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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0603300 |
| Transcript ID | LotjaGi1g1v0603300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine-rich repeat secretory protein; TAIR: AT3G60720.3 plasmodesmata-located protein 8; Swiss-Prot: sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15; TrEMBL-Plants: tr|A0A151R5S3|A0A151R5S3_CAJCA Cysteine-rich repeat secretory protein 15; Found in the gene: LotjaGi1g1v0603300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114826659..114831005) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGTCTTTTATTTTACCATAGAAAAACACTTAGCTCAGCAAGCACAAAACACTAGCCACTCACTTTCTTATTGTCAT AAACCAAGACACAAAAACAAACAAAGGTTCGAATTGGTGGGAAAACAAGCAAAAGGAAAAAAATGTTGTCAAGTCTTCAA CTAGACTCCACTGACAGAATCATCCTCTCTTTGAGACTTACTTCTCTGCTAATAATTTTCCTCTCCTCTTCACCTCTTCA TGCTCATGGCAACCCTTCAAGAACCCACATCTTCATCTACGCAGGCTGCTCTCAAGAAAAGTACCAACCAAGTTCACCCT TTGAAGCCAACCTCAACACCTTCCTCTCCTCAGTAGTGAGCTCATCATCTGAAATCACTTACAATACCTTCGCCGTCGGA AATGGAACCGGTTCAACACCGCCAGAAGGAACAGTTTATGGCTTATACCAGTGCAGAGGTGACTTGCACCCAATTGACTG CTCAAAGTGTGTTGGAAGATCAGTTAACCAAATCAACTTAGTTTGTCCCTATGCACTTGGTGCTTCTCTTCAGCTTGAAG GCTGTTTACTAAGATATGAGCACAGTGGTGATTTCCTTGGGAAATTGGACACTGGCATTAAGTTCAGGAAGTGTAGTAAG TCTGTGACTAGTGATGTTGAGTTCTTCCGGCGACGTGATGATGTTCTTGCAGACTTGCAAACGGCGAGTGGATTTAGAGT TAGTAGTTCAGGGCTTGTTCAAGGGTATGCACAGTGTTTGGGTGATTTAACTGTTTCAGATTGTTCATCTTGTTTGGTCG ATGCTGTGGGGAAGCTGAAGAGCTTGTGTGGTTCAGCTGCTGCTGCTGATGTGTTCTTGGGACAGTGTTATGCGAGGTAC TGGGCTTCTGGATACTATGATGAACTAGGTATGTATTTTCATATACTTAACTCTACGCAAAAACTAGCTCAGGGATAATT TTAATATACCATTCTAAGAACTATTTTGATCATATATCTAGTTAACGTACATAAGACTTCTAACATATTCAAATAAAATA TTCTAAGCATGATATCTTTTATACTATTAAATGTTCCCACTAATTAAGTAGTTTATTTCTATCAAATTTTCATTAGAAAA TGTCTATAGAGATAAGCATACAAAAAGGAAACTTTGAGTAGAATTAAAAAGGCTAAAAAGGACTTTTGGTCCCTGATGTT TCAAGTTTGTGCAAATTTTTTCCTTACTCTATTTTTGTCGATGTTTCTACCCCTCATGTTTTCAAATAGTGCACTGTCTA CCCCTCCGTCAGTCAGACGTTAAAAAACTAACGGAATTAGCTGATTTGGCTTTTTCTAAATATTTTTTGGACCTACCACG TAGAAATTATAAGTGAAATTGGAAACAAGGGGCCTGTAAGTAGAAAAATATGCATTTAACCAGTTCAGTTACATACATAA TTGATATATACATCAAACAAATTTAATTTATATCATTTCCTTGATCATCATCAACTTCATATACTCCTCTTCATCTCTCC AATCCACTCAGGAACCTCTCCTGATAAAGCATGACTGACGGAGGGGTAGACGGTGCACTGTTTGAAAACATGAGGGGTAG AAACGTCGACAAAAATATAGTAGGGGCAGAATTTGTACAAACTTGAAACATCAGGGGCCAAAAATGCTTTTTAGCCAATT AAAAACCAACGGAATTCTTAAGAGAGAAGAGCATAAAAAGCAGGACAAGGTGAACTTTTTTGGATATGGTTCTAATTACT TACAGTTATGCATTAATGATCCACTTGTAGAAAAGTGATCTGAGAAAACTGAGGTAAAAAGGAAGCTGAATACCCAAAAT ATTGCACTGGTCAATAATAGTTTATGAAGCAAAGCATTCAGAACATATGCTTTTAAACTTTATCTGGGAAAATGCACACT TTGTGCCATTCCTCTTTATTCTTTTGTTTGAATACCCGATATTTAGTATCTCATTCTATGCTCTTCACCTATCAGAGTCC ATCTGTTTCGTTCCGATCCAGTAGTGTCTTATTTATTTGCATAAAGCAAAAATTTCCATTGGAAAGAAGATAACATGGAG TCTGAGAAAAACCATCTTTTAACCCACAACAATACAAAAGTTATATATTCTCTCCTAAATTTATAAACTAATGCTTCTAC ATATATAACTCATGATTGGTTCAAGTGGTACACCCTTAATTCCCTCCAAGCAATGTAGCAGGTTCAACTATTGTGTAACG AAAATACTCAGATGGCTGGCAAAGTTAGGCTCACATAAACATGAATGTTTAGGACTTGAATAAGATTATCTCTCATGCGC ATGTGTTAGGTAAAAAAAACTAATGATTATATATGTATAACCTCAATTTGGCATAGAAAAATGCTATAAGCACTCACTCA AACACTTTTTTTTCAACACTCTGTTTTATTGATTAAAATTCATTAAGTTTAGAGTACATATAAGATTGTCTCTCATGCAT TAAGAAAACTAATGATTTTATATGTAGAACCTCGATTTTGTATTGAGAAATACTAGCAGCATTCACATTGATATTTTTTT CCAATATTTATCTTTTATTGATTAAAATTTATGTAAATTCTAATTGATAGAGAAACTCATATAATTTAATAACTCGTATA TAAATTCAACTAATACAACAGAGTGCAAGTGAGTGTTATAATATTTTTCTTATGTATTTAATTTGGAAGTGTATCTTGCC ACATATCATGCATAACAGAGTGCCAGTTGTTGTTATTGCTTTTCTCCAACATGGTATTTTTGTGCAGATTCCTCCAACAA TGATGATGTGGGGAAATCGGTTGCTATTATTGTGGGAGTATTTGGAGGTCTAGCCATTCTAGTTGTTCTTCTCTCAATTT GCAAAAAAGCAGCGGGTAATTATTTTTCCAAAATTGTGATCCTTATAATATAATGAAATGGATATCATTGGGGAAATGAT GTGATAATGATCAATGATTTCTTTATTTCATGCAGGTAAGTAGAGGTGTTGAAAGAGGGGGGGGGGGGGGGGGGGATCAC AATCATTACGAGAGTTTTCAATTGTTTGTTTACATTTATTTTAAAAGCCTTGCTTCCACTTTTTGGTCAATTTAATACAG TAAGTTGCTCAACAAAACAGCGTGGGTATCATCTTTTGGTTTTTAAAGTAGAACTCTAATATCCATCAACATAGAAAGTG CTGCAGATTGTCTTGCCTTGGTGATGCCCACCAAAAACTCACCATTAATTCTTTTCATTATTTTAAAACAATTTCTAGAC TATTCTTATGTGCACTTCTCTCTTAAATTAATCACTATTTTCTGAATGCCCATTTTGAGGATCTATTCTTGATTACTCCT AGAGTTTTAACTTGACTAATGAGTCCCATGCACTGAGAGGTTCCTCGTTAAATCCCATTTTCATGTGTAGCAAACAGAAG CTAAATTTCGCTTGGTTAATTTTTTGGAGGTTAATTATTAATTAACAAATTCATCTATAGTGTTGGATTGATAGAGTGAA AGCCTAAAATGTTGTTGAATCAACAGAAGTGTTTGGGCTTTAGTTGTGGACGTAAACTAGTCCAAAAACTTTAAAGAAAT TGGGCTTCAAACACTTTTTTATTTTGAAATTAACATTATATTCTCACTTATAATCCTTTGACCAAAAAGAAAACAATTGT TTTCTTCTTCATCTCTCTTCTCTTCTGAGATTTTTTTTTCTTTCAACATATAATCCAATATGATTTAGATAGAACTTTCT AGACAATTATTTACTTGAGAAATATAAAAAATTATCCAAACAAGCAATTTTAAGACTTGGGTAAATGTCTTCTTGGGCTC TTTAGTTTATTGGTTTAAAAACTCTAGTGTCTTAATTATGTGTTTTTGAAGAGGTAAAAACCAATTTTTTTGTCATGTGA ACTGAATTTTGTCTTTTGGTGTTAGAATGTATTCCAGCAAAGCAAGTACAAGTGGTCTTGCAGCAGGGGTTTTGGTTCGC GTCCTCTTGTACCTCCTAGCCTCTTGGCGGGATCACAAGATGTTGTGATGGGAGGCTCTTTGAGCATATTTTTTCTTCTC TTGGTTAGTTTCTGACTTTTGGGGGTTTGGGGGATGTTGATGTTAGGTGTAAGAGAAGAGTTCTGATGTTAGATCCCTTA CACTATACTCACAAATCACTCACCAACACAGCCCTCACATTAAAAGTGAAATCAAACACACAAATCTTCTAAATAAAAGT GACTCATATATCCTTTATGGGGTTGTCTAAATGACCCTTGATTAAAAATGGGTTAAATCACCCTTTGATAAGGTGTTCCA ATGATATTGTAACATGTGTTTTTACAA
CDS sequence (LotjaGi1g1v0603300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTCAAGTCTTCAACTAGACTCCACTGACAGAATCATCCTCTCTTTGAGACTTACTTCTCTGCTAATAATTTTCCT CTCCTCTTCACCTCTTCATGCTCATGGCAACCCTTCAAGAACCCACATCTTCATCTACGCAGGCTGCTCTCAAGAAAAGT ACCAACCAAGTTCACCCTTTGAAGCCAACCTCAACACCTTCCTCTCCTCAGTAGTGAGCTCATCATCTGAAATCACTTAC AATACCTTCGCCGTCGGAAATGGAACCGGTTCAACACCGCCAGAAGGAACAGTTTATGGCTTATACCAGTGCAGAGGTGA CTTGCACCCAATTGACTGCTCAAAGTGTGTTGGAAGATCAGTTAACCAAATCAACTTAGTTTGTCCCTATGCACTTGGTG CTTCTCTTCAGCTTGAAGGCTGTTTACTAAGATATGAGCACAGTGGTGATTTCCTTGGGAAATTGGACACTGGCATTAAG TTCAGGAAGTGTAGTAAGTCTGTGACTAGTGATGTTGAGTTCTTCCGGCGACGTGATGATGTTCTTGCAGACTTGCAAAC GGCGAGTGGATTTAGAGTTAGTAGTTCAGGGCTTGTTCAAGGGTATGCACAGTGTTTGGGTGATTTAACTGTTTCAGATT GTTCATCTTGTTTGGTCGATGCTGTGGGGAAGCTGAAGAGCTTGTGTGGTTCAGCTGCTGCTGCTGATGTGTTCTTGGGA CAGTGTTATGCGAGGTACTGGGCTTCTGGATACTATGATGAACTAGATTCCTCCAACAATGATGATGTGGGGAAATCGGT TGCTATTATTGTGGGAGTATTTGGAGGTCTAGCCATTCTAGTTGTTCTTCTCTCAATTTGCAAAAAAGCAGCGGGTAAGT AG
Protein sequence (LotjaGi1g1v0603300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSSLQLDSTDRIILSLRLTSLLIIFLSSSPLHAHGNPSRTHIFIYAGCSQEKYQPSSPFEANLNTFLSSVVSSSSEITY NTFAVGNGTGSTPPEGTVYGLYQCRGDLHPIDCSKCVGRSVNQINLVCPYALGASLQLEGCLLRYEHSGDFLGKLDTGIK FRKCSKSVTSDVEFFRRRDDVLADLQTASGFRVSSSGLVQGYAQCLGDLTVSDCSSCLVDAVGKLKSLCGSAAAADVFLG QCYARYWASGYYDELDSSNNDDVGKSVAIIVGVFGGLAILVVLLSICKKAAGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 34 | 34 | - | – | |
| Phobius | 19 | 27 | 9 | - | – | |
| PANTHER | 20 | 290 | 271 | 2.2E-123 | – | |
| PANTHER | 20 | 290 | 271 | 2.2E-123 | – | |
| Phobius | 28 | 34 | 7 | - | – | |
| Phobius | 35 | 266 | 232 | - | – | |
| Gene3D | 41 | 149 | 109 | 1.2E-27 | ||
| ProSiteProfiles | 42 | 150 | 109 | 18.055 | ||
| Pfam | 49 | 147 | 99 | 4.6E-20 | ||
| ProSiteProfiles | 152 | 251 | 100 | 12.66 | ||
| Gene3D | 157 | 251 | 95 | 1.9E-14 | ||
| Pfam | 164 | 246 | 83 | 4.3E-10 | ||
| Phobius | 267 | 287 | 21 | - | – | |
| TMHMM | 267 | 286 | 20 | - | – | |
| Phobius | 288 | 293 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0603300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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