Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0623300 |
| Transcript ID | LotjaGi1g1v0623300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G27180.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q6M9M7|Y1998_PARUW Uncharacterized RNA methyltransferase pc1998; TrEMBL-Plants: tr|K7MFD5|K7MFD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0623300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:117062592..117074601) extracted from Lotus japonicus Gifu genome v1.2.
TAACTTCATTCATCCATTCCCGCTTTCCAAATTGCAGATAACGCCGAACCGGAAAATGACCTTCCGTCTAATCTCAGCTC CGCCGTCCTTCCCTCTCTTCACCTGCCACGCCACCTCCACCTCCACCTCCGCCACCACCACCGCCCGCCCCCTCCCTCCG CCTCCTCAAATCTCGCCGGCGACCCTAACTCCTATAACTCCACAGCCCCCGCCGCCAACGTGCGCACTCCACTGCTCCCA CTTCCAATCGTACGCTTCCCCTTCCTTCCATTACTCATCATTGCTCTCAAACCCCGTTACCTTTCATTTCCCTCTGTTTC AATCACTCACGAATTTTGATTTTTGTTTCAGGTGCTCGGGGTGCACGCACGAGTTCAACCTCCACCGTCCGGTTGTATTG GAAGAAGCTACCGAATTCTTTAATCGATACGGCGTCGAGGACTTCACATTTGATACTTGCAAATTGGTATCTTCCTTTAA CTCTCTTCTTATTTCACTACAACTTATTTCATTTTGCTTTATAAAAGTAGGTTATCATTCACCTAATCACCTCTAAATTT TAATTAATAAGTTTTTCATATTAGTTTCTGCATAAACACCTGGATGCTGTTAGAATATAATATAGAACTATTCATTTTTG GGATAACTGGTTGCTTGACATGTATCAGAGTCTCTATGACTTAGTGGTTTAGAGTTCGATCCATGCTCCCCCCACTTTCT AATTTGAAAGTGGAATTTAAGCACATGGTAGGTGGGCATGTGCATTTATCCACACTTCAAGTCCAAAGGGCTCTTGCGTG AGGGGGTGTGTTAGAATATAATATAAAACCATTCATTTAGCCCTTACCCAACAACTTAAGCTTTTGGGATAACTGGTTGC TTGACAGATACATGTTAGCTCTATTCTCAATTAAGTTGTTAATAAGATTTTATGTGATAAGTGCTTATAGCCTTTGATTA AGTTGTTAACTCGAGAGCACCCTTTGCTAATTTACTTATTTGGTTTGACATTATGTGGTTTGGTTTGGTTTGTTTTGCAG TGGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCAACCAACCCTCTCATCGGGCTCTATGAGGAGGGTAC TCATAATGTAATTGACATTCCAGAATGCAAAGGTCCAGAGTTTGATTATATTATTCTTTATGTATGCGTTTGGTAGTCGT GATATAGCACCGGTTTCTATTTTTATGCATGTCACATTTTATCAATACAATTGAAATTGATACTGAGGTTAGAAACTGAT TCATTGTTGGTTTCATAAGAGCTGGGATTAATGTGTACAGAACTACAGTTTTCTGTTCCATTTAGGGTTAGGGGTTTCAG GTTTTGTACATATTGCAAAACTCTACATCGGTTTATCTGGTTTTGTGTGTATGAGTATTTTTTCAAAATGTTCTACTTGG TACTTGAAATTACATTAATTAAGCGCGTGGTGTCTTCTGTGTGCAGCTCATCATCCTAATATTAATGCAACCGTGGAGCT GCTTAGACGAGGTATTTTTTGGGTTTTGTTTTTAGCAGTATATGTATCATGTTTTATTCTTCAACTATTTATTCATTTAG CTTTTTCTCAATATCACCTAGGTATTACTGAATTAGATATTGAGCCGTATCTTGAAGATGAAGGTACCGGTGATTTGCGT TATGTTCAGGTGAATTGTTTAGCACAAAATCGAAGAGCGTCGATGATGAATTCAGTTAATAATTTGGAGTTTTGAATTTG GGAAAATTAACTGATTGTGGATGGATGTGTACAGATGGCGGTGACAACATACAACACGTCTCTTCCTGCCCCAGAAAGAT ATAAAAATGGTTAGTTCTTACTACTGAATTGTGTCAAAAAATGGAATTGGCATTTTATTTTTGTTAATAGAATTAAATTA ACCACTGTTTTATGTAAGTTTGTTTTCAGGGAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAGCGAACAGTCACCTG GTGTAGACAAAATGAATGCATTAGCGAATGTGAGCTTGTTGCTTCCTTTTTATCTTAGTATCATATTTTGTTTTAACTGT TATAATTCTTCTGTTCATTCCCTTTAAACCATAGAAAGTCAGGATTCATATGATTGATTGTAGTTTCTATGGAAAAATGG TGGGCCACGGAGCAGGCTTCATTTAATCCACTCTGTGTGGGCCAACTTTCAGACTTCTTCTAACAATGTAAGCTTAAATT TGTGCTAATGAATGACTTGTTTTTTATTAAAATGGAAAATGGTATGCTGTATGTGATACAAGGGAAATAGATGTTGTAGT TGCAGTTGGGAGGGAAGTACGGCTCTTGGTTCATGTACTGTTTTTGAATATAATTCATATTGATGCTGTACATTTATATC ACAGATATTGTTGATTCATAATGGTCGTATCACATCTTTTTTTTGGGGGGGGGGGGGACTAATTGATGTTATACAAGTTT TCCCTAAAAATATAGGGCCTTAATAAATATTTTTGCATTACTGTATATTATGTTTGGCTTTTAAACTTAGATTGCCTTTG TGAACATCATATGAACTGAAGGTGGACAATTATATATATTATAAACTCTAGCCATCACGAGATCTAGGGAAGGTTCGAAT CCATTGTGAGTCTATTGTAGATACTAGATAGTCTTCCTTTACTGGAATAATGTTCATAATACATGTTTGAGGGGCAATCT TTGGATGCTATAACCCTTAAACTTGATATATCCAGTTCAATTAAGTTTATGTAAAATAAGCAATATTGATGTATGATTAT TGTATGCAGAATTCACTAAGATTTGTAGACAATATATGATAACTTCATCATGTTTGAATAATTTTTCTTATCAAAAGATG GAGATATTGTCTCAGATAATATGTACTTGATGGCTCAGATAATTTTTGGGAATAGATGGAGACATCTTATTGGAGAAAGA GACTTTTGGGAACATGTAGGTGGAATTGATGTGTCATTGGCCCCTTCTAGTTTTGGACAGGCAAATACACGGGTAAGACT CTTATTCAGTTAATCTTCATAATTTTTATTGCAGTTGGGAAATACATTTAATCAATCTTTTCAAGTAATTACTATCTAAG CATGGTACAAGACAGAATACACACACACTGCAAATAAATAAATCTTGAGACGGACAAACATACATATTACATACATGTAT ATAGTGTTGCTACGTCGAGATGTATATGAAAATTTGTGTAAAATATCCTTAGTATGTGTTGTAACATATTTAGGGGTCTT ACTATTCCGACTTATATTGTTTGGAAGGGCATCATATCAAGGTCTTAGAGTGTCAAGTTGATGAGTCCATGAGTTTGTCT GGCATTCATTGGACACAATAGGCTCTATTTTTAACTGCTTGTGCTTCGTAAGCATTGAACCAAAAGAAATCACATTAATG GGTAGGAGGAGTGAGATGCATGAAAACATGCAGTCTCATAACACTGAGGACTTCTGTGCCATTAGCCATGAAAGGACTGA TATCTATCCTCTCTTCCGTCCTCTTTCTTACAGGCTTTTGATGCCCTGCTGCGAAAGTTACAGAAATATGTTCCACATGA ATCATCTGTTGCTGATTTGTATGCTGGAGCTGGGGTTATTGGGTTATCATTAGCTGCCACAAGAAAGTGCAGGCATGACC TGGATGGCTCTAAACCTTGAAAACGTTATATTCTAAATTTCTACTACATTGATGATTTGAAGGATTTATGTTTCTAGTTG TCTTACAGATCCATCAAATGCATCGAGATTAATAAAGAGTCGAAGGCATCTTTTGAAAAGACTATTGCACGTTTGCCCTC CACAGTCAACAGCAGCATCAGTTGGCATCATGCTGATGCTTCGAAAGTTAGTGTTTAATATCTGAAGCCTCATCATATAT TTCATGCTTTCATTTCTGAAATTTTATTTTCTAATTTATATAACCATAAGGCTTAATTTCAATTTTGGTCCCACTAATTC TGGTCCCCCTAGTTTATTTTCTCAATTTTGGTCCCCCTAATTTTCTTTTAGCTATTTTGGTCCCTAAGTTTAGTGATTCC ATGATTTTTGTGTCCTATTTTTTAAACAGGGCAAATGTTAGTAACTATTATGCATTACAATCTATTTATCTTCTTCTTTT AATTCTCAATTTATTTCGTGCATTAGAAAGTAATATTTTCAATAAGTTCTTAATTGTTAACAAAAAGTAAATTAAACTGA TATATAGTTGTTTTATTATTATTATTATTATTATTTTATTAGGAAAAACACTTTAATTACAGCTCCACCTAGTGAGATAT AGGAGTAGAAGAAAGCAAAATGTGAGATATGATAGGAAAAGAAGAGTGAGAAAGGAAAAGAAAGTGAGTGAAAATGAGAT GGAAAAGAAACCGAGTGTGAATGTATCAAAACTCATATTATGATACGTGATCAATGTTTTGCATGAAATTTTTTTATCAG ATTCTAATTAGTTGGATTTTCTATTGTCTTTTGAAATATGTTTTAGTCTGATATTATGTCATATAAGTTTTTAATATATT TTTAGTCTATCTAAAATTTTAAATCATATGAATAATTATTCATATAAAACGCATATACTTGAAAGTTATGCATAATAAAA TGGGTTGAACACTTGAACATGTATTATTAACATAAAGCTAATTTAGTTAGTTATACTTTTGCAACTTATTTATACTTATT TCAACAATAAATTATATTTTTTCATCAACAAATTATATTTCAATTAATTTGATAATACTTGATTAAAAAGTTTTCACCCT ATAATATAATCTAAAATATATATTCATGCTAAACATTGATCTCGTATAGTAGTAGTAGTAATAATAATAACAATAATAAT AATAATAATAATAATAATAATAATAATGGCAACAGCATTAATTTATAACGAGTGAAGTAAATTGAGATTTAAAAGAGATA AATATAATTACAAATAAAATGCATTGAATTCATAATACTAATGCATTGCCACAGTTAAAAAATAGGGGACCAAAACTGTA AAATCACTAAATTTAGGGAACCAAAATTAAGAAAAGAAAAGTAGGGGATAACATAATTATTGAATTTGGGGGACCAAATT GAGAAAATAAAGCAGGGGATCAAAATTACAGAATCACTAAACTAAGGGACCAAAATGGCAGCTAACCCTAACTTCGCTGC AACTTTTATGCATATATCTTTCATCATTGCGTTTGAAGATTTTATTTGGGAAGGATACATTTGGGTTGAAGTCCCTAACT TCTTATCAATATATTTTTTTACGTTCAAGAGAAAAATAAATTCTGTTTCTTAGCTTTTATCCTTGTCAAGTTGTCATGTT TTCTTTGGAGCTCATTGTATGAATCATTTGCATGTAACAGGAGCCTCTTTTGTGGCTTGTGGGCTCAGATGTTGTTGTCA TTGATCCTCCTAGAAAAGGACTAGATGTATCCCTTATTGATGCATTGAAGGATATATCATCAATCGAGCGTAAAGTCCTA TCATCACCGGAACGGTTGTTTATTTGTGAACTTCTCAATATTTCAATTTGAAAATATGTCCCCAAGTCAGTGTCTGATTT AGTGCACGTTACCTGCAGCTCAAACTCAGTCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCTAAAGAAGCTTCAGTCC ATATTGGTAGCAAACCAGCTTTGGTTAATGACCCTCAATCAGTACCAAAAACCCTTATTTATATAAGTTGTGGATGGGAA AGTTTTAAAGAGGTATTTCCATGATCAATCTTTGATGGGTGTATCTTGATTTTATCAAACTTGAATACTCCTCATTCTAA AAGTTGCTGCCTGACAGGATTGCAAGTCATTGTTGTCTAGTAAGGCATGGCATTTGGAGAAAGCTCATGGTTTTAACTTC TTTCCCGGTACCCAAAGGTTTTTTTTTCCCTATAATTTCTTATAATTTATCTATTTTTAGTATTTATTATTCCTTTCAGT TTCTTTTATATTTGCAAAAAAAAAAGAACTTGGAGTTAATAAATTGTTTTTTTGTCTTTCTCTGAAGTCTGAACTACATT GAAATTGCATTTCAGCTTTGTACACCTCAACCTTTATATGGTTATTTGATAGGATACCTGGGCCTTGATTCGAATGAGGA CATAATTTTAGGAGCATCTAGTGGAAGGCCTAGTATATGGAAAGTTTACACTAGGAGAAGGAGTGTGGGGTCAGGAGAGG GGAATGAGAGTTAGTTAGTGACGTGTCTCATGATTCCCTTGCTTCCAGGGATTCGCGCATTTGGGGGAGAGAGACTAGAG GGTTAGAGGCATTCATGCTTTTGGGTAGGATTCCTAGACTCTGGAAAACTACCTTTTTGTAGAGTTCTTGAGCTCATCGA TTTCCCTAAATTACATAATATACAGTTCTGAGTTATCAGGTTCTATCATTATTATCCACTTCAAAAATAACTGTTAGAAT ATAAAACCATTCATGTGGCCCTTACCCAACAGCTTAAGCTTTTGGGATAAGTGGTTGCTTGACAATAACTAATAGTTTTC AATGTTTCTGTATACTTATTGGTTACTTAGAAGACCATGTATGTACACTGTACTGTGTCATCATGCTCATTAGTCATTAC TAATCCTTGGTCCCTGATAATATACAATTTTTGGGAACTAGTATCTCTATTTTTTTTAAGTTTACATTTAAGAAAATAGT ACATTTTAAGTTGCTCACTAGGGTGTTTTTATGGAATAAAAATATGCCTTTTTTGTATTTTTTTAAATACTAAAAACAAA ATAAAATTTACCGAGGGACTAATTCCATGAAAAGGGATTCTTTCAAGGATATAATATATGTAAACCTTTATTTTATTTAT GCAAAGTCACAGACTTATGTACAATTCATGGAGCCTTTTACTTCTAAGTGTAGGTGTGCGGAAAAGAAGAGGGGGGGGGG TGGTGGTCGGGGGCAAGCATGTTCAGATAGAGTTAGACCTTGGAAACTTGACCACTAAACCAGGAACCCAAATAATGGGA ACAGTGGAACACCCAAGGAAACTTAAATGGCATTTTGAGATGAGAGATTTATATTTGAACTTTCTTGTTCTCAACCTGTC ATATTTTCATCATGTTTAATCTGTGAAACATTTTATGGACTACTCAGAGAGGCATGCTTGTGCAACCTAAATTTACCATC CAAGATTTTGCTCATCCTCTCACACTTCTAAGCTTTCCATGCTATAGTTCGATCCTTGTCCATCATTGAAAAGTTTGTTG AAGTAATTCTTCCATCTCTCTCTAATACCTTCGTAACCAAGATTGTTCCCTCTTCATCTTTATTACGTCTCACCAGGTCC AAATCTCTCTGTTTTCTTTCTCTCTTTTTGGCATGCTTTTATATTTTCCGTTCTCCATTTTTTGTCCCAAGTAACTCTTC ATAAGCCTTGGATCGCTTCACTCACAACTTTCCTCATCTCATTTCTAGCCTTCTGATAAAATCCCAATTTTCATAAAATC CCAATTTTCAGCGCTGTTACCAAAAACAATAAAAATTAAGGAGGGAACGATAAAAAAAGTGATATTTTAAGGAGTAAATA TATGTAAGCCTTTATGTTTTGATGCGAAGGCACAGACTTATGTTCAACTCATGAATCATTTAAATTTGTGTTTGTGAGTG TGTGAGTGCGTGCGTGTACGAGAGCTTTTAAAGTGTAGTGTGTGCAGAAAGGACAGGACGGGGAGAGGGAGCATATCCAG ATAGACTTAGACATGAACATGACTACTAAATCAGGAATCCAAACACCCAGGACACTTAAATTGCATTTGGAGAAGAGATG TATATTTGAACTTTTCTTGTTCTCAGCAGCAGTGAGCATGCCCCCTTCTCAAACCTAACAAAGCACTACTATAGACTAGC ATGCCCTAGAAGCATCCAACTTGTCATGTTTTCATCATGTTCGATCTGTGAAACATTTTATGGACTAATCAGAGAGGCAT GCTTGTGCAACGTAATTTTAACTTAGTATTTGTTGAAGCCCTACAAGCTTTATGTATGTACTCTAAGTCTAAACATGTGA CGAACTTAAGAAAGTCAACCATCACTCTGCTAGGTCAGATAAAGGAGTGCTTTTCCTGTCTCCATAAAATGCATTCTGTA TATATTATCCGTGCCATGATATCTACTTTGAGTATGTTCCCTCACTCTCCTTGAATTTTTCCCCCTCATATTAAAATTTT ACAATATCCTTTTATCAGAATTATATATAGGATACATAGTGTAGTTGATTCTATGATTGTTCTTTGCATAGCTTCCCCTC CTCCCTGAAAAATTAAAGTATATTAATTTCTCATTTACCAATGCAGCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCT CAGAAAAAGAAACCAGTAAAGAAAAAGCACTTGCAAGGAGCTGCTAGACATTAATTAGCACATGCTTAAATGCCAGGGAT TTCATTAACAACTGAGAATGAGCGCTTGTATTTTTGCACGGAAGAAAAGAATTGGATAAATGTTGTAGTAGTCTTAAGTG GAAGGAGTTGTCCATTTGTGTGCGTGTTGTTTGGAGGAGGGGTGTTTTGTACTAGTAAAAAGGGAAACTTATTTCATCAT TTGATGAATTTTGTGTAGAAGGAATTTAATGTATATAGTTTTCAATCAAATTTGAAGCTTATACATCTTCATGCTTTTAA TTCAAGTAAAACAAAACTGAGTAATAACTTCTCATGAAATAAAAAAACCAATTTGTGCCAAGAGAGCTGCTGGCCATTCA ATGACTAGGAAAGCTTCAGTTCCTCTTTTCTCTGTTCTTATGTTTTGCCAGGTGAGGAAAGACTGTCAGAATGTTGTAGG GCAGTAGATCCTGTCTGGTCAAGATCCCAATTACAGGGGATACCTATTAAGAGATCAGATCACATCATTAGGTTACTTAT ATATGGAAATTTATATAATTTAAGATCAGCCATGAATTTTATTTTGCTCCTGAGATTCTACTAGAAAAATACTGACATAT CTAATTCATGTTTGAATAGTTTCAATACTAACCCCAGATGCCTGATACTTGGGTACCACAAGCAGATGGCGAAGTCCAAC TTGCCTGAAGAGGATCATTGCCTTTGCTACTGATACGCTCTCTAGCACTGTAAAGGGAGTTGTATTAGTGAGAGGCTGTA GATCAACAAACATCTCCATTTCCTCCCTTGTTATAGCCACCTCTTCCATATTCCCTCTCTCAGCCAGCTCTACCGAGGTA AATTTCTCTCTTACTTCCCATTCCTCTGTTCTCCTTCTCTCTTTCAAGAACCACTTCTTTTTTAATGCTTGGATAAGGTG TGCTCTTAGAATTAGTCCATGCAGTTCTGTTGCCTCATTGGCCTGTCCTACCGGTGGTACTACCCCATCATCCATAACAG GGAAACCGTTATGGGTGGTGTTTTTCAAGGCATCTACTATATTGGCTACCTTTTCTACTCCATGGAGGGAAATCACTGCT GGCTTGACATCAACAAGATCACCTACAGTGAGATTTCTCATCCATGGTTCAGGATTTGCATCCATGAAAGGAAGGCCTTT CAAGTGCAGTATAATCTCATAGATGCTTGGATTGAAACAGTCTCCGACAGTTTTGGCTATTAGGAGAACCATCATTGTTA TTGGTAGCAGGAGAAGATTGCTGGTGAGTTCAAGGAAGATCACACATAAGGATACAGTCATCCTCATGGAACCAGCCATG AGGGAGGCTGCACCAAGTACTGCAAACAACCCTTGATCATTTTTTGTGTAAGGTTCCATGAAGATGCCGATAAGGCGGCC ATAACCTGAGCCCATAAGGATGATTGGGAGGAACAGTCCGGACGGCACGGCAATTCCAAAAGTAAAGAGTCCCAATATGC AATAGAGTGCAAAGAAAATTAGGAGGGAGAAGGGTTGATATTCTTGAGAAGTGTTTGTTGAGAATATGTTTCGAACAGCA TCGTCATTAGTTGTAAGCAGAAGGGTGGCAAGATCGTTGTAGTGGCCAGGTGGGCAGTTGAATTGTTTGAAATTTCCAGA CCTTCCATTGGTGGGGCAGACAGACTCTGAATCTGGAGGCAGTGAGCCACAAGGGGTACATTTTGCTAGGAATGGGAGAC CATATTGACACACTGATGTGAAGAGTGCAACTGCAAGACTGAGGAGGAGTTTGTGCATTCTTCCTTTCCTGCAAAAATTA AAGGTAGGTAGATACTATCTCAGGAATCATGTCATAGATATCATCAATTTTAATTGTATCACTTGGCCTGCTTTATTAGA GTGCGAACCCCCAATATACTTTGGGGTAAAATGCTTTGTGTTTAAAGGGTGTTTAGATAAATAACTGAATTAAGCACTTA TGACAATAAGCGCTTATCACATAAGTACTTATTCATAAGATAGCTTGTGTAATTCATTGAAATAAAATCAAAATATCTAA CAGGTAGGCATAAACACGTATTTATATGCTAATATGAGCAGCTTATGAAAATAAGCTCGAAACAACTAATAAGTAGGTCA CAACCTATTTTCATAAGCTTACACAAACACATGCATAAGCTCTTATGGTATAGCCGTATAGATAAACTCAAATAAGCTAA CTCGGCCTTAGTTTCATTAGATGCCATAGTTGTTTGGCCTTGAGCAGTTGAGCACTCATGTTTGTACCCTCAAGGACAGT GACTGGCACAATTTTAGTCTTCATTGGGTAATGGGTTAATGTTGTGTGGTCAGTGTAGAACATGAAGTCTTGTGATTTTC TATATTTTTATGAGTAACTATGTGACCTTAAACTTTCATGATATGCAACGTGTTTTGAGACTAAGGGTGGTCATTACTTA CTGATTGATGAGATTGTAGAGTCTGAGGATCTTGTGTAGAAGATGATTGTAAAGGCTTCCCAATATCCCACCTACGATTC CAATGACTACAACTGGGATGATATCAATAGGATGGTACCTAACAGTGACATTGCTCACATCAAACATGATCAACCCTCCT GACCCAAAAAGGCCACATTTCCCAGAGTTGCAGATTTCAATGAAGGCCCTGAGCACCACCACCACAACAGCTGTGCAGAA GAAAGTTCTCCATAGGAGTGCACTCCTCCACCATGTTGCCACCTCTTCAAGGGCAAAGAGAACTCCACCCACAGGTGCGC GAAACGCTGCACAAACTCCTGCAGATGCACCGCAGGTAATAAGATCCCGGCGATCGCGATCGTTGTTGAAGTATCGGAGC CAGCGCCATTTGATCTTGTAATTGTCAGGGCCTCCCTGGCCTAGTAAGGAAGCAATGCAGCTTCCTATGTGTACCAAGGG TCCTTCTTTCCCCAGATCTAAGCCTGCAGCGACGGCTCCAATGCTTCCAATTATCTACAATAACAAATGCATGAGATGTG GTGTGAACAAGAATTGGCAATTTGCTGGTAAAAACATGAATGACCAAATGGAGATGTGACGTGAATAGTTATTATAACAT CTTTGGATTAACTCTCTGAATCAATTATGACACCCAGAAGTCACTCATGTAAACTTCTCATAATTGATTTTACCTTTAGA ATTAATTGTAGAAAGACTTCCGAAGTAATTTTTACCAGTTACAAGAAACTTGATCAGTCACTTTTGTAATTTGTGGTGTT CTATACATTTTCTGCCTGATAGTATTGACACCCCATGATTATTTTCTTGATTTTGATTCATTCACACCTCATTTGCTCTA CGATCTCATTTCCACTATATTTCTCTAACTATTTCTCACTTCTATTCCTATCACATTACTAATCATATCTTTCATTTCTC TCTTTTTCCTTATATCTCTAGGTGTCTGTGTTTTATATGTAAACATAACTTTATTCTTGTTTACCACTCATTGGACAAGT TGCTGAGTATTAAATGATTGAAACCAACAACACACTATCCATCCCTGTGAGCTTTCCCTTTGATTTTTTGGGTCCACTTG TCAAGCTGTG
CDS sequence (LotjaGi1g1v0623300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTTCCGTCTAATCTCAGCTCCGCCGTCCTTCCCTCTCTTCACCTGCCACGCCACCTCCACCTCCACCTCCGCCAC CACCACCGCCCGCCCCCTCCCTCCGCCTCCTCAAATCTCGCCGGCGACCCTAACTCCTATAACTCCACAGCCCCCGCCGC CAACGTGCGCACTCCACTGCTCCCACTTCCAATCGTGCTCGGGGTGCACGCACGAGTTCAACCTCCACCGTCCGGTTGTA TTGGAAGAAGCTACCGAATTCTTTAATCGATACGGCGTCGAGGACTTCACATTTGATACTTGCAAATTGTGGGGTTGGAG GTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCAACCAACCCTCTCATCGGGCTCTATGAGGAGGGTACTCATAATGTAA TTGACATTCCAGAATGCAAAGCTCATCATCCTAATATTAATGCAACCGTGGAGCTGCTTAGACGAGGTATTACTGAATTA GATATTGAGCCGTATCTTGAAGATGAAGGTACCGGTGATTTGCGTTATGTTCAGATGGCGGTGACAACATACAACACGTC TCTTCCTGCCCCAGAAAGATATAAAAATGGGAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAGCGAACAGTCACCTG GTGTAGACAAAATGAATGCATTAGCGAATTTTCTATGGAAAAATGGTGGGCCACGGAGCAGGCTTCATTTAATCCACTCT GTGTGGGCCAACTTTCAGACTTCTTCTAACAATATAATTTTTGGGAATAGATGGAGACATCTTATTGGAGAAAGAGACTT TTGGGAACATGTAGGTGGAATTGATGTGTCATTGGCCCCTTCTAGTTTTGGACAGGCAAATACACGGGCTTTTGATGCCC TGCTGCGAAAGTTACAGAAATATGTTCCACATGAATCATCTGTTGCTGATTTGTATGCTGGAGCTGGGGTTATTGGGTTA TCATTAGCTGCCACAAGAAAGTGCAGATCCATCAAATGCATCGAGATTAATAAAGAGTCGAAGGCATCTTTTGAAAAGAC TATTGCACGTTTGCCCTCCACAGTCAACAGCAGCATCAGTTGGCATCATGCTGATGCTTCGAAAGAGCCTCTTTTGTGGC TTGTGGGCTCAGATGTTGTTGTCATTGATCCTCCTAGAAAAGGACTAGATGTATCCCTTATTGATGCATTGAAGGATATA TCATCAATCGAGCGTAAAGTCCTATCATCACCGGAACGCTCAAACTCAGTCCAGGAAGAGAAAAGACCATGGGTTTTACG TGCTAAAGAAGCTTCAGTCCATATTGGTAGCAAACCAGCTTTGGTTAATGACCCTCAATCAGTACCAAAAACCCTTATTT ATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCAAGTCATTGTTGTCTAGTAAGGCATGGCATTTGGAGAAAGCT CATGGTTTTAACTTCTTTCCCGGTACCCAAAGCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAACC AGTAAAGAAAAAGCACTTGCAAGGAGCTGCTAGACATTAA
Protein sequence (LotjaGi1g1v0623300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFRLISAPPSFPLFTCHATSTSTSATTTARPLPPPPQISPATLTPITPQPPPPTCALHCSHFQSCSGCTHEFNLHRPVV LEEATEFFNRYGVEDFTFDTCKLWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKAHHPNINATVELLRRGITEL DIEPYLEDEGTGDLRYVQMAVTTYNTSLPAPERYKNGKVQVTLVWNSRSEQSPGVDKMNALANFLWKNGGPRSRLHLIHS VWANFQTSSNNIIFGNRWRHLIGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRKLQKYVPHESSVADLYAGAGVIGL SLAATRKCRSIKCIEINKESKASFEKTIARLPSTVNSSISWHHADASKEPLLWLVGSDVVVIDPPRKGLDVSLIDALKDI SSIERKVLSSPERSNSVQEEKRPWVLRAKEASVHIGSKPALVNDPQSVPKTLIYISCGWESFKEDCKSLLSSKAWHLEKA HGFNFFPGTQSIEVLAVFKRGPQKKKPVKKKHLQGAARH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 519 | 500 | - | – | |
| PANTHER | 23 | 501 | 479 | 3.4E-239 | – | |
| SUPERFAMILY | 58 | 500 | 443 | 3.42E-32 | ||
| ProSiteProfiles | 64 | 501 | 438 | 32.318 | ||
| Gene3D | 109 | 283 | 175 | 3.5E-12 | – | |
| Gene3D | 284 | 431 | 148 | 6.3E-12 | – | |
| Pfam | 293 | 385 | 93 | 6.6E-6 | ||
| CDD | 308 | 385 | 78 | 2.94408E-4 | – | |
| Gene3D | 432 | 500 | 69 | 2.6E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Molecular function | RNA methyltransferase activity | Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule. |
Expression pattern of LotjaGi1g1v0623300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…