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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0641100 |
| Transcript ID | LotjaGi1g1v0641100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TATA-box binding family protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|P50158|TBP1_MAIZE TATA-box-binding protein 1; TrEMBL-Plants: tr|A0A1D6KZ57|A0A1D6KZ57_MAIZE Uncharacterized protein; Found in the gene: LotjaGi1g1v0641100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:119818234..119829277) extracted from Lotus japonicus Gifu genome v1.2.
TGTGTTAAAGAATTACTTGGAAAGTTTCTGAGAGCGTTATATTAATTTTCTTGATCGCAACTTTTTCAAGAATTATCAGA GGTGTTCTTGTTTTTTGTCACACTAACAGGCAAGCAGAGTCTAGCTAGCTGAACATGGCAGAAGAACAAGGATATAATGG CTTAGAAGAAGGGAGCCCATTGCAATTGGTGAACCCCACTGTTCCCACTATTCAGTAAGTTTCATTTTCAGAAAAAAGAA GATCAAGAAAGATAACAGAAAAATGTGGAGTTCATGTGTTAAATTTTCTATTTGTTCATCAATGTATCTTCTACTCATTA TTATTCAGTTACCTTTTAGCAGTTCATGTTTCACTACTTGTATATCTATATCTATTCATATTATTTTGTAATTAGTACTA TTGAAGATAACATGTTATATTTTCAATTTTTACTACTTTTTTTTTCTAGGAATATTGTGTCCACAGTGAACTTGGATTGT GCCTTGGATCTTAAGAAGATTGCACAACAAGCTCGCAATGCTGAATACAATCCCAAGGTTCTGTTTCTGGCAATTCATTG AATTATTTAACTCTGTATCAAACAGAAGTTTCTGATATATGTGGTTTCCTTACTGATACTACAATGCAAATGTTGCTGCA GCGTTTTTCTGCTGTCATCATGAGGATAAGGGAACCAAAAACAACAGCTTTGATATTTGCTTCTGGAAAGATGGTGAATA TCACAGCACATTTGCAAATTCTATTTCTGTAAATTGCAGCCTATTGTTCATGCCTGTTGATTGTGCAGAAAATGTAGCTT TTTATTTAATTACATTACATCCATTCTATTTTTCCCCTTTCAAACATTTTTTTAATTTCTCTCAAAAAATCTATGAAATC ATATATATATGAACATGCTGATCTAATAATTAAGTTCATATGTAAAAATGTGTTGAATACATCCTTTAAATCCTTAATTA TATTTAGTGGTTTTTTACCATGTTTTCATTTCAATTTTGTGTTAACATTTTACTTTTGCTTTTCTAGGTCTGCACAGGTG CTAAAAATGAACAACAGTCAAAACTTGCAGCAAGAAAGGTTAACTTTTAGGTTTTATCAAATGGGCATCATACTTTAGCA TTTATGAAGAACATGGTTTTCCACTTAAAAATGATGAGCATAGTATATTATGCAATCAAGTTGAGTCCTACCCTCTCTAC TATATATAGTCTATAATACCAAATGATAATTGAAAACCAGGTCATGTATCACAAATTGAACCCTTGCCTTTTAATTAGCC AATTTCATTTATGTTAATAAGAGGTATTTATCAAGTCAATCTGATATGATTTTTCAGTATGCTAGAATTATCCAAAAGCT TGGATTTCCAGCTGCCAAATTTAAGGTATATATCTAATCTACTAGAAAACTACATAACTTGAAACTTCAAACCATAACAG CAATGAAATTGGATAGAGCATAGACCTAAGTTTTTTTTTTTTCCTTCATTCAAATAGGACTTCAGAATTCAGAATATTGT TGCCTCCTGTGATGTTAAGTACACTCTCGGACTTGAACTTCTAGCGTTCGAACTACGCCCCTTTTCAACTGTAAGTCGTA TTCAGATATTTCCACTCTGTGAATTCTGTCATATATCTCAGATCTTAAATGGACTAGTATATGAATTGTACTTCTTGAAA TTTTGCAAATAGCAGCACTCGTGAACATTGAAATTTAAAGCTTGATGCTATGATTTCAATGTCTAATACCATGAAAGATT TAATTTGCAGTATGAGCCAGAAATATTTCCTGGCTTAATATATCGCATGAAGCAGCCAAACATTGTTTTCCTCATATTTG TGTCTGGAAAAATTGTGCTTACTGGAGCCAAGGTATGTTTGCTTTTTCATGTATGTTTCTGTTCTGGTGCATTTTGAAGC CAAAGTTCACCATGTTTTCATTATTTGACATTTAAGGCAAGAGAGGAGATATACACAGCTTATGAGAAGATGCATCCTGT TCTTGCAAGGTTTAGGAAAATTCTGAAATGGTATGATAGGAGAACTTTTTATTTACATGTTGAATTAATGCTTCTTTTGT TAGTGGCATTGAGAGGATTATGAACTAATGGTTTGATTTTGCTGACATTTTTACTTGACAGATATACTTCAAAATGGGGG ATTTGGTATATAATTATATATTTGGATCAAGCTTTGTTCTCTGCTTTTGGAGTATATGGAACAAGACATGGTCACTTTCA TATTTTAGCTAAGAAAATTCCAGGACTTCCTTATTGTGTTTGTGCTACTTTCTTAAATCTTAGATAAAATTAAATGGAAG ATCTTCTACTATTTGATACTTTGTAGTTTGTATGTGTGGCCTTGGAACAAAGAATCATAAGTTTCAATGTAATCCTCAAA CTTGATTAATGATTAGTGTAATACATAGATTGACACCTACAACTTTTAAGCGGTTATGTTATTATTGAATAACTACTAAT GTTTACCCCGTTTGTATGGTTGTATCTTCAAGATTTATCCCTCTTGATCCCACATAATTTTTGTTTTTTTTTCCAATAGA TACACCTTTATACATTGTTTTATCCTAGGGGAGTAGATTTAGGGTTAGGGGTGGAATTCGGGGAATGTAAAAGATCACCC AACTGAAAAACAATAAATCCAAAGAACCAAAAGTTATAAGTGTCTCTCACAACACCACCAATTGAGCACGCACATAAAGA AGGAAGGTAGCTGTCATCTGTATTCAATTTATCTCGTTAATCTTATGGAGAGCTCAATAACTAGTAATATAAGAACTCAC ACGATCAACATGAGATAAAAGTAAATAATAATAATAAATCCGTTTCAACTAAATAGTTAATTAAAAATATTAGTTTAGCT CATGTGAAATTCAAGAAAGTATGTTACATAAATAGAAAAAAGACTTACAACTACGTACAAGATTATAATGAGCCAATGAC ACATATGAACCAAACCAATGACGGAATGACCCAATCCAACCCACCATAATGTGTTTGGTTTGGTTCAGTTTAATCGGATT CGCGAATCAAACTGTTTCATCTCACAATAAATTAAAAAAATACTTTTAAAAACTACTTTTGTGAATCACTTTAAATGGCA TATTTGTAAATTCAGACCAAGAGATGAAGATATTGTGATTGGGAGAAGAAGATTTGGGAACATCTGTGGTTAAGGTTCTT TCCGTGGCACAAATGCTTTTCCTTCTATTTTTGTTTGTTTTGTCGTGCAAACATCAATCATCAATGTCTTGTTGAATGAT CAACCACTTCAAATATCTCACTGTTTTCAGAAGAAACTTTCAATCTCTGATCACAAATTCCAAAGAAGAATCCATGGCCC AGTTCACTACACACGGTCGCTTGAAGCTGCTCTTCAATGGGGAAGTTGGGTCATCCATTTTGGAGCACAACAAGGACCCT TTTCACTACAAGTGCAGCAGATCAGCTCTGACACGCAAGAGAAGGCCAACAAGGTACATGGGTTCTTCAGCTGGAGGAAT TCTTCGATATGCAACTTCATCTATGAGAAACAAAGCCAACCGTTGCAATGCGGAGGCGCGCTTCACTGCTGGCAATGAGG GTGTGCATGATGAATATGAATATGATTCTGATGGTGTTGAGGATTTTGATTATGAAGATGATGTGTTTGGGTTTGATGGA GATGGCTTGTCTTGTTTCCGGGGTCTGGTATTGGATTTAGCTTACAGGTCATTTCTTTCTTACAATATTTTGTTTCTTTT CTGTATTCGCAGTAGTAATCTTAAGTTGTCACTTGTTTTCATGTATCATGTTGAGCACTTAACAATGTAATGTACAGAGA TTTTCAATTGGGGAAGTTCATCTGGGATTTTGCAGTTGATGTGATCTGATGCTTGTATAATTCATTTGCTGTGATTTATT GTTTTTAAACCTTCCCAACTGGTTTTTACTATCATGTTTTAGTTAGGTTGTTGATCTGGTTTTTTATCGAGCTCAATGTA CGGTGATCCATATAGCCGACCTCAGCCCTCACTTATTGGAATCAGGCTTTTGTGTTTGTTTTTGTTGTTGCTGTTGTATC ACTACTAAGACTGCAGGACTTAGGAGTTTGGGAATTCCATGTCAAGTTGTTGGTTTTGATGCATTGTTAATATTGAAATG ATGGTAATAATTCCTTTTGAAAGTGATAGTCCCTTTAAAAGATTATGAGAAACACTTGAGTTTGAATTGTTAACTAATTT CCAAAGAGGAGGCTGTTGAAGACCGGTGCTTCATAACATAGTGATGAATTGATTATGTGGGTATCATTTGGATTAAAGAA GAACTATTTTTTTGGCTGAAGTAGGAAATGTTTGGTATTATAACTGCAAAATTTGAATGAAGCCTGTAGATGTGAGTATT GATGTATACATGCATACTTCTGCTCTTTCAGTTTTTCATGAAGCTACAAATTTTATTTGTGTAAGCTTCAAGTGGCTATT TTATCGGGTATTTATCGTTTGATATGTCAGGGGGAGTTCGGGAACATTACCCAGGATCACCTTGCATTATTTGTGGGTTT CTTCAACACACGTGTGTGTTTCTCTGTATTCATTAGGGAATTCTTTTTCCATTCAAGATAACATAAATATAAGAATCAGA ATTGATGATGAGTTGGTTGATGCATTCTTCCTAACAATTTCTACAAATAACTAGGATGAAATATTGCATGCTTATCCTGA GTGTTCAGTGTTTAGTACAACTAGGATATGAAGTTGTAACATATAATTTTTTCTTTTATAGTCATCCATATCAAGACATC TGCTCAGTTGTTTGCTTATGGTTCTGACTGCTGTCATCCTGCTCCAGGCCAGTCAATGTTGTATGCTGGAAACGTGCCAT ATGTTTGGAGTTTATGGAGAAGGTCAGATTTTTTAGCTCAACATCTGATTAATCTCTATAATGCGGTTTATCATTTTGAG ATTGGCATGACTATGCGTGAAATTTAACAAAACCTTATTTGATGCTTGACTAAGGTGTGCTACATCATGTGAATTAAATG CATACAATTTTGGTAAATGACGCAGTATTTACTATATTATAAATCTTAAAACATCTGAGATTTCCACTTGGTTGAGAGTA TTTCTGACATAGCTTCACTTTGTTTGGTTTGTAGTTCAATATGTAACCTAAACCCATTTCACTTCCCAGGCCATAAGGCT CACTGTGCAGTGTGCACATACCTTACAGACACAGACCGAAATACTGATTCACAGCCACAAGTTTTGACTTTCTATTTTTC TTCTTTTTAGACAAGCGGTGAACATATGTTAATGAAATATGTTTTCAAATCTTGCTTGATCCAGGCTGATGTACTTGAGT ATTATGAAAAGACTGTGAACTCCCCCAGTGGATCTTTTTATATACCAGCTGTCTTAAGGGTATGCTCACTTTAATCATTA TTTTGGCACTGTGTCACCATTATAGCAAAACCACTCTATTCAACGCATCTTTATTTTGGTACAGGTTCCTCATTTACTTC AGGTTGTTAAAAGAAGAATAGTGAAGAACAATCTTAGTCGCAAAAATATACTATTCAGGGACCATTTCACCTGTCAGTAA GTGCTCTGCATTAAACTTTGATTTCTAATAGATTTAAACGTTTTCAATTATGTCATTCAACAAAACACATCCCTGTAGTT ATATATTCTTTAGATGGTATTGTCAATCAAGATTATGACTAGCTCACTACTTAAGGAAATTTGAGGATCTTCACATTTCT CTGACCACTCAGAGTCTGAGATTAGTAAGAATTAGGATCCTATTGCACTAGGACATACAAGATTCAATGATGTCTTGTGA CTGGAATAGTTTTCAGCTGCAACTTTAGATCAGATTTTCTTTTAAGATTCGTGCTTGAGAAAGAAAGTGAAGGAAAGCGT AAGAAAAGGAGAGTGTAGACTGTAGAAAGATAGAAACCATAGTGAATTCTCTGTAGATTTGAGTAATTTTCATTCTCTAT TAACTCTGACAGTTATAGTATTTATAGAGTTAAGTGAGAACAGTTGGAAACAACTGCGCAACTAACACCTAAGTCTGTTA AAAAAGAGAGTGAGAAACAATTAACTGTTCTATTGTTAGAAACATAAACAGGATGGTTGGCGACTTCAAACAGGACATTG TATTATGTGGATGGATGGCCTCCATGGTGTTTAGTGTTAAAAAATTATTCAGGCATGAGGCTTGCAAACTGAGCAAGACC AACATTATGATAGGTTGAAATGCATACTCCTAGTAAATTCCTGACTGGCCGCCCTTTCAGTGGTGCAATTTAAGCTAAAG CTCACACTGTGTTAATATAAGTAAGGTGTTGACTTCCTAAAAGTTGATGTGAAAAAAGAAAGGAAAAAAAAAAATCATTT GTGGTTTGTGGGGGACATGAGGATATGAAAGGATCCCCTTCTAGGCTTCTATTTTCCATTCGATCTTTGAAGTTTAAACA TTTCGTCGAGCTTTGGTTGACAGAACTATCACCTTATCGAGTTGAAATTTACTTTTGATGGGATATGTATTTTTGAGTGA AATCTTTAATTTTCTTTCCTAATCTGTACTTTGGGACAGCAAGATTAGTTCACTTCATAATTTATGAGAATTGGCATCTC TATGCCCTAAGTGATTGAACATTAAGATTGTAGTTTAGACTTTGTTTACGTATATGGATATAGGTGGATTTATGTGTTTT TTTACTTTTTTTATGTCCTTAATAGTTTTGGTTGGGACCTTGCATCAGATTTAATGCAGGTTTAACAAAGAGCGAAAGAT CCTTTACAATTGACTTTGTTGCTTCTGTAGTTGATAACTGTATATATTGATACAACAAATCCAAGATCCCTTCTCATAAT TTCATGGTTGTCGAGTAATTATCACAAAAGAAATAGTTTCTTGGTTTTTATCTTTCATTATTATCTTCTATGAACCAGAA AGAAGCATTGGGATTCAATGATGGTCTTGTGTTTTCAACTTTCAAGTGATTACTTTAGTTGAGATACAAGTCCTTGCACT GACATGAGATGCCCCCTCAACAGGTATTGCTCTTCGCGTGAGAATTTGACCATTGATCACGTGGTGCCTGCTGCACTAGG TGGAGAATGGACATGGGAAAATCTAGTAAGACAATATTTTTCTCATATAGAAAATACTTACTACTTGATATTTTTCTAAA ATTTAGCATGCATGATCATTAGGATACAAGTAGCTGTCATGAACACACTTTAAATGGGTTATTGCCTTATTGGCATTTCG TACGTGTATATTTGTCATGGATCTTCATTTATAGAACCTTTCCCCATAGATTTTCCTGGAAAATCAGCAGTTGAGTTTTA TCGAAGGTGTTTGATGCATAATTCAGTTGTCTGCACATGAGGCTGAAGAACAAAATTACAAACACAGAGAAGGCTTATGA AAATCTCTATATATAAATAGCTCAAGATTTATAGGAAATACTATAAATCAACAAATGACCGTCAATTGTCTCTTCTCTGG CAGGGTAACCCAAATTATCATTTTTCAGGGTTCATTCTATTTTGTTTCCAAAAAAGTACCACGTGTTTGTGATGGAAGAA AAAAAATCTAGCTAATTGTGGGTACTTGGTTGGACTTCAAGCTGACTATAAAGCTCAATTATGATTTGATACATGATTAT GCAAGTAGAAATAGAAAGCTTCTATTAACATGGTTAAAAAAGGAACTTGACCTTTAAGAATGCATAAAATAGGTATTCAG TTTGATATCAATTCTAGAATCTTAATTATAATTACTGCTCACTCCATTTCTTTTTACTAATTACTACCGTGACCGTGATT ATCAAGAGTAGAGGACACCTAGTTACAAATGAAAAGTTTCTTCTGGATAAGTTTTTAACTGATTGAAAGGGGAGGAAAGA GATTTGTGAGAGTGAGTCTGAAGTCCTTCTTTCTCTTGATAATAGAACTCCTGTGCAGTTAGAACTTGGGAAAATACTGA TTGACATGAGAGATCCCTGTGAAAAACTGATCAATTCTTTCTTGAGCTTTAAAATGTGTGGCCATTGTGTTACTGAAAAT GTTCTTGAAGATCATTCCAAATTTCAACTGTAGTGGAATAGATGACGCTAGAAGTGATTTTAATAGGTACCCGGAGCTAG TTAGCAGTTTAGTTAGTTAGTTGAGGTAGTTTTAGTTAGTTTGGGAGAGTTACTTAGACAGTGTGTGAGAATGTTATAAA TAAGAGAACTTAGAGAGAAATAGCATCTTTTGGGATCATTATTATTGGGAATTGGGAGAGACCAGGTTCTGTCGAATAAC CTGAAAATTCATACTGTTACTTCAATAAAATCAGTCTACTTTCTTCTTCAATAGCTGGTACCTATCAGATTTCGGTGGAA ATGGAATTGAGTTGCCAAGAAGCAACAATATGATTGTCCCTCTGCCCATGCCAGACGGCAGAAGCAGTTGAATATCAGAA TTTCCTGGTCAAACAATGGAACCATCTGCAAAACCATTTTTGTTCTATGCAATCAAAGCCATACACATGGAAAGACACCA GAAACTGGAGTTTTCACCTTGAGTTGTTGAGATACAAAAATCAATTCCAGGTTATCAGAGGAGTGAAGAAGAAAGGACCT GAAGCATCATCCATTGCATTGAAAGCAGCCAGTGATGAGGGAAGGACAAAGCTGGAAAGGAATAGAAGAGAATGCAGAGA AAACTAGGAAACTTTTTATACTATGTTTAGCCAGTGAGGTGAGAAATTGGAGGAAGAGTGAACTGGTTTATTAATCAATA GTACTGCATGTATGCACCAGATGCGCTAAACTAAATAAGTTACAAAACAGAAACTTTACCCTAACTAACTGATTCCTATT AATTTAAGAGTAAAGTACACTCACCCCCCTTAAGGTTTGTTAGAATTACACTCCACCCCATTCTTATCTAAAATCTACAT CCCACCCCATTTTATATAGAGGCAAATTTAGTGACGAAAAATATTTTTCATTAATAATTAGTTATTATTTAAATTGTTAA TCAATAATTTCAAAAAAAAAATCAATATAATCCAATAAATTTAAAAATGAAAACATCACAATCCTCCTCATTCTCTCAAT CGCGTTTTTCCTCCGTAAATTCATAATGCAAATTATGCAATAGCACACCTGCCCGATTTACAAACCATATCTCGAACATA GTGAAACATGCTTGTGTTTTCATATTTGGTAATAATTCAATTTTAATCAAAATAATCTCTTTATACCTCCAATTTTCAAA ATTGGGTTGTAGGCCAAAAAAGCAACACAAATGGGTGAAAAAAATAGAGAAACAAAATTATGAAAATATGAAGTGGATCT GAGGTTATTAGAGCCCAACGAGGCGGTGGAGCATCGTTTTTAACAAAATCCAACAATATCTAAGACCAACAGAGCGTTCG CTCACAACTTCAAGGGGTGAAATTCACAAGAAGTAGTTGAACAAGTGGCTTTAGGGATGTGCGATTCACGTTCTGGGGTT CAGGTTGCAACAAAACTTTGAGGCATGGAGGTGCCATGGGGTTTCACATTGTGGGACAGTGGAGCCGTGTTAAAGGGAGT AAAGGCTTGGTGGTGGCCGTTTGTGGTGAGAAATATGATTTGGAGATAGATGGGACGTGGACTTAACAGACAGAGTGAAT GGTTTTTTTAAATTTAATTCAGTAAAATTATTTTCATAAATTAATGTATGATAGTGTATATGCATTAAATTTATTTAAAT TTTTACTAATTAGTAATTAGTTTTTAGTAGTGAGGAATTTGTTTTCGTCACTAAAATTTGCCTTTATAAAAAATGGGGTG GAGTGTAGATTTTTAAAAAGAATGGGGTGGAGTGTCATTCTTGCAAATCTTGAGGGGGGTGAGTGTATTTTACTCTTAAT TTAACTACCATTTAACTAATCCACAATAGTATTTAATTGTGACAGGTGACTGCTTGTGCCAAATGCAACTCAAAGAAAGG TAAAAAATCTTTAGAGGAGGCAAAAATGAAGTTGAACAAAGTTCCAAAGGTACTGCAAACTTGACAAACTACAAAGCATA TGCTTTCCTCATATGATGTCTTGGCATAAAAGGGCAATGCTAAAATCCAACCTTAAATTACATTTAAAATTGGAGCATAT TACTGCATATTTTAACATACTCTTGAATTTTTAATGTTTCCTTTTTTATGATTGAGAAGAATCTTACACTTTTTATTCAG GCCCCAAAGGAGTATGACATTCTTGCTATACCTCTAACTGCCGCAGCACTTAGAATGCTGTCAAAAAGAAAGGGGACACC TGAAGAATGGCGTCAGTATCTAAGGTCCTCTTAAGATCCATGATTTAATCTCTGGTGGTGGTTGTGCACTCCTGTATGTC ATGTCATGCACAATATAAATCTTCCTCCTCCTTGCACAGAAAAAAATGAAGAAAAATATTGCTCTTAACCTTTAGGTTAT AGTAAGTAACTTCAATTGAATAATGAAAAGTTCATTGTAAACAGTGCTGTTCAATCTCAGGGATTGTGTATAATTTCTGT ATAGTCATTTCTGGTCTAATGTATGTCTTAACCTGGACCTGGCCTTTAAACTGATTGTTGGTACATGAATTGGTATGTGG TAGTCTTGGTGGAATGTATAGAACTGATATTTTACTAATCTATCCTCTGAATTTACCCCATATCCATCTTGTTTCCATAC CCTTATGACTTAGAACTAAGAACTAGGTTCCCCAGTCATCATAGATTGGATGTTGGGTTATGTAGGAGTTTGTTGCAATG TATAATATTGAATGAGGTAGATAAGAGGAAAGTTTCTCAAAACAACTTTCATTCCCAAATTCCACATGAATTAAAATTTT CCATTTTTTTTTAATGCAACTTCATTAGACATTAATCAAGAATAAACAGGGTCAATGCATCATTTTGAATGGAATACAAA AGACCCAGAGAGACCTCTTCCACCCAAACTACATTTGGGGAGGTAAAAGATTTCCGACTTAAAAAGTCAGCAACTCAATT GTCA
CDS sequence (LotjaGi1g1v0641100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAGAACAAGGATATAATGGCTTAGAAGAAGGGAGCCCATTGCAATTGGTGAACCCCACTGTTCCCACTATTCA GAATATTGTGTCCACAGTGAACTTGGATTGTGCCTTGGATCTTAAGAAGATTGCACAACAAGCTCGCAATGCTGAATACA ATCCCAAGCGTTTTTCTGCTGTCATCATGAGGATAAGGGAACCAAAAACAACAGCTTTGATATTTGCTTCTGGAAAGATG GTCTGCACAGGTGCTAAAAATGAACAACAGTCAAAACTTGCAGCAAGAAAGTATGCTAGAATTATCCAAAAGCTTGGATT TCCAGCTGCCAAATTTAAGGACTTCAGAATTCAGAATATTGTTGCCTCCTGTGATGTTAAGTACACTCTCGGACTTGAAC TTCTAGCGTTCGAACTACGCCCCTTTTCAACTTATGAGCCAGAAATATTTCCTGGCTTAATATATCGCATGAAGCAGCCA AACATTGTTTTCCTCATATTTGTGTCTGGAAAAATTGTGCTTACTGGAGCCAAGGCAAGAGAGGAGATATACACAGCTTA TGAGAAGATGCATCCTGTTCTTGCAAGGTTTAGGAAAATTCTGAAATGA
Protein sequence (LotjaGi1g1v0641100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEEQGYNGLEEGSPLQLVNPTVPTIQNIVSTVNLDCALDLKKIAQQARNAEYNPKRFSAVIMRIREPKTTALIFASGKM VCTGAKNEQQSKLAARKYARIIQKLGFPAAKFKDFRIQNIVASCDVKYTLGLELLAFELRPFSTYEPEIFPGLIYRMKQP NIVFLIFVSGKIVLTGAKAREEIYTAYEKMHPVLARFRKILK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 199 | 181 | 8.9E-125 | – | |
| PANTHER | 19 | 199 | 181 | 8.9E-125 | ||
| SUPERFAMILY | 20 | 108 | 89 | 1.73E-32 | – | |
| Hamap | 20 | 200 | 181 | 29.077 | ||
| CDD | 23 | 197 | 175 | 8.23034E-113 | ||
| Pfam | 24 | 104 | 81 | 8.8E-34 | ||
| PRINTS | 26 | 41 | 16 | 2.4E-61 | ||
| Gene3D | 31 | 113 | 83 | 1.8E-41 | ||
| PRINTS | 50 | 69 | 20 | 2.4E-61 | ||
| PRINTS | 69 | 87 | 19 | 2.4E-61 | ||
| SUPERFAMILY | 111 | 199 | 89 | 3.93E-29 | – | |
| Gene3D | 114 | 200 | 87 | 2.4E-35 | ||
| Pfam | 114 | 196 | 83 | 2.8E-29 | ||
| PRINTS | 117 | 133 | 17 | 2.4E-61 | ||
| PRINTS | 141 | 156 | 16 | 2.4E-61 | ||
| PRINTS | 160 | 176 | 17 | 2.4E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | DNA-templated transcription, initiation | Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription. |
Expression pattern of LotjaGi1g1v0641100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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