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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0610600 |
| Transcript ID | LotjaGi1g1v0610600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Deoxyhypusine synthase; TAIR: AT5G05920.1 deoxyhypusine synthase; Swiss-Prot: sp|Q9FI94|DHYS_ARATH Deoxyhypusine synthase; TrEMBL-Plants: tr|C6ZS19|C6ZS19_SOYBN Dhs1; Found in the gene: LotjaGi1g1v0610600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:115479574..115488010) extracted from Lotus japonicus Gifu genome v1.2.
ACTTCCCAAAAAATTCTCAACGTTTTCTACGCCGTTTTGGAGAGTACAAATACTCCAAACCAGTACTCACGAATTTCGCA TATGGTAACAATGGCCGAGACAACGAAGCAAGATGATGATAACACAGTCATGGCATCAGTTCACGCCACCGTTTTCAAGG AATCAGAAACCCTTGATGGAAAGTTTCTCCAGATTGAGGGCTATGATTTCAACCAAGGTGTCAATTACCCTCAGCTTCTG AAGTCCATGGTCACCACTGGCTTTCAAGCTTCGAATCTCGGCGATGCCATCGAAGTTGTTAATCAAATGCGAGCTTGGAG GCTTGCTGATGAACCTGTATCAGAGGATTGCACTGATGATAATGAGAAAGATTTGGATTACCGAAAATCTGTCACTTGTA AAGTGTTTTTGGGTTTCACTTCGAATCTTATCTCCTCTGGTGTTAGAGATACTGTTCGCTATCTTGTTCAGCATTACATG GTGAGTAGTTTCCTCTAAAACCCTAATACCAATTTGCGAATGCTTTCTTGCGTTTGTTCTGCAGGTTGAAGGAAGCACAC AATATTATTAACATTTTGAAAAGAGAATATCATTGATTTCATTTTAAAAAGGAAGCACACAATATTGTAGTTATGTCATT GATTTCTTGCTTTTGTTCTGCAGGTTGATGTGGTTGTTACAACTGGCGGTGGCATTGCAGACGATCTTATAAAGTGCCTT GCACCGACATGCAAATTCGAGGACTGGATTATTCCTATTTTTGATCAAATGTTGATAGAACAAAATAGTGAGGTGTTCTA TTTTACACTTCTCTATTCAGTGCATTATAAAACTGATATGGTTCACAATTTGTGGATTCCTGGAATGACATTCATCGGCA GTGCTAAATTTTATAGAATACATAATCTGCTGGAAAAATATTTTGTTTTTCTTTCGGATTTCCTTTTTCAATGCTCTGTT TCTGTGAACGATTTATTTGTGTACCATAGAATGACAAACCTTCTATGCAGGAGGTTTGTTCTCAGTTGTCACTAGTAACT TTTTCCTTGACCCTTCATCATCTTATTTTATGGCAGAATGTGACATGGACACCCTCCAAGTTAATAGCGCGATTGGGAAA GGAGATAAAAAATGAAAGCTCTTATCTTTACTGGGCATACAAGGCAAGAATGAGACCTAGCTTAGATTTTCAGTAAATCA AGATATTCTGTCTACTTCGCTTATTTAGTCTCTTTTTTCATCATTAAACTGTTGAATGTCTACATTTCCCGTGGTGTGTA TATACGGAATGCAGCCTAGTTATTTGTGCTGATTTTCTGAATAATTTGGATATTTGAAGGAAGCACACAGTATTATTAAC ATTTTGTTTGATATTTTCCAGAACAACATTCCAGTTTTCTGTCCAGGCTTAACTGATGGCTCATTGGGGGACATGCTGTA CTTCCATTCCTTCCGCAGCCCTGGTCTGATTGTAGACATAGTGCAAGGTTTCTTCTTCTTTCTTTCTACTTTTTATTGTG TGTATGATTTAAAACAGCTTGGAAACCTTGCTAAAATAATAGGCAATGCAACAGATATAAGGGCCATGAATGGTGAAGCT GTACATGCAAATCCTAGGAAGACAGGCATGATTATTTTAGGAGGTGGGCTTCCAAAACATCATATTTGCAATGCCAACAT GATGCGGAATGGTGCTGACTATGCAGTTTTTATTAATACTGCACAAGAATTTGATGGGAGTGATTCTGGAGCTCGTCCAG ACGAGGCTGTTTCTTGGGGGAAAATACGAGGATCTGCTAAGACTGTAAAGGTACATCCCATGCATACTTTCTCACAACTG ATTTTCTTCTTTCCCGAATTATGTAATACCTTTGCCACAAATTCTTTTGCTTAAGGATCAATAGTTTTTACATTATGTAG CCATGCATATCAGTAACATCTTTATTTATTGGTATACCTGTAAACGCGAAAGGTTCATCTGTTTTTCAATTTTGCAATGC CAGCATGACTTATTGAGAGAATGAGAGATGAATTAGAGATATGAGAATAAGTGATCTCTTCTGTTGATCAGTGTGGTTCA TATACAACATGAGTACATGCTGGATACTGAAAGCTGAATCTAACAAATTGAATAGTTACAACTACAATAACTGGGATAGA AAGTAATTAACTAATAGTACCTGACTTATAATTTATCAGGTAATACTCCACCCTCAAGATGGGGAATAGATGTTCCAAAT GGTAGAAGCAAGGCTTTAGCAAAAGAAGCCAATTTTTCCAAATGGTCTTCAATTACGTGAAGTACTGGCTGACTTCATTT GATCCTCGTGAAAGACTCATGAGTTCCTTGCAGAGCTGGAACACTCGGGGTCCATTCTTTTGTTGAAACATTTCCCCCAG GTCTTGCCCAACTTTGTTCTTCCCTGAGGGAGCTATAGTTGTAGTCCTGCGTGTAATTTGGACCTGGCAAAGGTTGTGAA ACTAGTGCAAGTCCTGGACCATCAGAATGATGAAGATATAAGTGGCTAGAAGTGTCTCCCCTGGAAGAAAGACAGTGCCG AGGAGAAGAGAAAAAAAAAACGGGAATCTTAAAGGAGGATGAAGTTGCAGCAAGGATGTGCAAGTTGAAGAAAGCACAGA AGCGTGACTCGATGCTTTGGTATCATATTGCGAAAATGAGTGATGACTTGAGAGTAATGATAATCAATGATCTCTTTTAT TGACCAGTGTATTAATTCAACATGAATGCAAACTGGATATAGCTGAATACAGAAACTAACTAACAAAGTGAAATAGTTAC AACTATTATATCAACGAATTAACTTGTTAACAAAAAAAAATATCAACGAATTAACTAACAGTAGTTAATAATGTTTTGGG TAATATGACCTTTAGTTGAAATATTGGGAAATGCTCTGGTATCCATCTTTTCAATGTGTAGAATATCTAGGGAGATTTCT TCAATACTCATTACTTGCTGGTTATATTTAATGGACTTCTAAAGATAAAGATTTACTGTAAAACTAGTAACCATTTTTTT TTTTCACAACTCAACTTTGGCACCGAGGTTATAGTACTGGGGTACCACACACCCAGCAATACTGTATCCCAGTTTCCCTG AAAAGTTTTTTTTTTATTCCATTGAACCAGGTACATTGTGATGCAACAATAGCATTCCCTCTGCTGGTTGCTGAAACGTT TGCCTCACAAGAGACTGCTGATGATACTCCAACTGAATTAGAAGAAGGAGATTTGAGTCATGAACAAGAGACTACTGATG ATACTCCAACTGAAAAGGTCTGAGAGGCATAAGTAACTTTGATTACCAACAAGTAAACCAATGGCATATTATAGTAATCT AGTATCATAAATAAATTACACACACATGATGTACTTAACATATTTTTAATGGCATTTCCAGAGAATTCATGTGACTAATT GTGTGCCCATTTCCTTGGAAAGCTCCATCTTAATTCCTACTTTTGTTTCCATTTATTTTGAAATAGATTGTCAAAGCAGC TGATACAAATAAGGATTCTAAATTAGCTCCTGACTCTATTGCTGAAGAGCAAAGTGACAAAAATAACTGTTATGACACAA TGTATAAAGCGGATGGAACTTCTACAGATGATGAAAAAGGTGAGACGACGAAGCAAGATGACAACACAGTCATGGCATCA GTTCACGCCACCGTTTTCAAAGAATCAGAAACCCTCGAAGGAAAGAGCGTCCAGATTGAGGGCTATGATTTCAACCAAGG TGTCAATTACCGTCAGCTTCTGAATTCCATGCTCACCACTGGCTTTCAAGCTTCGAATCTCGGCGAGGCCATCCAAGTTG TGAATCAAATGCTAGATTGGAGGCTTGCTGATGAACCCATATCAGAGAATTGCACTGATGATGACCATGAGAAAGATTTG GATTACCGAAAATCTGTAACTTGTAAAGTGTTTTTGGGTTTCACTTCTAATCTCATCTCCTCTGGTCTTAGAGATACTGT TCGGTATCTTGTTCAGCATCACATGGTGAGTTTCGTCTAAGACCCTAATACCAATTTGCTTCAAAGATTTGATTTTAGTG AAGTATAGCATTGTTTCAGGGAAAGAGGTCAAAATGCATATTCTAGTTGTTTTGTAATTGTGCACAGACTGCTATGTTTT TTACAGGGTATATATTATTGGGAATTGGTTTTAATGCCACCCCTTTTCATTTTCTCGCAACCCAAATCACTTATATGTGT GCAGAAACCAATTACACACAACACTTATAAGTGCGGAACACAAATTACCGCAAATTGAAAGTGCGGAAGAGGATGGTATG AATATCTAAAGGGGTGGAACTAAAACCAATTCTGTATATTATTTCTACTCATTTTTATACAACCCTTTTTTAGAAGTCAT CTTATTTCACATTTCCCTCGTTTCCATCCGAATCTCTCTTTTAGTTGTGGGAAAGTTGTAGGAACCATGTGTAGGAAGAG AAATTCTCTTTTAGATCGAGCTTCCTTTTATGAGATATATGCATTTGAACTGCAATGGCATTCTGAAACAAAGTTGCAAA TGCAAGTTTTTCTCTTAATATTTGATAAATTCATTGTAGTTATGTCATTGATTTCTTGCTTTTGTTCTCCAGGTTGATGC GGTTGTTACAACGGCTGGTGGCATTGAAGAAGATCTTATAAAGTGCCTTGCACCAACATTTAAAGGAGATTTCTCTCTGC TTGGAGCCATTCTTCGTTCAAAAGGATTGAATCGGATTGGTAATTTACTTGTCCCTAATGACAACTACTGCAAATTCGAG GACTGGATTATTCCTATTTTTGATCAAATGTTGATAGAACAAAATAGTGAGGTATTCTATTTTACACTTCTCTATTCAGT GCATTATAAAACTGATATGGTTCAGAATTTGTGGATTCCTGGAATGACATTCATCCGCAGTGCTAAATTTTGTAGAATAC ATTTAATCTGCTTGAAAAATATTTTGTTTTTCTTTCGGTTTTCCTTTTTCAATGCTACTGTTTCTGTGAACGATTTATTT GTGTATCATAGAATGACAAACCTTCTATGCAGGAGGTTTGTTCTCAGTTGTCACTAGTAACTTTTTCCTTGACCCTTCAT CATCTTATTTTATGGCAGAATGTGACATGGACACCCTCCAAGTTAATAGCGCGATTGGGAAAGGAGATAAAAAATGAAAG CTCTTATCTTTACTGGGCATACAAGGCAAGAATGAGACCTAGCTTAGATTTTCAGTAAATCAAGATATTCTGTCTACTTC GCTTATTTAGTCTCTTTTTTCATCATTAAACTGTTGAATGTCTACATTTCCCGTGGTGTGTATATACGGAATGCAGCCTA GTTATTTGTGCTGATTTTCTGAATAATTTGGATATTTGAAGGAAGCACACAGTATTATTAACATTTTGTTTGATATTTTC CAGAACAACATTCCAGTTTTCTGTCCAGGCTTAACTGATGGCTCATTGGGGGACATGCTGTACTTCCATTCCTTCCGCAG CCCTGGTCTGATTGTAGACATAGTGCAAGGTTTTTTCTTCTTTCTTTCTACTTTTTATTGTGTGTATGATTTAAAACAGC TTGGAAACCTTGCTAAAATAATAGGCAATGCAACAGATATTAGGGCCATGAATGGTGAAGCTGTACATGCAAATCCTAGG AAGACAGGCATGATTATTTTAGGAGGTGGGCTTCCAAAACATCATATTTGCAATGCCAACATGATGCGGAATGGTGCTGA CTATGCAGTTTTTATTAATACTGCACAAGAATTTGATGGGAGTGATTCTGGAGCTCGTCCAGATGAGGCTGTTTCTTGGG GGAAAATACGCGGATCTGCTAAGACTGTTAAGGTACATCCCATGTATACTTTCTCACAACTGACTTTCTTCTTTCCCGAA TTATGTAATACCCTTGCCAGAAATGCTTTTGCTTAAGGATCAATAGTTTTTACATTATGTAGTCATGAATATCAGTAACA TCTTCATTTAGTGGTATACCTGTAAACGCGAAAGGTTCATCTGTTTTTCAATTTTGCAATGCCAGCATGACTTATTGAGA GAATGAGAGATGAATTAGAGAAATGAGAATAAGTGATCTCTTCTATTGATCAGTGTGGTTCATGTACAACATGCTGGATA CAGAAGCTGATTCTAACAAATTGAATAGTTACAACTACAATAACTGACATATAGAAACTAATTAACTAATAGTAACTGAC ATATAATTTATCGGGTAATACTCCACCCTCAAGATGGGGAATAGATGTTCCAAATGGTAGAAGCAAGGCTTTAGCAAAAG AAGCCAATTTTTCCAAATGGTCGTCAATTAGGTGAAGTACTGGCTGACTTAATTTGATCCTCGTGAAAGACTCATGAGTT CCTTGCAGTGCTGGAATACTCTGGATCCATTCTTTTGTTTAAACCTTTCCCCCAGGTCTTGCCAAATTTCTACAACATTT TCTGAGTACATACTTCTTGCAATGATCTCCTTGGAGACTACCTTGAAGATCCAAGGTATGGCTATATTATTGCTTGTATT TGAGGATCAGGCCCAACTTTGTTCTTCCCTGAGGGAGCTATAGTTGTAGTCCTGCGTGTAATTCAGACCTGGCAAAGGTT GTGAAACTAGTGCAAGTCCTGGACCATCAGAATGATGAAGATATAAGTGGCTAGAAGTGTCTCCCATGGAAGAAAGACAG TGCCGAGGAGAAGAGAAAAAAAACGGGAATCTTAAAGGAGGATGAAGTTGCAGCAAGGATGTGCAAGTTGAAGAAAGCAC AGAAGCGTGACTCGATGCTTTGGTATCATATTGCGAAAATGAGAGATGACTTGAGAGTAATGATAATCAATGATCTCTTC TATTGACCAGTGTAGTAATTCAATATGAATGCAAACTGGATATAGCTGAATACAGAAACTGAGTCAGAAACTAACTAACA AAGTGAAATAGTTACAACTACAATCAGTACATATCAATGAATTAACTTGTTAACCCAAAAAAAATATGAATGAATTAACT AACACTCTATCAGTAGTTAATAATGTTTTGGGTAATATGACCTTTAGTTGAAATATTGGGAAGTGCTCTGGTATCCATCT TTTCATTGTGTAGAATATCTAGGGCGATTTCTTCAATACTCATTGCTTGCTGGTTATATTTAATGGACTTCTAAAGATAA AGATTTATTGTAAAACTAGTAACCATTTTTTATTTTTTTCACAACTCAACTTTGGCACCGAGGTTATAGTACTGGGGTAC CAAACACCCAGCAATACTGTATCCCTATTTCCCTTAATTTTTTTTTATTCCATTGAACCAGGTACATTGTGATGCAACAA TAGCATTCCCTCTGCTGGTTGCTGAAACGTTTGCCTCAAGAGTGAAACCTCACCATTGATAAATGTAAGTTTACTGTCAA TTTCATTTTAATTTTATTGTGTCAGGATCTTGGACCAGCTCACTACTGAAATTCTTAATTATATCATTGAATGTTGGGAT ACATGAATTATAGATGTCATGATTTTTCTTTGGAGTTGTAGTTTGTCTTAGTCTTGAGGTGAGGATAATTGTAATGTCTA GAACAAATAAGACTAGAAAAATTTATCAAATAACCTAATGTTAGTACTTTTAATATTTTTCCAACTGATAACTGAATTTG ATGTTGGAGAGAAGTTTTAGCAATGTTTTTAAAACCGGACCGTTCGTTTAACCGTTCGAGTTACCGGTTCAAAGTTCATT GGTTTAATCGTGTTTGAACCAGGCTTGTTAATAGCGCGCTATGGCGGTGCAGCGGTTGGCTGTGACGGTGGAGGCTGTAG CGGTGGTAGCACGCACGATTGCGATTAAAATCACGTCTGGTGCAGCCCCATGGATGAAGGGAAAGGTATGACGCGCAGAA TTCCAATTCTGCCCCTTCTTAACACACATTAGGTTAAAAACTGAGGGCTTAGTGAAATTGAATCCTGCCCAAGTGTACCT AGCTTCCTTTTCACACTCTTCGTACAACATCTTGCCATTCACTCTTTCCAAGTTTCAACCTCTAGTTTCTTCTTCCTCTT CACCTTTCTTCTCTTCCACACCTACGCGACTTTTGGCAGATTTTTCAGTAGATTTGCCAGCGGTTGGAGCTTCTTCATCG TCCTAGGCTCCTTCTTCTGCACACCTATGAAAGTGCTGCTGGTTTAGATTATTTTCATGCTTTTTCTATGTTATCCTTCT CATTTTTCTGATTTTCTTTTTTTCTCCTTCTTCTCCACAACTCCTAGCCCTCGCGCCGAGCAAGTGTCATCTCTATGTAT CCCTATTTCTTAAGTATTTATCTGTGAGATTACGAAAAACGCAGATTCATGTAGCTTAATTGATGATGTAAATATACTTT CATGAGTTTATAATTTATATAGTACTTTTAATTCCAC
CDS sequence (LotjaGi1g1v0610600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAACAATGGCCGAGACAACGAAGCAAGATGATGATAACACAGTCATGGCATCAGTTCACGCCACCGTTTTCAAGGA ATCAGAAACCCTTGATGGAAAGTTTCTCCAGATTGAGGGCTATGATTTCAACCAAGGTGTCAATTACCCTCAGCTTCTGA AGTCCATGGTCACCACTGGCTTTCAAGCTTCGAATCTCGGCGATGCCATCGAAGTTGTTAATCAAATGCGAGCTTGGAGG CTTGCTGATGAACCTGTATCAGAGGATTGCACTGATGATAATGAGAAAGATTTGGATTACCGAAAATCTGTCACTTGTAA AGTGTTTTTGGGTTTCACTTCGAATCTTATCTCCTCTGGTGTTAGAGATACTGTTCGCTATCTTGTTCAGCATTACATGG TTGATGTGGTTGTTACAACTGGCGGTGGCATTGCAGACGATCTTATAAAGTGCCTTGCACCGACATGCAAATTCGAGGAC TGGATTATTCCTATTTTTGATCAAATGTTGATAGAACAAAATAGTGAGAATGTGACATGGACACCCTCCAAGTTAATAGC GCGATTGGGAAAGGAGATAAAAAATGAAAGCTCTTATCTTTACTGGGCATACAAGAACAACATTCCAGTTTTCTGTCCAG GCTTAACTGATGGCTCATTGGGGGACATGCTGTACTTCCATTCCTTCCGCAGCCCTGGTCTGATTGTAGACATAGTGCAA GATATTAGGGCCATGAATGGTGAAGCTGTACATGCAAATCCTAGGAAGACAGGCATGATTATTTTAGGAGGTGGGCTTCC AAAACATCATATTTGCAATGCCAACATGATGCGGAATGGTGCTGACTATGCAGTTTTTATTAATACTGCACAAGAATTTG ATGGGAGTGATTCTGGAGCTCGTCCAGATGAGGCTGTTTCTTGGGGGAAAATACGCGGATCTGCTAAGACTGTTAAGGTA CATTGTGATGCAACAATAGCATTCCCTCTGCTGGTTGCTGAAACGTTTGCCTCAAGAGTGAAACCTCACCATTGA
Protein sequence (LotjaGi1g1v0610600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTMAETTKQDDDNTVMASVHATVFKESETLDGKFLQIEGYDFNQGVNYPQLLKSMVTTGFQASNLGDAIEVVNQMRAWR LADEPVSEDCTDDNEKDLDYRKSVTCKVFLGFTSNLISSGVRDTVRYLVQHYMVDVVVTTGGGIADDLIKCLAPTCKFED WIIPIFDQMLIEQNSENVTWTPSKLIARLGKEIKNESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRSPGLIVDIVQ DIRAMNGEAVHANPRKTGMIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARPDEAVSWGKIRGSAKTVKV HCDATIAFPLLVAETFASRVKPHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 155 | 142 | 6.4E-181 | – | |
| PANTHER | 14 | 155 | 142 | 6.4E-181 | ||
| SUPERFAMILY | 19 | 340 | 322 | 2.55E-124 | ||
| Gene3D | 36 | 154 | 119 | 8.6E-43 | ||
| Pfam | 51 | 154 | 104 | 1.5E-27 | ||
| Gene3D | 155 | 344 | 190 | 6.6E-95 | ||
| PANTHER | 156 | 341 | 186 | 6.4E-181 | – | |
| Pfam | 156 | 335 | 180 | 8.4E-80 | ||
| PANTHER | 156 | 341 | 186 | 6.4E-181 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Peptidyl-lysine modification to peptidyl-hypusine | The modification of peptidyl-lysine to form hypusine, peptidyl-N6-(4-amino-2-hydroxybutyl)-L-lysine. |
Expression pattern of LotjaGi1g1v0610600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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