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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0621100 |
| Transcript ID | LotjaGi1g1v0621100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat; TAIR: AT5G14230.1 ankyrin; Swiss-Prot: sp|Q8C8R3|ANK2_MOUSE Ankyrin-2; TrEMBL-Plants: tr|A0A151RJD0|A0A151RJD0_CAJCA Putative ankyrin repeat protein RF-0381; Found in the gene: LotjaGi1g1v0621100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116855343..116858290) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACTCTGATTTGATCCGACCTCATATTGCTGTACATGCTCTTGTCACCGCGTGCTGCAGGGGGCTTGTAGATGTGGT TCAGACTCTCATAAAGGTACATGTTCTGCAGCTGCTTGATTCTGTAGATTCCAATTCATGATGGCATTGGCATCCCTGAA CATAAACTTCCATGATCAGTATAATTTACAATTATCTGGTCGGTATTATATGGCGCATTATGAAGTTGCGTCCTGTGGAC TTAAAACTTTTATTCCTAGTGTAACCTTCTTTTGAACACAAAGGTCATTATTGACTTCACCATGGACTTCTTTGTGAAGT TTGGTTCTTGGTAATTGGTACATTATTTGGATGGTATTTGCTGAAATAATAAAAAATAAAAAATAGATTTTAAATAATGG CCGCAGTCGTGTATCGTGATCTTTGATATTGTGGAAAATCACAGATAAATGCGGTTGATATGGCTATATGCCGTCACGGG GCGTCCAAAACCATAATGTCCCGGCCGCAATTGCATTCTGATCATAAAGTTTTTATAAGCCTTTGTGATGCTTGTTAGCT AAACTTCCTCAAACACTTCACTCGCTTTTCTCTTGTTACAAGAAGAAACCTTTACCACGGACTGTCATCTTTCTAGAGTT CAACTGACTGGTCCTCATGTAATATTCTGAGACTAGTATTTGGCTTACACTCTCTAGGGAGTCAATGAACTATGCTTGTA CTCAGCTTTCTACTGTATTTGTGGTTTATGGAAAATACTTGTTTGAGTATGCTGAACTTGAGATGATATTTTCAATGGCA GTGCGGTGTGGAGGTAAATGCGACAGACCGGGTACTTTTACAGTCACTTAAGCCTTCTCTCTACACAAATGTGGACTGTA ATGCACTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTCGATTTGCTGCTGCAGGTAATCTTTTCCCTTAGCCCC TTCAAACCTTTGATTATCATTACAATTTGGTTTACTGCATGAGAATATTTTACATTGCTGCACATTCCTAGGTTTTGCAG CCAATATTTCCTTACTTTTTGGATTTGCTTTTGTGATCGATTGGTTTGCTGCTTTTTACAGTATATATTTTCATTTTTTC CAAAATAATTTCTTCATGGTATAATGAGTTATTTAAGAAGTCATAAGTTTGTGGCAGAAAAGGCCTCATCTTGTAATGCT GGTAATAATGTTCATCAGCTCAGCAATTTCTTGCAGTTGCACAACAATATAAAAAAATATGATCTTCATGGTTAAATTTT AGCATTTAATCAGCTAATTCTGCCGATAGGGACATAATTGCATTTATCTTTCCATTGTCATTTTAATTTTTAGTGTGAAA TGAGCCTCACTAGAACTTTCTTACAAATGAACTACAGAATGGTGCTCAGCTAGACTTCGAAGTCAGACTTGGAACATGGT TATGGGACACTTCAAATGGTGAAGAGCTTCGTGTTGGTGCTGGACTAGGAGAACCTTATGGCATCACCTGGTGCGCAGTT GAATATTTTGAAAGAAGTGGCGCTATATTACGCATGCTTCTGCAACATGTCTCCGTCAATAATTCTAACCGTGGGAGAAC CCTTCTACACCATGCTATCCTCTGTGGCAATGTTGAGGCTGTCAGGATACTCTTAGAATGTGGTGCTAATGAAGAATCCC CAGTCAGAACAGTCAGCAAGACCGAGTTCCTTCCAATTCACATGGCGTCTCATATTGGCTTACCAACAATTGTTCAATGC CTTATTGATTTTGGTTGTAATTTGAACTCCATAACGGACTCCGGTGACACAGCTTTAATGGTTTGTGCAAAATATAAACA AGAGGAGTGTCTCAAAGTACTAACCAGGGCTGGTGCTGATTTCGGGTTGGTTAATTTGGCTGGTAAATCTGCGAGTTCAA TTGCTGAGTCAAACAAGTGGTCACTTGGTTTTCAGCAAGCGGTGCTGGACACAATCAGGAAAGGCAATATACCCAAATCC AGCAATGCTTCTACCTTTTCTCCTCTATTGTTTGTAGCTCAAGCTGGAGATACCGAGGCATTGTCAACTGTCATTGAATC TGGAAAATTTGATCTTGATCACCAAGATGATAGTGGTTTCTCAGCAGTAATGCATACTGCTTTGAAGGGTCACGTGGAGT CATTTAGATTGCTTGTATTTGCTGGAGCCGATGTAAAGCTGTGCAATAAATCTGGTGAAACAGCAATAACCCTATCTGAA TTAAATCAGAACCGTGACTTATTCGAAAAGGTCATGCTTGAATTCGCGCTTGAAAAGGGCAACCGTAACACTGGTGGCTT CTATGCCTTACATTGTGCAGCTCGTCGTGGTGACTTGGAAGCTGTGACATTGCTCACCAGCAAAGGCTATGATGTGAATG TCCCTGATGGGGAGGACTACACTCCGCTCATGCTAGCAGCAAGGGAAGGCCATGGATCCATTTGTGAGCTTCTAATCTCA CATGGGGCTCATTGCAATGCTAAAAATGCTCGAGGGGAAACTGCACTTTCACTTGCAAGGAAGTTCCGAGGAGGGAAAAA CGATGCAGAGGCTGTTATACTTGATGAACTTGCTCGTAAGTTGGTATTGGGTGGTGCCTGTGTTCAGAAGCATACCAGAG GTGGTAAAGGCTCGCCACATGGGAAACAATTAAGGATGTTGGGCTCTGCAGGTGTGCTGCGTTGGGGAAAGTCAAGGCGG AGAAATGTGATATGCTGTGAGGCAGAGTTAGGGCCAAGCTCAGCATTGGGGAGAAATAGGCGCAAGAAAGGTGATGCAGA TGAACCTGGAGTTTTTAGGGTGCTTACTAACAAGAACAGAGAAGTGCATTTTGTTTGTGAAGGGGGGCTAGAAGTTGCTG AGCTTTGGGTGAGGGGTATTAAGCTTGTAACTAGAGAGGCTATTTTTCATTTGTAGAGATCGATCTAA
CDS sequence (LotjaGi1g1v0621100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTCTGATTTGATCCGACCTCATATTGCTGTACATGCTCTTGTCACCGCGTGCTGCAGGGGGCTTGTAGATGTGGT TCAGACTCTCATAAAGTGCGGTGTGGAGGTAAATGCGACAGACCGGGTACTTTTACAGTCACTTAAGCCTTCTCTCTACA CAAATGTGGACTGTAATGCACTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTCGATTTGCTGCTGCAGAATGGT GCTCAGCTAGACTTCGAAGTCAGACTTGGAACATGGTTATGGGACACTTCAAATGGTGAAGAGCTTCGTGTTGGTGCTGG ACTAGGAGAACCTTATGGCATCACCTGGTGCGCAGTTGAATATTTTGAAAGAAGTGGCGCTATATTACGCATGCTTCTGC AACATGTCTCCGTCAATAATTCTAACCGTGGGAGAACCCTTCTACACCATGCTATCCTCTGTGGCAATGTTGAGGCTGTC AGGATACTCTTAGAATGTGGTGCTAATGAAGAATCCCCAGTCAGAACAGTCAGCAAGACCGAGTTCCTTCCAATTCACAT GGCGTCTCATATTGGCTTACCAACAATTGTTCAATGCCTTATTGATTTTGGTTGTAATTTGAACTCCATAACGGACTCCG GTGACACAGCTTTAATGGTTTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACCAGGGCTGGTGCTGATTTC GGGTTGGTTAATTTGGCTGGTAAATCTGCGAGTTCAATTGCTGAGTCAAACAAGTGGTCACTTGGTTTTCAGCAAGCGGT GCTGGACACAATCAGGAAAGGCAATATACCCAAATCCAGCAATGCTTCTACCTTTTCTCCTCTATTGTTTGTAGCTCAAG CTGGAGATACCGAGGCATTGTCAACTGTCATTGAATCTGGAAAATTTGATCTTGATCACCAAGATGATAGTGGTTTCTCA GCAGTAATGCATACTGCTTTGAAGGGTCACGTGGAGTCATTTAGATTGCTTGTATTTGCTGGAGCCGATGTAAAGCTGTG CAATAAATCTGGTGAAACAGCAATAACCCTATCTGAATTAAATCAGAACCGTGACTTATTCGAAAAGGTCATGCTTGAAT TCGCGCTTGAAAAGGGCAACCGTAACACTGGTGGCTTCTATGCCTTACATTGTGCAGCTCGTCGTGGTGACTTGGAAGCT GTGACATTGCTCACCAGCAAAGGCTATGATGTGAATGTCCCTGATGGGGAGGACTACACTCCGCTCATGCTAGCAGCAAG GGAAGGCCATGGATCCATTTGTGAGCTTCTAATCTCACATGGGGCTCATTGCAATGCTAAAAATGCTCGAGGGGAAACTG CACTTTCACTTGCAAGGAAGTTCCGAGGAGGGAAAAACGATGCAGAGGCTGTTATACTTGATGAACTTGCTCGTAAGTTG GTATTGGGTGGTGCCTGTGTTCAGAAGCATACCAGAGGTGGTAAAGGCTCGCCACATGGGAAACAATTAAGGATGTTGGG CTCTGCAGGTGTGCTGCGTTGGGGAAAGTCAAGGCGGAGAAATGTGATATGCTGTGAGGCAGAGTTAGGGCCAAGCTCAG CATTGGGGAGAAATAGGCGCAAGAAAGGTGATGCAGATGAACCTGGAGTTTTTAGGGTGCTTACTAACAAGAACAGAGAA GTGCATTTTGTTTGTGAAGGGGGGCTAGAAGTTGCTGAGCTTTGGGTGAGGGGTATTAAGCTTGTAACTAGAGAGGCTAT TTTTCATTTGTAG
Protein sequence (LotjaGi1g1v0621100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSDLIRPHIAVHALVTACCRGLVDVVQTLIKCGVEVNATDRVLLQSLKPSLYTNVDCNALVAAVIHRQVPVVDLLLQNG AQLDFEVRLGTWLWDTSNGEELRVGAGLGEPYGITWCAVEYFERSGAILRMLLQHVSVNNSNRGRTLLHHAILCGNVEAV RILLECGANEESPVRTVSKTEFLPIHMASHIGLPTIVQCLIDFGCNLNSITDSGDTALMVCAKYKQEECLKVLTRAGADF GLVNLAGKSASSIAESNKWSLGFQQAVLDTIRKGNIPKSSNASTFSPLLFVAQAGDTEALSTVIESGKFDLDHQDDSGFS AVMHTALKGHVESFRLLVFAGADVKLCNKSGETAITLSELNQNRDLFEKVMLEFALEKGNRNTGGFYALHCAARRGDLEA VTLLTSKGYDVNVPDGEDYTPLMLAAREGHGSICELLISHGAHCNAKNARGETALSLARKFRGGKNDAEAVILDELARKL VLGGACVQKHTRGGKGSPHGKQLRMLGSAGVLRWGKSRRRNVICCEAELGPSSALGRNRRKKGDADEPGVFRVLTNKNRE VHFVCEGGLEVAELWVRGIKLVTREAIFHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 588 | 588 | 8.5E-293 | – | |
| PANTHER | 1 | 588 | 588 | 8.5E-293 | – | |
| ProSiteProfiles | 1 | 19 | 19 | 5.0 | – | |
| SMART | 10 | 39 | 30 | 52.0 | ||
| Gene3D | 10 | 98 | 89 | 5.0E-9 | ||
| SUPERFAMILY | 14 | 85 | 72 | 3.23E-8 | ||
| ProSiteProfiles | 14 | 458 | 445 | 59.74 | ||
| SMART | 56 | 85 | 30 | 29.0 | ||
| Gene3D | 115 | 259 | 145 | 2.2E-26 | ||
| Pfam | 119 | 169 | 51 | 7.2E-7 | ||
| SUPERFAMILY | 140 | 459 | 320 | 3.97E-52 | ||
| SMART | 143 | 172 | 30 | 0.0024 | ||
| ProSiteProfiles | 143 | 169 | 27 | 10.846 | ||
| PRINTS | 144 | 159 | 16 | 7.1E-5 | ||
| SMART | 180 | 209 | 30 | 5.1 | ||
| SMART | 213 | 242 | 30 | 0.015 | ||
| ProSiteProfiles | 213 | 245 | 33 | 8.603 | ||
| Gene3D | 260 | 369 | 110 | 3.9E-15 | ||
| SMART | 283 | 313 | 31 | 1300.0 | ||
| SMART | 317 | 346 | 30 | 3.1 | ||
| ProSiteProfiles | 317 | 349 | 33 | 8.923 | ||
| Gene3D | 370 | 478 | 109 | 4.0E-25 | ||
| Pfam | 374 | 448 | 75 | 6.8E-12 | ||
| ProSiteProfiles | 384 | 416 | 33 | 11.327 | ||
| SMART | 384 | 413 | 30 | 0.0039 | ||
| ProSiteProfiles | 417 | 449 | 33 | 11.861 | ||
| SMART | 417 | 446 | 30 | 3.9E-4 | ||
| PRINTS | 433 | 447 | 15 | 7.1E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0621100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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