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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000814
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.230s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2450170.1
n.a. PREDICTED: TATA-box-binding protein-like [Glycine max] gi|356571702|ref|XP_003554013.1| chr1 28643971 28646272 +
4 domain predictions
2 GO terms
Lj1g3v2461240.1
n.a. n.a. chr1 28678804 28681305 -
4 domain predictions
2 GO terms
Lj3g3v1411740.1
n.a. TATA-box-binding protein [Glycine max] gi|351727953|ref|NP_001238202.1| chr3 18244703 18250598 -
5 domain predictions
2 GO terms
LotjaGi1g1v0454200.1
n.a. TATA-box-binding protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|Q42808|TBP_SOYBN TATA-box-binding protein; TrEMBL-Plants: tr|I3SW52|I3SW52_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0454200 LjG1.1_chr1 95524644 95529349 +
5 domain predictions
2 GO terms
LotjaGi1g1v0454200.2
n.a. TATA-box-binding protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|Q42808|TBP_SOYBN TATA-box-binding protein; TrEMBL-Plants: tr|A0A151U2X0|A0A151U2X0_CAJCA TATA-box-binding protein; Found in the gene: LotjaGi1g1v0454200 LjG1.1_chr1 95525239 95528275 +
5 domain predictions
2 GO terms
LotjaGi1g1v0641100.2
n.a. TATA-box binding family protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|P50158|TBP1_MAIZE TATA-box-binding protein 1; TrEMBL-Plants: tr|A0A1D6KZ57|A0A1D6KZ57_MAIZE Uncharacterized protein; Found in the gene: LotjaGi1g1v0641100 LjG1.1_chr1 119818234 119829277 -
5 domain predictions
2 GO terms
LotjaGi3g1v0094100.1
n.a. TATA-box-binding protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|Q42808|TBP_SOYBN TATA-box-binding protein; TrEMBL-Plants: tr|K7MHA4|K7MHA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0094100 LjG1.1_chr3 11556554 11562683 -
5 domain predictions
2 GO terms
LotjaGi3g1v0094100.2
n.a. TATA-box-binding protein; TAIR: AT1G55520.1 TATA binding protein 2; Swiss-Prot: sp|Q42808|TBP_SOYBN TATA-box-binding protein; TrEMBL-Plants: tr|K7MHA4|K7MHA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0094100 LjG1.1_chr3 11557218 11562125 -
5 domain predictions
2 GO terms
LotjaGi3g1v0094100.3
n.a. TATA-box-binding protein; TAIR: AT3G13445.2 TATA binding protein 1; Swiss-Prot: sp|Q42808|TBP_SOYBN TATA-box-binding protein; TrEMBL-Plants: tr|K7MHA4|K7MHA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0094100 LjG1.1_chr3 11557436 11562125 -
4 domain predictions
2 GO terms