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GO:0008173

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description RNA methyltransferase activity
Full defintion Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
Subterm of

Relationships

The relationship of GO:0008173 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah

Associated Lotus transcripts 38

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0055679.1
– S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Theobroma cacao] gi|508710875|gb|EOY02772.1|
GO terms
2
Lj0g3v0181439.1
– AGAMOUS-like 26 isoform 1 [Theobroma cacao] gi|508704835|gb|EOX96731.1|
GO terms
3
Lj0g3v0266349.1
– RNA methyltransferase-like protein [Medicago truncatula] gi|357517191|ref|XP_003628884.1|
GO terms
3
Lj0g3v0266349.2
– RNA methyltransferase-like protein [Medicago truncatula] gi|357517191|ref|XP_003628884.1|
GO terms
3
Lj0g3v0266349.3
– RNA methyltransferase-like protein [Medicago truncatula] gi|357517191|ref|XP_003628884.1|
GO terms
3
Lj0g3v0266349.4
– RNA methyltransferase-like protein [Medicago truncatula] gi|357517191|ref|XP_003628884.1|
GO terms
3
Lj0g3v0305119.1
– PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cicer arietinum] gi|502184040|ref|XP_004517271.1|
GO terms
2
Lj0g3v0305119.2
– PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cicer arietinum] gi|502184040|ref|XP_004517271.1|
GO terms
2
Lj1g3v2994560.1
– TRNA guanosine-2'-O-methyltransferase [Medicago truncatula] gi|357502123|ref|XP_003621350.1|
GO terms
3
Lj1g3v2994560.2
– TRNA guanosine-2'-O-methyltransferase [Medicago truncatula] gi|357502123|ref|XP_003621350.1|
GO terms
3
Lj1g3v3834390.1
– S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Theobroma cacao] gi|508710875|gb|EOY02772.1|
GO terms
2
Lj2g3v2585500.1
– PREDICTED: probable dual-specificity RNA methyltransferase RlmN-like [Cicer arietinum] gi|502097051|ref|XP_004490899.1|
GO terms
2
Lj3g3v0290440.1
– 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula] gi|357454725|ref|XP_003597643.1|
GO terms
2
Lj3g3v0290440.2
– 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula] gi|357454725|ref|XP_003597643.1|
GO terms
2
Lj3g3v2718810.1
– 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula] gi|357454725|ref|XP_003597643.1|
GO terms
3
Lj3g3v3085960.1
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
GO terms
2
Lj3g3v3085960.2
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356541487|ref|XP_003539207.1|
GO terms
2
Lj3g3v3085960.3
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
GO terms
2
Lj4g3v0286120.1
– PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max] gi|356510770|ref|XP_003524107.1|
GO terms
3
Lj4g3v1212310.2
– TRNA/rRNA methyltransferase family protein isoform 1 [Theobroma cacao] gi|508776921|gb|EOY24177.1|
GO terms
3
Lj4g3v2375050.1
– PREDICTED: 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB-like [Cicer arietinum] gi|502151214|ref|XP_004508331.1|
GO terms
3
Lj4g3v3043940.1
– TRNA/rRNA methyltransferase family protein [Theobroma cacao] gi|508783395|gb|EOY30651.1|
GO terms
3
LotjaGi1g1v0090900.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT2G39670.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q8DG98|RLMN_THEEB Probable dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|G7KBR0|G7KBR0_MEDTR 23S rRNA m2A2503 methyltransferase; Found in the gene: LotjaGi1g1v0090900
GO terms
2
LotjaGi1g1v0508500.1
– TRNA guanosine-2'-O-methyltransferase; TAIR: AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|O67577|TRMH_AQUAE tRNA (guanosine(18)-2'-O)-methyltransferase; TrEMBL-Plants: tr|G7L451|G7L451_MEDTR tRNA/rRNA methyltransferase SpoU family protein; Found in the gene: LotjaGi1g1v0508500
GO terms
3
LotjaGi1g1v0508500.2
– TRNA guanosine-2'-O-methyltransferase; TAIR: AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|O67577|TRMH_AQUAE tRNA (guanosine(18)-2'-O)-methyltransferase; TrEMBL-Plants: tr|G7L451|G7L451_MEDTR tRNA/rRNA methyltransferase SpoU family protein; Found in the gene: LotjaGi1g1v0508500
GO terms
3
LotjaGi1g1v0623300.1
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G27180.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q6M9M7|Y1998_PARUW Uncharacterized RNA methyltransferase pc1998; TrEMBL-Plants: tr|K7MFD5|K7MFD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0623300
GO terms
2
LotjaGi2g1v0360600.1
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT2G28450.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24; TrEMBL-Plants: tr|K7LTE4|K7LTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360600
GO terms
2
LotjaGi2g1v0459900.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT3G19630.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q6MDD0|RLMN2_PARUW Probable dual-specificity RNA methyltransferase RlmN 2; TrEMBL-Plants: tr|I3T8H2|I3T8H2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0459900
GO terms
2
LotjaGi3g1v0022800.1
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G21300.1 RNA methyltransferase family protein; Swiss-Prot: sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009; TrEMBL-Plants: tr|G7IHW5|G7IHW5_MEDTR 23S rRNA (Uracil-5)-methyltransferase RumA; Found in the gene: LotjaGi3g1v0022800
GO terms
2
LotjaGi3g1v0022800.2
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT3G21300.1 RNA methyltransferase family protein; Swiss-Prot: sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009; TrEMBL-Plants: tr|G7IHW5|G7IHW5_MEDTR 23S rRNA (Uracil-5)-methyltransferase RumA; Found in the gene: LotjaGi3g1v0022800
GO terms
2
LotjaGi4g1v0026400.1
– Small RNA 2'-O-methyltransferase; TAIR: AT4G20910.1 double-stranded RNA binding protein-related / DsRBD protein-like protein; Swiss-Prot: sp|Q9C5Q8|HEN1_ARATH Small RNA 2'-O-methyltransferase; TrEMBL-Plants: tr|I1K2Z2|I1K2Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0026400
GO terms
3
LotjaGi4g1v0165700.1
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT1G60230.1 Radical SAM superfamily protein; Swiss-Prot: sp|A0LQM1|RLMN_SYNFM Dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|I1KXG4|I1KXG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0165700
GO terms
2
LotjaGi4g1v0165700.2
– Dual-specificity RNA methyltransferase RlmN; TAIR: AT1G60230.1 Radical SAM superfamily protein; Swiss-Prot: sp|Q3A2Z4|RLMN_PELCD Dual-specificity RNA methyltransferase RlmN; TrEMBL-Plants: tr|V7C8D7|V7C8D7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0165700
GO terms
2
LotjaGi4g1v0173100.1
– RRNA methyltransferase; TAIR: AT4G38020.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|P94538|YSGA_BACSU Uncharacterized tRNA/rRNA methyltransferase YsgA; TrEMBL-Plants: tr|G7LIJ4|G7LIJ4_MEDTR tRNA/rRNA methyltransferase SpoU family protein; Found in the gene: LotjaGi4g1v0173100
GO terms
3
LotjaGi4g1v0195000.1
– TRNA/rRNA methyltransferase family protein; TAIR: AT4G17610.2 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|Q13395|TARB1_HUMAN Probable methyltransferase TARBP1; TrEMBL-Plants: tr|A0A0R0FD66|A0A0R0FD66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0195000
GO terms
3
LotjaGi4g1v0348400.1
– TRNA guanosine-2'-O-methyltransferase; TAIR: AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|Q6FF50|RLMB_ACIAD 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB; TrEMBL-Plants: tr|K7MJI7|K7MJI7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0348400
GO terms
3
LotjaGi4g1v0445300.1
– RRNA methyltransferase; TAIR: AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|O94631|MRM1_SCHPO rRNA methyltransferase 1, mitochondrial; TrEMBL-Plants: tr|I1KPW8|I1KPW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0445300
GO terms
3
LotjaGi5g1v0261900.1
– TRNA (cytidine(34)-2'-O)-methyltransferase; TAIR: AT5G26880.1 tRNA (cytidine(34)-2'-O)-methyltransferase; Swiss-Prot: sp|P74516|TRML_SYNY3 Putative tRNA (cytidine(34)-2'-O)-methyltransferase; TrEMBL-Plants: tr|I3S4V5|I3S4V5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0261900
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0008173
Molecular function RNA methyltransferase activity 1 2.63