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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0593000 |
| Transcript ID | LotjaGi1g1v0593000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151T389|A0A151T389_CAJCA TMV resistance protein N; Found in the gene: LotjaGi1g1v0593000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113306018..113314093) extracted from Lotus japonicus Gifu genome v1.2.
CATAAACAAAGAAAATTTGATTACAATAAATGTCTGGGAGCTCTTCTTCGGCTGCTGCTGCAACAAGTGTTATGGCTCAT CCTTCTCCTGCTACAAAGTATGAAGTGTTTTTGAGCTTTAGAGGGGTGGACACTCGTAACAGCTTCACAACTTATCTTAA CGATAAACTTGTCTAGAAAAAAATCAAAACATTCATAGATTACAACATAGACAGAGGTAATAAGATCTCAGATGAGCTCT ACACAGGGATTGAAGAGTCCATGATTTATGTCATCATTTTCTCTCAAAACTATGCTTCTTCGGCGTGGTGTCTGAAGGAA CTTGTGAAGATCTGGGAATGCAAGGAGAAATATGGAAGGCATGTGATACCGGTTTTCTACAAGGTGGAACCAGCAACTAT TAAGTATCAACAGGGGAGTTATGAAAAAGCTTTCGCTGACCATATCAATCAAAAGCGGTTTGACGAGGAAGAAATAAAGA GTTGGAAAGTTGCTCTAAACAATGCAGCTGGACTCAAAGGCAACAGTGTAGATGACACCAGGTGACTATGTTTTGCCTTG ATTATTTTTTATTACATTAATAGGATGGCCTTAATTATAATATATAGGGTTAAATCAAGGTTAATAGGATGACACCAGGA AGACTAATGCTCTAGTTCCATTTGTATGTTCCAGACCAGAAATCAAGGTTGTTGATGGTATTGTGGAAGATATTGTAAAA AAATTAAATCGTTCTTTCTCAAGTACTGATGATCAAGGAATGGTTGGAATCGACAAACATATTGCACAGATGGAGTCCTT GTTGCAACTTGAGACAGAAGGTGTTCGGATCATAGGAATCTAGGGCATGGGAGGAATAGGTAAAACTACACTTGCTCGAG CACTACATAACAAACTGGCTTCCAAGTTCAGTTCCAGCTGCTGTGTTTTACATGCCCATAAAGAAATAGAAAGAGTTGGA ATAGACTCTCTACAAGCAAAAATCTTTTCCGAACTTCTAGACAACGAAGCTATCCCTTCCAATGGATTGGATTATGCAAT TGAAAGGATCAAACGAGCAAGGGTTCTCCTTATTCTTGATGATCTCAAAGATTCAAATCAACTTAAAGAATTAGTTGGTG GACATGACAACTTCGGCCAGGGAAGTAGAATCGTTATCACTAGCAGAGACAAGCAGGCGCTTCAGAAAGCTGAAGAAGAT AAAATATATCAAGTCACAAAGATGAGTGATGAAGACTCCCTACAACTCTTCAATTTAAATGCCTTTAAACAGAACCCTTC TGTAAAAACTTATAAGACCTTGGTAGAAAGGGTATTAGAATATGCTCAAGGGGTTCCATTAGTTCTCAATGTTTTGGGCA GGTTGCTTTGTGGTAAATCAATCAAAGTATGGGAAAGTATGCTAAAAAAGCTGCAAAAGTTTCCCCATCATGAGGTTTTC AATGTGTTGAAATTAAGTTATGATGGGCTGGATGATGAAGAGAAGGACATATTTCTTGAGATTGTTTGCTTCTATGTAGG CGAACTTGAGGACATAGCACTGGATTTACTAGATGGTTGTGGTTTTTCTGCTCACATTGGAATGGATGTTCTTAAAGATA GGGGACTTATATCTATTTCGCACCATCAAATCGTGATGCATGATCTAATACTGGAAATGGGCCTACAAATTGTTAGTCAA CAACACGTCAACAACAATCCTAGAAAACATGTTGGTTTATGCAAGTATGAAGAAATTTATAACAAGCAGGTATATTCTTT TGCATCTTAAACCCCTCTTGATATTTCACATAGTATAGTGGCCTTACTTCTCACATACTACTAAGCACTTAGCTGCTATT AAATTTCATGCAACCATGTTCTTTCATGTTTACTTATCTCTAATTCCTTGTATTTACTTCTAGGGGACGGATGCAATCAA TTTCCTCGGCGTGTGCAAAATAGAAGAAGATGAACTTGATCCTGAAACTTTCAAAAACATGCATAGTCTGAGAATACTCT ATTTCTATAAGTATATGTTAGAAGTCCCATATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCT CAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATT TGTTGTGTGGAGACATCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTCTGTTCAAATCCTGGACGTGAGGG GGTGTGTTAGCAACGGGTGGCCCAAATATGGGTGGTCTCCACAACAAATGGATCTAGGATAGGCTCTGATACCATATTAG AAATTGGGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACAACCTCAACTCTTATAAACACTTG ATTGGCCTTATCTCTAGCCAATGTGGGACTTCTAACACACCCCCTCACGTCCAGGATTGAACAGACTGGAACGTGGGAAC AACAACGGGTGGCCCAAATATGGGAGGTCTCCACACAACAAATGGATCTAGGATAGGCTCTGATACCATATTAGAAATTG GGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACAACCCTTATAAACACTTGATTGGCCTTATC TCTAGCCAATGTGGGACTTCTAACAATACTTTATTCGGGCAAGGTCAATCAAATATGAACCTTCCTCCTACATTTCTTGA AAGTCTTCCGGATTGTTTACAAATTCTTTGTTGGGAGGGATTTCCTCTAAGATCTTTGCTGCTGAGCTCTCGTCGAAAAA ATCTTCCGGATTGTTTACAAATTCTTTGTTGGGAGGGATTTCCTCTAAGATCTTTGCTGCTGAGCTCTCGTCGAAAAAAT CTTGTTAAACTTTACATGCGCAATAGCCATCTTGAACAACTTTCGGAGGATGACCTGGTACGTCAATCTTAATTCCTTTG TATTTTATTTATGAATTATGAATAGTGTTCGATTTTCAATTTTATCAGTATAGAATTGAATGCTCTTCCTGCTTTATATA TGTATAATAATATATAGCACTTTTGTTCATTATGCCATGTATATAGGATTAAGTTTACGTACTTTCTTGTCACCTAATTA TTTACTTTTGCATCAGGAATTACCTAATTTGAAAAGACTCGATCTCAGTTTTTCTTCGAATCTGATTCAAATACCAGACC TTTTTAAGTTTCCAAATATTGAGGAAATAATTCTCGATTGTTGTAGAAGCTTGATTCAAGTTCACTCCTCCGGTTTCCTC AACGAGCTCAAACTTTTATGGTTAAATAGTTGTGTTGAGCTTACGAGTTTGAATATTCGTAGCAATATTCTATCAAGATC TTTTGGATTAGTGGGGCTCTATAATTGTTGGCGACTCAACGAGTTTTCAATATGTGGAACTAGGGCGGTTGGTGAATTCT CAGGAGCCAAAGAAATTTACGATGATGCACGATGTCTGGATGTAGAATATTCAAATGATCTTGGAAAATTAAGAGGAATT ACACCGTCGGGATTTATCCATGAGCTCTGTTGGTTAGACCTCAGTGATTGTTCATACCTTAAAAGTCTTCCAGCTGACGT TTGTAAGTTGATATTGCTAAGAAGACTTTATCTAGATTGTTGCCTAGATTTGGTAAATTTCCCTGAAATAGAAGAGCCAA TGGAAAACTTAGCGGTGCTTTCTTTGGTGCGAACATCAATACAAAAACTACCTTCATCCTTGCACCGTTTGGTCGGGCTT GAAGAATTGAACTTGTTCAATTGCCATAGGTTGAAGATGATTCCGTCTTCCATTGGAACACTCACCAAACTTTGCAAGTT AGATCTTCGCTACTGTGAATCACTTAAAACTTTTCCCAGCAGCATTTTCAAATTGAAGTTGACAGGACTTGATTTAACTG GTTGCTCAAAGCTAAAGACCTTCCCAGAGATCTTGGAGCCTGCAGAAAGTTTTACTCACATTGGGTTAATAGGTACAAAA ATTAAAGAACTCCCTTCATCATTGGACCGCTTGGTGGGTCTTCAAACCTTGCGTATAGCGTCTCATGATCTAGAGTCACT TCCAAACACCATTGGCAATCTAAACCTTCTCTCTTGCCTTTACATTGAATCCTGTGATAAATTAACAGAAATCCCAAATG ACATAGTTCGCTTGTCATCATCATTAACGAAATTATCACTGAGAAATATCGGAATTGTTAGCCTTCCGGAGAGTATTGCT CATCTTTCACGCTTGGAATCACTTGATGTAAGTCGATGCAAAAAGCTTGAATGTATCCCGGCACTTCCACCATCTATGAA AAAGTTATTGGCATTTAATTGCCCATCCATTACAAGAGTGGTGCCAAACCCGTCGGATTCCAAAGAGGGTACCTTCATAT TTAATTTAACCAGTAGTGGTGAACACAATCCAAGTGCTCATTGTAATATTGTGGAAGATGCCAGGCGTAGGATCATTGAG GGTGCATATAGGTCTGTGTACTATTGCTTTCCAGGGAGTGCAGTTCCCCATTGGTTCCCTTATCATTGTGAGGGGAATTC ATTGACTTTGGATAAAGATTCTCTAAATATGTGGCATGATAACAGGGTCTCTGGTTTGGCTGTGTGTGTCGTTTTGCAAA ATCCATTTTGTGATTATCTTAGATTCAGCTTAACATATGAATCTGATGGCCGCACACACGAACTTCGTTGCGATGATGAT CAGCTGGAAAAATCTTTGAACAAGAGTTTGTTTCAAATGGAAGATGACATGGGATTTCACACATTCCTATGGAAATATGA CTTAATGGACTCTGCAAACATCGACAAAGGGACCTTTCATGCCCTCAAATTCACATTTGAGACCAGCACTCTCACTTGGT TAAATATTGCCACCGTGAAAAGGTGCGGAATATGCCCTCTTTATACCAAAGAAAAAAAAAGGAAATTGAATGATGGCCTA GTTGACTGACTCTTTTAGCCTTGTTCGAGTTTCAAATAATGACTTCGAAGAAGAACGTAGTCGGAAGAAACATGCTGTCA AATGGTTTGGGTATGTTGTGCTAACAAGCTAAATAACTTTCCTTTTTACTTTTTTTTTCTCTATTAACCTTAATTGATAG GTGATTTATTTTTATTGCAGGCATTTCAAGTTGAGCAAGAGTCGTCACTTAACCTGCTCATATTTATGAGTCCATGATTT AGGTATGTCGTGTTAATTGTGGATTTCAATTAATTTGAAATTCGTTTTAAAGTATCAGAAGAACTCCTTTTAATCTTTTC TTCCTTAACATGTTTATTATCAATTGGAGGTACTCGATATGTGAAATTAGTTGAAAAGTTACCAAATGTAAATGCTATTA TTTTATTTTCATCTGTGCTATATGCCACAATCAATTCTAGTACTAAAGGCGATAAATCACATGTGTCCTCTGCTATTTTT TATTTTTCCTAATATTCAATCTGTTCTACCTGTTTGACTTAGCATGTAATTATGCTTATTAAAGATAGGATGCGAAATAA TAATGGAAAGGATGGTTTACTCGTGTGACTCTTCCGCAATTCAAACACCAGACAATTAGTTTCAAGACATGAAAAAACAT AACTAGTTAGAGATTTTTATGGAATGTTTTGTCAAAACTTGATCTGTTTTAAGTCAGCTTCAATTTCTTTGTATTCTTCC CATTTTTGCTCCTTCAAATTGTTAGCATTGTGCAGGGTGTTGCCAAATACAGCTGCTCACATGGCATGAGAGGCAGTATA AATTCTTCAGGATCTCCATTTGAAATGGTAAGTCAATAATCATGTTGATAGTCTTCTGAATCCTGTCAAGCCTAATATTC CCAGCTTTAATTTTATGACAAGGTTTTGACAGTTATAAATGAATCTCATATCATTGAATTAGATTTGTCAATGTATTTGT AGAACTGACAATTTTTTTTGCTTGTTTAACCTGTAATAGATAATTACAAAATGTTGTTCTTCATCATCTTGGTTTTGGTA AGTGGTGCTTTCAAGCCATGCGAATTCACTTTTACTTTGTGTTTTACTTTATGTGTTACCATTAATAGGTGATTATTTTT ATTGCTGCAGGTATCTATTTCAAAATCATTTGGATATGGTGGACACTCCCACAACTCTGGTCTCAATTTCTGCACTCAGG CGCTGCTTGGCGAGCTTGTTCCCACTTTATGTTGAGCACGAGTCATCACTAAGCCTACTCATATTATTTGAGTCCATGAT TCGTAAATGTTGTAGGCATGTACATGTAGAGTTAATTGTGGTTTGACAGCTATTTTGATATCCATTTTAAGTTTTTAATG TACAACTTTTTGAGTAATTTCTATAAAACAACAGTGGAAAAGCTTAATTTAGCGTTAAAATCAAGATCGAATAGTTTCTA TGTAACTACTTACAAGCTAAAATCTTATCATTTTTACTTTTTCTTTATAAAATATTAGGATTATACAAAAGTGGGGAGTC CTTATTCTTGTTATGCACTCACAAGTTTTGTTCTTTGTCAGCAGTTTGTGAAGATGTACACATCAAGGAAGAAAATCTAC AAGGGTAAGGATGCTGATCCTACTGAGTTTGAAGAGTCAGTCGGGCAGGTGTTGTTTGAATGTTGTTGTGGATGCAGTTG CTGGTTGAGTGGTTGCACTTTTTGCCAATGTGTAAATGTTTTTTATTGACTTTTGTTGTTGCAGATTACAGGGATTTTAT GATCTGGAAAATAACTTTCAGGAGCTTAAAAGTGATTTGAAGGATCTATACATCAATTCAGCAGTGTAAGGATGAGTATT ACATGCTTCTGTGTGTGTGTGAAGGGTCATGAGTTTTCTGTATGTATTGTGACCTGTGTTTTTACTGATTCGCTGACAAA CTGTTGTTATTCATGTCCCTTACAGGTTGAGAAAATCTTTCAGTAAGACTTGTCCAAGAAGAAGTTTAGTGGCAAGGTAA ATTTAGTTTAAGTTATTTCTGTTTTGTAGACTAAGTAGTTAATTTGTTTTCATTGACATTTTTTTGTTAGTTTGAATTCA TTTCAGAAGAGTGCTAACAACTCACTCTTTTAGAGACACATTTATTTTTTGAAAAGTCAACACATTTCTACCTCTTCTTA AAAAATGTATTGACTTTTTAAGAAATGAACTGAACACAGGGAGTGTGTCATTAAAAGAATGTGCTACTAGTTACTCCTCT GTCCTGAGGAATTTCTTTGTGACCCTTCTGAACCCGCTCTTACTAAGTATTTCCCCCTCAGTAAGAAGACTTGTTGAACA ATCTCATCTTGATTATTCCTTACTTTTGAGTTGCTTTCTTTTTTTCATTCTGTCATTGACCTGTTTAAATCATATTAAAC CTGTAGGGTGTAATTTTGATTGCCACCCGGAGGATATTGAGGCCACCAATGAAGGGTTTTGTTGTTCAACGTCCCCGCAC GCGAACCCTTACGGTTACAGCTGTTCATGAAGCAATGCTGGAGGATGTCATGTTGCCTGCTGAGATTGTTGGGAAGCGTG TTAGGTACCGAGTTGATGGATCCAAGATTATGAATGTAGAGCTGTTGCTTCCTATTAACTTCTAAAGCTTTCTTATAAGA TAAAACGCCTCTTTACCATGCCAATGTATGTATTGGAAATGAATTCCCTTGGTAAAACGTGTGTGGAAGTTGTTGTCATT TTTGCCGCTGAAGCTTGCAAAATGATTACCTTTGCACAAGTTTTTATTCATTCATTCTGAATTGTATTTTTGTACTTCTG TCGATAGATTTTCTTGGACCCAAAGAAACGAAACAGCACCAAATACAAAGTTGGAGACTTTTGCCGCAGTGTACAGGAAG CTATCCAGCAAAGATGTTGTGTTTGAGTTTGAGTATCCTATCACAGATGCTTAGTTCCATTTCCATTGCCAGCTTTCAAT TTGTTCTAGAGTTTGCATATTGTGTATGCTGGTTAAAATTGTGTTCGATTTCTTTCATGCTGGTTTTTTTATCCTGATTT CTTAAAGTACAAGGGACTGGTTTTATCAATGTAGGATGAGTTTTAATTTTCTTATAAATTTCAGGTTCTTTTCGCA
CDS sequence (LotjaGi1g1v0593000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGGAATAGGTAAAACTACACTTGCTCGAGCACTACATAACAAACTGGCTTCCAAGTTCAGTTCCAGCTGCTGTGT TTTACATGCCCATAAAGAAATAGAAAGAGTTGGAATAGACTCTCTACAAGCAAAAATCTTTTCCGAACTTCTAGACAACG AAGCTATCCCTTCCAATGGATTGGATTATGCAATTGAAAGGATCAAACGAGCAAGGGTTCTCCTTATTCTTGATGATCTC AAAGATTCAAATCAACTTAAAGAATTAGTTGGTGGACATGACAACTTCGGCCAGGGAAGTAGAATCGTTATCACTAGCAG AGACAAGCAGGCGCTTCAGAAAGCTGAAGAAGATAAAATATATCAAGTCACAAAGATGAGTGATGAAGACTCCCTACAAC TCTTCAATTTAAATGCCTTTAAACAGAACCCTTCTGTAAAAACTTATAAGACCTTGGTAGAAAGGGTATTAGAATATGCT CAAGGGGTTCCATTAGTTCTCAATGTTTTGGGCAGGTTGCTTTGTGGTAAATCAATCAAAGTATGGGAAAGTATGCTAAA AAAGCTGCAAAAGTTTCCCCATCATGAGGTTTTCAATGTGTTGAAATTAAGTTATGATGGGCTGGATGATGAAGAGAAGG ACATATTTCTTGAGATTGTTTGCTTCTATGTAGGCGAACTTGAGGACATAGCACTGGATTTACTAGATGGTTGTGGTTTT TCTGCTCACATTGGAATGGATGTTCTTAAAGATAGGGGACTTATATCTATTTCGCACCATCAAATCGTGATGCATGATCT AATACTGGAAATGGGCCTACAAATTGTTAGTCAACAACACGTCAACAACAATCCTAGAAAACATGTTGGTTTATGCAAGT ATGAAGAAATTTATAACAAGCAGGGGACGGATGCAATCAATTTCCTCGGCGTGTGCAAAATAGAAGAAGATGAACTTGAT CCTGAAACTTTCAAAAACATGCATAGTCTGAGAATACTCTATTTCTATAAGTATATGTTAGAAGTCCCATATTGGCTAGA GATAAGGCCAATCAAGTGTTTATAA
Protein sequence (LotjaGi1g1v0593000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGIGKTTLARALHNKLASKFSSSCCVLHAHKEIERVGIDSLQAKIFSELLDNEAIPSNGLDYAIERIKRARVLLILDDL KDSNQLKELVGGHDNFGQGSRIVITSRDKQALQKAEEDKIYQVTKMSDEDSLQLFNLNAFKQNPSVKTYKTLVERVLEYA QGVPLVLNVLGRLLCGKSIKVWESMLKKLQKFPHHEVFNVLKLSYDGLDDEEKDIFLEIVCFYVGELEDIALDLLDGCGF SAHIGMDVLKDRGLISISHHQIVMHDLILEMGLQIVSQQHVNNNPRKHVGLCKYEEIYNKQGTDAINFLGVCKIEEDELD PETFKNMHSLRILYFYKYMLEVPYWLEIRPIKCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 341 | 341 | 9.0E-84 | – | |
| Gene3D | 1 | 123 | 123 | 7.3E-21 | – | |
| PANTHER | 1 | 341 | 341 | 9.0E-84 | – | |
| Pfam | 1 | 200 | 200 | 1.4E-23 | ||
| SUPERFAMILY | 1 | 217 | 217 | 6.41E-49 | ||
| PRINTS | 67 | 81 | 15 | 6.6E-6 | – | |
| Gene3D | 125 | 209 | 85 | 4.6E-6 | – | |
| PRINTS | 160 | 174 | 15 | 6.6E-6 | – | |
| SUPERFAMILY | 196 | 279 | 84 | 8.98E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0593000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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