCCGCACCTATTTCGGAAATGGCGTCAACTTTGGGG ATGGATTTGTAGAGGTATGCAACTATGCATGCATCACCATCACATAAAGGGATGGGAATTAGTTTTCTTTCTTTTTTATA TGAATTAGATGTTGAAGCTACTCATAAAGCAAATTCACTTTGCCTAAAATGATAAAAACATTCAATTACTCATAAAGTAT GTAATTCTTAAAGAAACTCTACCCTACATTGATGGAAAAATATAATCCACTTCTGAGATTCTTGTTCCCCAATTTCAAGT TTTTTTTGGTTCCTGATGACTAATCAAACCAACCCAATTGTCAAACAGGTTCTGGCTGCTACTCAAACACCAGGAGAGGC GGGAAAGAAGTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGTGGGCATTTTTTGATTTT TTCTACACGCCCTCTCTTATTTCGAACTTGTCCATAAGTAACAGGTTCGTTGTTGTAGGATGCCAAAAACAGAAATGTCG AAAATGTATTGATCTTGGCTGGCGATCATCTATACCGAATGGATTACATGGACCTTGTTCAGGTATACAGTGTAGTATTT TTTTTAGAGGGGATAGTTTCTTCATTTCATTTTCTTAATTTCTCTGACTTATCTATAACAAATAAACAGAGTCACGTTGA TAGAAATGCCGATATTACAGTTTCATGTGCTGCTGTGGGTAACAGGTGTGTTCAATATTCTGTTAGATGTGTTTCTTTTT GTTGCTTGATATCATTATGATGCCAAGATAACATTATACTCAATTTTATTCTAGATTGAGCGAATAGAGATAACTTACTT CATGAAAACAGAATGTTTACCAATTAATTGCCTGCTTTTCAGCCGTGCATCGGATTATGGGTTGGTCAAGGTTGATGGCA GAGGCAGTATCATCCAATTTTCAGAAAAACCAAAGGGTGCTGATCTGAAAGCAATGGTAATTCACAAGCTTACCCAATGC TTGCATCTTCTTTCTGTTTTCTTGTCATATGGTGATTCTACTGAGGTCATTCACTATCAGAAACCAAAATTAAATTACCA TCCTCAGTTTCAACAGTCATTTCTCATTCTTCTAAGGATGAGTGTGTTAGCACAATAGCATATCCTATGGTTTTTATATT TGAAGACAGAATAACTTGTTATACATCACAGGGTAGCATTGTAAATTTTATACGCTTAATTTATTTCAAAAGCATGCTGA TATAGATTAAAATGTACCCATTATATAGTTTAATTTGCAAATTTCTGTCCTGATTAAATGCCGGTGTCTCAGCTTTGCCG GTGTCTCAGCTTTTTCTTCTAGTCATAGTTATGTAATTTTTCTACAGACTTACAGGCAACCCCCTAACTTCTTGTCATGT GTTCCTGTGTTATACTGTGCAGCAAGCAGATACTTCTCTTCTTGGGTTGTCACTCCATGATGCTTTGGAATCACCATATA TTGCATCAATGGGGGTTTATGTATTCAAGACAGATGTTTTACTTAAGCTTCTGAAATGGAGATATCCTACATCGAATGAC TTTGGATCTGAAATCATTCCTTCAGCTGTAAAGGAATACGATGTCCAAGTAAGAGGAATTTCAATAAATATATCATCTTC CAAATGCTTTTCCCCATTTCAGAAAGTCTTATCTTCCAAGTTAAATATGAGGTGCTAATTAAACCTATGACGGATGTAAC AATGATAAGTTAAACATCTGTTGTTTTTGCAGTCATATATTTTCAGAGATTATTGGGAAGACATTGGCACAATAAAATCC TTTTATGATGCTAACCTTGCTCTTACAGAAGAGGTGGGTTCAAACGATTTACTGTTGGCATGTACTTTAACAGAATATTT ATAGAAGATATTGGCACAATATAATTCTCAATGTTATTCAATTTATTGAAACTAACATGTGCTTGATGATACTCTCTTGT AGAGTCCAAAGTTCAAATTCTATGATCCGAAGACACCCATTTTCACATCTCCAGGATTCCTTCCTCCTACAAAGATTGAT AAATGTCGGGTATGATAATCTATCTTTCATCAAGCTAGTAGTGTCATGAGATGTCTTGCTTATTCTGTTTTGAATTGTTT TGGTAGGTTGTCGATGCCATTATCTCCCATGGATGTTTCCTGCGAGAATGCACTGTCCAACACTCCATTGTAGGTGAACG CTCACGTTTAGATTATGGTGTTGATCTTCAGGTAAAGTGGCATAAATTCTAGAATCTAGATCAGCACGCTTAAACATTTT ATTTAAGACACATCCTAACTGTAAAATCACCATTCACAGGACACCATAATGATGGGAGCAGATTATTACCAAACTGAATC TGAAATTGCTTCTCTGCTGGCAGAGGGGAAGGTCCCTATTGGGATCGGACGAAATACCAAAATCAGGTAACTTTTTTCTC CTGTAGCATGTTTTGATCAGCTTCTATTTCCTTAGAATCAATTCTAAATCAGAACAGCTTCTCACCAGAATTGATTTTGA CTTTAGAATCAATTGAAAGAATTTTCAAACATGTCATGGGTCAATGATGAAAAATTAGCATTGTCACATACCAATTCTAT TTATTATTGCCAACTCATAGTCATGAAATTGTTACATTATGTATCATCTATGTTGAAGGAACTGTATTATAGACAAGAAT GCAAAGATTGGGAAAGATGTCATCATCACCAACAAAGATGTAAGCATGATTACTACTACTCTTTCTGACCATGCTATTTC AAGCAACTAGTAGTTTTCTGGTTCAGTACCATTGTGTTGTACCTATGATAAGTATCCTATTTATGGTGTCAAACGCATTC TCTGCAGGGCGTTCAAGAAGCGGATAGATCAGAAGATGGGTTTTACATTCGATCAGGAATCACCATTGTAATGGAGAAGG CAACAATAGAAGATGGCACAGTCATATAA
CDS sequence (LotjaGi1g1v0566100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAACTGCATCAACAGTAGCCTCAACAAGATATTTGTGCTAACCCAGTTCAACTCTGCATCCCTCAACCGTCACAT CTCCCGCACCTATTTCGGAAATGGCGTCAACTTTGGGGATGGATTTGTAGAGGTTCTGGCTGCTACTCAAACACCAGGAG AGGCGGGAAAGAAGTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAAAACAGA AATGTCGAAAATGTATTGATCTTGGCTGGCGATCATCTATACCGAATGGATTACATGGACCTTGTTCAGAGTCACGTTGA TAGAAATGCCGATATTACAGTTTCATGTGCTGCTGTGGGTAACAGCCGTGCATCGGATTATGGGTTGGTCAAGGTTGATG GCAGAGGCAGTATCATCCAATTTTCAGAAAAACCAAAGGGTGCTGATCTGAAAGCAATGCAAGCAGATACTTCTCTTCTT GGGTTGTCACTCCATGATGCTTTGGAATCACCATATATTGCATCAATGGGGGTTTATGTATTCAAGACAGATGTTTTACT TAAGCTTCTGAAATGGAGATATCCTACATCGAATGACTTTGGATCTGAAATCATTCCTTCAGCTGTAAAGGAATACGATG TCCAATCATATATTTTCAGAGATTATTGGGAAGACATTGGCACAATAAAATCCTTTTATGATGCTAACCTTGCTCTTACA GAAGAGAGTCCAAAGTTCAAATTCTATGATCCGAAGACACCCATTTTCACATCTCCAGGATTCCTTCCTCCTACAAAGAT TGATAAATGTCGGGTTGTCGATGCCATTATCTCCCATGGATGTTTCCTGCGAGAATGCACTGTCCAACACTCCATTGTAG GTGAACGCTCACGTTTAGATTATGGTGTTGATCTTCAGGACACCATAATGATGGGAGCAGATTATTACCAAACTGAATCT GAAATTGCTTCTCTGCTGGCAGAGGGGAAGGTCCCTATTGGGATCGGACGAAATACCAAAATCAGGAACTGTATTATAGA CAAGAATGCAAAGATTGGGAAAGATGTCATCATCACCAACAAAGATGGCGTTCAAGAAGCGGATAGATCAGAAGATGGGT TTTACATTCGATCAGGAATCACCATTGTAATGGAGAAGGCAACAATAGAAGATGGCACAGTCATATAA
Protein sequence (LotjaGi1g1v0566100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNCINSSLNKIFVLTQFNSASLNRHISRTYFGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNR NVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGNSRASDYGLVKVDGRGSIIQFSEKPKGADLKAMQADTSLL GLSLHDALESPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPSAVKEYDVQSYIFRDYWEDIGTIKSFYDANLALT EESPKFKFYDPKTPIFTSPGFLPPTKIDKCRVVDAIISHGCFLRECTVQHSIVGERSRLDYGVDLQDTIMMGADYYQTES EIASLLAEGKVPIGIGRNTKIRNCIIDKNAKIGKDVIITNKDGVQEADRSEDGFYIRSGITIVMEKATIEDGTVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 260 | 260 | 1.1E-72 | ||
| SUPERFAMILY | 1 | 356 | 356 | 5.89E-54 | ||
| PANTHER | 1 | 395 | 395 | 1.4E-263 | – | |
| PANTHER | 1 | 395 | 395 | 1.4E-263 | – | |
| Pfam | 1 | 241 | 241 | 1.2E-57 | ||
| ProSitePatterns | 59 | 67 | 9 | - | ||
| ProSitePatterns | 174 | 184 | 11 | - | ||
| SUPERFAMILY | 258 | 395 | 138 | 3.3E-24 | ||
| Gene3D | 261 | 395 | 135 | 1.8E-49 | – | |
| CDD | 263 | 389 | 127 | 1.72813E-27 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Glycogen biosynthetic process | The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. | ||
| Molecular function | Glucose-1-phosphate adenylyltransferase activity | Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi1g1v0566100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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