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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0628400 |
| Transcript ID | LotjaGi1g1v0628400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Membrane-anchored ubiquitin-fold protein; TAIR: AT3G26980.1 membrane-anchored ubiquitin-fold protein 4 precursor; Swiss-Prot: sp|Q9LSD8|MUB4_ARATH Membrane-anchored ubiquitin-fold protein 4; TrEMBL-Plants: tr|I3T0G8|I3T0G8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0628400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:117845191..117847560) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGGAGGAAGAACTAGTGGAGCTCAAGTTCCGTATCTACGATGGATCCGATATTGGACCCTTTCGTTACTCTCCTAC TTCCACTGTCGCTATGCTCAAGGACAGGATCCTCGCTGAGTGGCCAAAAGGTTCTTTTCTGCTTCTGTTCTGTTTAGTGT GTGTTTTCAATCCTTATTATGTGATAGTTTTAATTACTAGTAGTGTTGTTAATTGCGGATGGCGGGTCATGGTGAAAACC CACTGCCATACATGACAAATAATGGCGGAATGTTGCGGGATTTCGGCCCAGAAAACTGCTATGGGCGGCGGCGGGTATTT GACAACACTGGGATCAATGCTGGTTGTTCTTATGATTGTGCAAATAGGGCTATTGTTATTTTATTTTGTGTTTGATGCTT GAAGGTGTTGCTTGATCTTGTTTTGAGGAAAAAAAGGGTGGTCTTTATTATGAGTTTATTCCAAAATGGGGCAAGTGGTG GTTTGATTTTGTTTTGGTGTGCTTTGTGTTACGAGTTTGATAAACTTGCTTGGAAAATATAAATGCGTATTGCTTTGATC GGGCCGAATTAGGTTACGGCTATAGATTCTTTGATTTGAGTGGTTTAGTTTAGAAGATTAATGAATGTGATGCCTGTCTG GGTTGAGTTGTTAATGTTAGGTTCATTACTTCTAGTAATGAAATTGTAAAGAAAGCCTTGCCTCATAGATTTTGAATTTT GAATTTCAGGGAAGACTTGCTGTTTGTTAGATTGAATCAATTCGATAGGCTTTATCCAGAAAATTTGAATGGTGATATTT TGTGCCCCTCATTTGTCGGCATGTAAATTTGAGCTGTGGGCATTGGAAATGCTAACTATAAATTTAAGCAGTTGATGGTA ATGCGTTCATGTGAACTTATTATCTTAGTTTTACCTATGCACCGTAAATTGAGATGCTATCATGTCGCCTGGAAATCTGC TGGTTGGTTAATATAGGGAGACATTGTGTCTCCATTACATTTTGCTGTAATTAAGTGGTTAGGTTAGGTTGGGTAATTGG TCTAGTGATCCCTGATCAATGAGAATTTTTTTTGTTTCACCTTCTGGGTTCTGGTTTTCCCTTGCTTGTTATTCGCCGAG TGGTATTATTATTATAAGGTATCATATTTAACTCTTTTGGTGTAATATCAGAGGCCATTAACTCAGAGCTGTCTATGGTG CATAGATGTAAATTTTTTTGTTTTTACGTTGTAGTCCTCGTAAAAGTTTTCTAAAACGGTTAATAGTTTTCAAATTTTCA ATCAAAAAGCCCCTGAACATCTTGTGTCCACCAGTCCTCTTCCCTCGTTTGTTGTCCTCCACGCTTGCTCCTCCTTAGCC AAGACGTCATCTCGGACATGTGCACCTCTCCTTTGCAGATTTGTCAAAAGTTTTTATCCCTATGGTTGTTTAATGACCAT TATGCTATGGGCAGCATGTTAGTGTAAACTTTCTCTTTGCTGATCCAGAACAGTAGGCCCTCATGCTGTTACGTAAGCAG GCCTTCTGGTTGCATGGGTGTGTAATGCCAGACTGCCAGTATAAGTGGGTGGGTGGAGTTCGAACTTGGATGGGAACCGG AACCAGATAACTCAAAGCTTAAACATTTTGTTGGAAATAAGGTGATCCTTGATTTCTGATTTGCAGTAGACTGTAGACCT GCATCAAAGTTATATTGGCTGAAGAATTTATTCCAGCTGACAGCTGCCTGATCTTCTTCTTCCCCAGTCGATCTTCATTT ATAAACAAAACATCCCACCATGATATTCTGGCTCTGGTAATAACCATTAACTGGACAGAAATTTCAGTTATCAAGGTCTC TTTCAGTTATACAAATGCACAATATATGCATGAACTATTAAGTGATTACTCACTGTCCTTTTACTATATGATTTACTCTT TACCAACCAGTTATATTTTTAATAGACTACTGCCTTTGAGTGATGTTATCTTTGTTTTCTTATGGATGATTTTTTGTTTA CTTCGGGACATGTGGCATAATTCCTGTGATTTTTCATCTTGCTCCTGTTGCTTTAGTGTTCTATTCTCCTGCCTTAAATT GTGTTTTAATTTTCTTTTCTTACGGTTTATAAAAAATTTATCTTTTGTTTTTGTTTTCCATAGACAAGAAAATTATACCA AAGGCCGCAAATGATATAAAACTGATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAGTGTAGAGTACC TTTTGGTGAGCTTCCCCCAGCAGTAATCACCATGCATGTTGTCGTCCAACCATCTCTGGCAAAAGCAAAAACAGGTAGAT TTTGTTCTGAATTATGTTGTGTGATTATTTCCTACTGTTTTAATTATTGA
CDS sequence (LotjaGi1g1v0628400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGAGGAAGAACTAGTGGAGCTCAAGTTCCGTATCTACGATGGATCCGATATTGGACCCTTTCGTTACTCTCCTAC TTCCACTGTCGCTATGCTCAAGGACAGGATCCTCGCTGAGTGGCCAAAAGACAAGAAAATTATACCAAAGGCCGCAAATG ATATAAAACTGATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGTGAGCTT CCCCCAGCAGTAATCACCATGCATGTTGTCGTCCAACCATCTCTGGCAAAAGCAAAAACAGGTAGATTTTGTTCTGAATT ATGTTGTGTGATTATTTCCTACTGTTTTAATTATTGA
Protein sequence (LotjaGi1g1v0628400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPEEELVELKFRIYDGSDIGPFRYSPTSTVAMLKDRILAEWPKDKKIIPKAANDIKLISAGKILENNKTVGQCRVPFGEL PPAVITMHVVVQPSLAKAKTGRFCSELCCVIISYCFNY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 106 | 106 | 2.5E-61 | – | |
| Gene3D | 1 | 100 | 100 | 1.8E-37 | – | |
| PIRSF | 1 | 112 | 112 | 2.6E-44 | ||
| PANTHER | 1 | 106 | 106 | 2.5E-61 | ||
| SUPERFAMILY | 2 | 96 | 95 | 9.89E-27 | ||
| CDD | 6 | 93 | 88 | 4.32357E-49 | – | |
| Pfam | 6 | 101 | 96 | 1.9E-38 | ||
| ProSiteProfiles | 7 | 75 | 69 | 10.963 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0628400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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