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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0642600 |
| Transcript ID | LotjaGi1g1v0642600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G03940.1 Protein kinase family protein; Swiss-Prot: sp|Q852L0|HD16N_ORYSJ Casein kinase 1-like protein HD16; TrEMBL-Plants: tr|A0A151T9R1|A0A151T9R1_CAJCA Casein kinase I isoform delta; Found in the gene: LotjaGi1g1v0642600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:119984142..119990997) extracted from Lotus japonicus Gifu genome v1.2.
GTACATTCTTTTGGTTGTGTGGTGGTGGAGTATATTTTGCTGAAAGTAGAATCCTTTTACTTGGTATATCTACTGCTTTT TCGCAATGCTACTTTCTTTGTGTTGATATCCGAGTGACTGCAAACTGGGGCTAGCTAGCTCCATAGATATTTTTGAACCT GCTTTTACGATGATGATATGGAGTTTTGGCTCTGGTTGCTGACGATGTTTCTCAATTAGTGCTTTGAACTCATTTGTTTA TTTGATTTTGGTTTTTTCGTTGCAGATGATTTTTGCCGTTTTCGGGGTTTGTTTAAGTGGGCTATGATTTGAATGGGGAG AGGATGCCAGAGTTGAGGAGTGGAGCTAGAAGGTCGAAGCGGCTTGGAGATCTTCAGACCGGTCCACTACCTGCTGATCA AGGAGAGAATTGGGCACAGCCTGCTCAAAACAGGACGACTAGGAGGAGAGTTGGAGGTGGTAGAGGAAGAGGCGGTAATG CCACAGCTGTAGGTAAAGGGCCTTCACCAGCTGTACCAACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTG GTTGATCTAGATCCTGAACCTTGTGAATTCCTTCCAGAACCTGTTGCTTTAGGGGTTCCGGAACCCGGTTACAATAACGT AGAAGTTGTGGCCAATAATAATATTGCTATGGAGGGTGGAAGTGGAGAGAAGGTGGTGGCAGCCGAAGAAGAAGCAAGCA CAGCCCCAGTCCCTGAGAGGGTATATTCCGTATTGCATGTTGCTTCTCATGGATATTATAAGTGCCGTTCCAAGTATTAT TGTGTTTGGTTTCATCACGTGATGTTACTAGTTTTGGTAGCAATAATCATGACTGCAATCTTCTTTAGTTTTTTGATACG CTGGGGCTTGGTCTAGTAGTTAATGCCATTTAATGCGTTTCGTCAGCGTTACAGTTTTTCATTGATGTGTCGGACTTGAT ATTAGTAGGCTGCTCTGGAAATTTGACATGTGATGGTGATTTTGATTTTTTTTTCTTCGTATTTTTAAAATGTTGTTCAG TTTTGGCTCATTCCATGTATTTTCTAGACTGCATTGCAGTTTATATATATTTGGCAGTATCTAATTATAGGTTAATACTC TAATTGGTGCAGGTTCAAGTTGGTAACTCTCCTGTATATAAGATAGAAAAGAAGTTGGGTAAGGGTGGTTTTGGTCAAGT TTATGTTGGCAGAAGGGTTAGCGGCGGTTCGACTGATCGAACTGGTCCTGACGCAATTGAGGTATTACTCAAATTCAATC TCTATTTATGGGTTGAATGAAATATTAATGACGCTATATGGAATGATGCATTAATTTTTCTTATTTTGACCAGTGTTGTC AAATAGCGGTTCTAGCAGCGCTCTAGCGTAGTGCTCTGGGGGCTCATCGCTATTTTCCGCTGTTGTCCGCTATTTTCCGC TATGAGGGCTTAAAATAGCGGATTTTTGGCTTTCCGCGATTAACAACACTGATTTTGACTCTGTTTACAGGTTGCACTCA AGTTTGAGCATAGAAATAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAGGTGAGTAATCAGTCCC TTGTCTAACCAAGAATACATTTTTTTAAGCTTCTAAGCATTTTAATTTTATCATCTAATTCTCACTTTTGTATTTTTGTC ATTCCTAAGTACTCTGAATGGTTGCTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTATATTTTGG TGAGATATGGGTTGTAGTTCCTATATCCTGATATGATGACTTGCTCTTTGTTGTCTAACAATTTTTTATTTATTACAGGT CATGGACATGCTTGGGCCCAGTCTTTGGGATATGTGGAATAATCTTGGCCAGTCGTAAGATTTGGATTCACCTTTCATTT ATCTTCTTGCTATTCCAATTTGGCTCCATTAACTTCTTATTATTTGGGCAGGATGTCGCCAAGTATGGTTGCGTGCATTG CTGTGGAAGCAATATCAATTCTTGAGAAGCTCCATTTGAAAGGGTAATTCCATTGAATAAAATTCAGTCCCGTCAATTGT GATGTTCCCATTTATTTTGAGAAAGTTATGATTGATTGCCTTTAATGAATGAAATTCATATCATTGAATCAGGTTTGTGC ACGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGATCGGCTGATGAGAAGAAGTTATATCTTATTGATCTT GGCTTGGGTATGTTGTCCTTTAAAACCGGTTATTGTTGCTTTTACTTTGAGTCAGTGTTGTCAAATAGCGGTTATAGCGT AGCGCTCTGAGGGCTCACGCTACGGAGCTATTTTCTGCTTTGAAGGCCTGAAATAGCGGATTTTTGGCTTTTCACTATTC ATCACGATCCGTGATTAACAACACTGCTTTGAGTTATTGGTCTACCTCACCACACGTTAATTGGAGTTACATGATATATT GTAGTGCATTAATTTCCATACCTTGCATTGTCTTCAGCTTCTAAATGGAAGGATGCGTCAACTGGTCAACATGTTGAATA TGATCAGAGACCCGATATATTCAGGTTTGTAAACGTCATGTGTACTAATAATGACCATTTTTTGTTTTTACACATTAATA ACATGCCTTCTGTGCAGGGGAACAATAAGGTATGCTAGTGTACATGCTCATTTAGGTAGGACTGGAAGTCGAAGGGATGA TCTTGAGTCACTGGCATACACGCTAATATTTCTCATAAAAGGGAGATTACCATGGCAGGGTTATCAGGTCCGTTTTGCAG TATCTCTTTATGTAAAGGTTCTTGCTTTTCAAAGGTTTCATTTTGCGTGATGTAATTTTTCTCTTCCCCCCACCCCCCCA ATCTACAGGGCGACAACAAAAGTTTTCTTGTTTGTAAGAAAAAGATGTCCACTTCTCCAGAGTTGATGTGCTGCTTTTGT CCCGCTCCATTTAAGCATTTCTTAGAAGCAGTCACTAACATGAGATTTGATGAAGAGCCAAATTATTCCAAGCTTATATC AATTTTTGACAGCTTGATTGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTAAAGGTTGATTTAATTG GTTTTGCATATTTATTTTAAGTTATTAATGTCTCGTTATTTTTATTGATTTTGTTGGTTATCTGAAATGAATAAAAACTC TTTCTGTAAATAGGTCGGTCAAAAGCGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAGAAAGTGA GATTGGGGAGTCCTGCTACTCAATGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGGTAATTAACATATCCT CTTCAATATGGCATGGTCTTGGATGATTATGTTCTGCACAGTAGAAATATTCTTGCTTTAGTGTCAGAGTGGGTGAATGA TGCTTTGATTGAATAGTTCTTTTTGAGAAAGGATAAGGATGGAGATTTTGTAACTGATAGCTTCAAAATGTTTGTCCCAG AATTTCATCATTATGTGTATATATGATTCTGTTACTTGTATAAATCAGTTTTAATGGCACTTATAATGAGATTGCTGATT TTCAAACTTGTTCAATTGATGTACCTGATCAGCTATTTATAGATTCTGGTCTGTCTCAAATGTGTTTATATAGTTGGACT TATCCTGTGACTGTTCTTGTCAAAAGTAGTTCTAAACAATGCAGTAATCCTTTGTAATTACTAGTGCAGGAGTTGTTTTA AAGGAGTATACACATTGCCCACTATATGCATTAGCTTATTTATTTAGAAACTAGTGTTTATTGCTTGGTCTTAAATAACA TTTTATTTGGTTGCAGATATCACTATAATGTTGCGGACAATAGGCTCCGGCAGCATGTAGACAAGGGTATTGTTGATGGC TTGTACATAAGCTGTGTGGCATCTTCAGCGAATTTGTGGGCCCTGATCATGGATGCCGGGACAGGTTTTTCCGCACAGGT TTATGAGTTATCGCCAGCCTTTCTACATAAGGTAGGCTTTCTTTACTCTCTGATTTATATATTTCATTTTCTATGGAGCC AATGTGGAGTGGAATAATTGATGTATGGCTGTTTATTTGTTTATTATTTTTAGGATTGGATTATGGAGCAATGGGAGAAA AATTTCTATATCAGTTCAATAGCTGGTGCAGTGAACGGAAGTTCCTTGGTTGTCATGTCCAAAGGTTTCACCATTACACT CTTTTATAATGTTTAGTTTTATGACCTACTCCACTCCTCTTTTCAAATATTTTATGCCATTTTTATATACTATTTACTTA CATAGAAAGGGCTTTATTATACCATGCCATCATTGTGACCATCCCCTTTGCTATTCATTCTTGATTGATAAATACTTTTT CTTTCCTATTTTAAAAAAAAATTATGATGTTTTTTGTTCACATTATGGTTGCCATGCCATTGACCGAGACCGCATAACTG CACAGCATAGATGCAAGAGTTAGTCATTTTTAATACCAATTTAAACTTAATCTTGTATAGGTTTTTGTGGAATTATAAAG CATTTTAAAAGATGAAGTGTGTGTTTGTATTGAAGTTATGTTAAAACTTAAAAGTAAAAGTCCTTTTTGTATATGAGACT TATGTGTTGCTTTGGAAAAATATGCATTGGAAAGTGTGCTAACCACTTTCAAAACTTCACCAAATACACTGGAAGTGATT CTCTCCATGGCATGCTCATTCTGTTCTTCCCATATATATGCTTCTCAACTGGGACATAATAATTGGGTTGCATTTTGCAT GTAGGTAGAACCGAAGTGAATGACCTGTTTTGTTTAGTTTGCTTTGGTTCACTTCTATCCTCTTAGGTGGAACCAGAACC AACATATGCGAGTTTCCCATTCTACTGTTACTATGCATCATATATGGACAGAACATATGTTTTATTCTGTTCTGTTCAAT TTTATCTACCAAATTCTTTCTTAGATTGGTGAATTTCTAGGCTAGTCTTGGCATCATCCTATGAGACAACATTTCCTTGC AAACTACCTAGTTATAGGTGATGACAAAAGAAACTTTTGAATTATTTTATCAGTAGAGTTTCTTATGTGTTTCCTTTAAC ATCTGGAATGAAAGAAACATTAACTTTCTTCGATATATATAGCTTGCTGAGCTGCTGTTTATTAACTCATGTTATTATCC TTGCCTTGTAGGAACTCCTTACACACAGCAGTCCTACAAAGTAAGCGAATCATTTCCCTTCAAATGGATAAACAAGAAGT GGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCACTCGCTGGGGTGTTGTTATGTCTAGGAATGCTGGGTTC TCTGATCAGGTGCGTTATTTTCTTGAGTTCTGGTCATTTATGATTCTTTAAATATGACCTCCATTGTTGAACATGCATGC TTTTCATTTGATGATGCAAGGTTGTGGAGCTTGACTTTTTATACCCAAGTGAAGGAATTCATCGACGGTGGGAGAATGGT TACCGAATTACTTCTATGGCTGCTACTAATGACCAGGCAGCCTTCATTCTGAGCATACCTAAACGCAAATTGCTTGATGA AACTCAAGAGACTCTGCGTACATCTGCTTTCCCCAGTACCCATGTAAAGGTATTTGCATTTCTTGTGTCCTACTACATTT TGGGCTATACGTAGTTTTAGTATGCGTGCTAGTGTTAGGAACCCTTGTTTTGGTTTTTTACTTTTTAATATAATAATTAG GCCATCCTAACTGAAGATTTGGTGAGTACTGATAGGTTTGTGATTGAGAACTATCTATCATACCTTAATAAGGAATTGAA AATCCTTAATTACTATGATTTAATATTCTACTTGTCTGCCAAAAGGAATTTGAAAAATCCTGACAGTCCTCTGTTCTGTG GCGTGCCCCTGGCCAACTGCTATTTTCTTTCTCATTTTCCCCTCATAAGTTAACCTATAAACATAATAACATCTAACTTG ATGGTATTTTTTACCCCATCTTCTGTGATTATATGTTAAGTAGACTTAACTGAGGATATGGATGAGTATGATAGCTTGTG GTTGAGAATGATCAGGTCACACCTTGAAAACGAAAAATTAATTAATATTTTTGTAATTCAAACTCATTCTAAATGCCAAA ATGAAACATAACTAAAATGTAACATGAGTTTTGGCTGCGCACTGCTGTTGTTTCTCCCGTTTTTCTTTTCTTTTCATGGT ATTAATCTCTAATTTGATGGATTTGCAGGAGAAATGGTCGAAAAACCTCTATATTGCCTCAATATGTTATGGGCGAACTG TTTGCTAGCTTCCGCAGTGAACATTTGCTATATCCTCTGAAGAAAGAGGCAAAATTAGAAAGATGAGAGGATTTCCGTGA TTTGGAATAGGTGGGTTTGGTTTTGCCCCCAGACCCAGTCACTGAGGAAAATCCCTCTCATATAAGAGTTTTGTTATAAT TGTATAAAAATGAGAAGGGTAATGGAGAAACAGGTGTGAGCTATGCTGTGTGAGAGCATGTTCCCCTACCAACCCCAGCC AATGGTAGCAATGATTTGGTGGGCATTAACTTGTTACCTGGGCTGGCTATTTTGGCCATGTATCATGGTTGTGCTTTAAC AATTTGCGATTTTGTATGTAATGATATAAAATTTTACCAACATCATAAACATAAAACAACGAATTTTAAGATATGATGAT TTCTAGATTTGAAGACTAATTTATTCGAAGTCCTGGACTAGTGGGAGGTCAGGATTTAAATTTCATTCGATGGAGGGTTT TCTCAAAGGCCTTTTAGTTTGATTGTTACCATATTTTTATCATATCAAGTTTTGCA
CDS sequence (LotjaGi1g1v0642600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGAGTTGAGGAGTGGAGCTAGAAGGTCGAAGCGGCTTGGAGATCTTCAGACCGGTCCACTACCTGCTGATCAAGG AGAGAATTGGGCACAGCCTGCTCAAAACAGGACGACTAGGAGGAGAGTTGGAGGTGGTAGAGGAAGAGGCGGTAATGCCA CAGCTGTAGGTAAAGGGCCTTCACCAGCTGTACCAACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGGTT GATCTAGATCCTGAACCTTGTGAATTCCTTCCAGAACCTGTTGCTTTAGGGGTTCCGGAACCCGGTTACAATAACGTAGA AGTTGTGGCCAATAATAATATTGCTATGGAGGGTGGAAGTGGAGAGAAGGTGGTGGCAGCCGAAGAAGAAGCAAGCACAG CCCCAGTCCCTGAGAGGGTTCAAGTTGGTAACTCTCCTGTATATAAGATAGAAAAGAAGTTGGGTAAGGGTGGTTTTGGT CAAGTTTATGTTGGCAGAAGGGTTAGCGGCGGTTCGACTGATCGAACTGGTCCTGACGCAATTGAGGTTGCACTCAAGTT TGAGCATAGAAATAGTAAAGGTTGTAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAGTACTCTGAATGGTTGCTATG GCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTATATTTTGGTCATGGACATGCTTGGGCCCAGTCTTTGG GATATGTGGAATAATCTTGGCCAGTCGATGTCGCCAAGTATGGTTGCGTGCATTGCTGTGGAAGCAATATCAATTCTTGA GAAGCTCCATTTGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGATCGGCTGATG AGAAGAAGTTATATCTTATTGATCTTGGCTTGGCTTCTAAATGGAAGGATGCGTCAACTGGTCAACATGTTGAATATGAT CAGAGACCCGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCTCATTTAGGTAGGACTGGAAGTCGAAGGGA TGATCTTGAGTCACTGGCATACACGCTAATATTTCTCATAAAAGGGAGATTACCATGGCAGGGTTATCAGGGCGACAACA AAAGTTTTCTTGTTTGTAAGAAAAAGATGTCCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCCGCTCCATTTAAGCAT TTCTTAGAAGCAGTCACTAACATGAGATTTGATGAAGAGCCAAATTATTCCAAGCTTATATCAATTTTTGACAGCTTGAT TGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTAAAGGTCGGTCAAAAGCGAGGAAGGATGCTTATAA ATCTGGAAGAAGATGAGCAGCCTAAGAAGAAAGTGAGATTGGGGAGTCCTGCTACTCAATGGATATCAGTGTATAATGCA CGCCGTCCCATGAAGCAGAGATATCACTATAATGTTGCGGACAATAGGCTCCGGCAGCATGTAGACAAGGGTATTGTTGA TGGCTTGTACATAAGCTGTGTGGCATCTTCAGCGAATTTGTGGGCCCTGATCATGGATGCCGGGACAGGTTTTTCCGCAC AGGTTTATGAGTTATCGCCAGCCTTTCTACATAAGGATTGGATTATGGAGCAATGGGAGAAAAATTTCTATATCAGTTCA ATAGCTGGTGCAGTGAACGGAAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAGTCCTACAAAGTAAG CGAATCATTTCCCTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCACTC GCTGGGGTGTTGTTATGTCTAGGAATGCTGGGTTCTCTGATCAGGTTGTGGAGCTTGACTTTTTATACCCAAGTGAAGGA ATTCATCGACGGTGGGAGAATGGTTACCGAATTACTTCTATGGCTGCTACTAATGACCAGGCAGCCTTCATTCTGAGCAT ACCTAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGTACATCTGCTTTCCCCAGTACCCATGTAAAGGAGAAAT GGTCGAAAAACCTCTATATTGCCTCAATATGTTATGGGCGAACTGTTTGCTAG
Protein sequence (LotjaGi1g1v0642600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPELRSGARRSKRLGDLQTGPLPADQGENWAQPAQNRTTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLV DLDPEPCEFLPEPVALGVPEPGYNNVEVVANNNIAMEGGSGEKVVAAEEEASTAPVPERVQVGNSPVYKIEKKLGKGGFG QVYVGRRVSGGSTDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLW DMWNNLGQSMSPSMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADEKKLYLIDLGLASKWKDASTGQHVEYD QRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKH FLEAVTNMRFDEEPNYSKLISIFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNA RRPMKQRYHYNVADNRLRQHVDKGIVDGLYISCVASSANLWALIMDAGTGFSAQVYELSPAFLHKDWIMEQWEKNFYISS IAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGTRWGVVMSRNAGFSDQVVELDFLYPSEG IHRRWENGYRITSMAATNDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 74 | 74 | - | – | |
| PANTHER | 81 | 702 | 622 | 0.0 | – | |
| PANTHER | 81 | 702 | 622 | 0.0 | – | |
| Gene3D | 116 | 477 | 362 | 4.6E-85 | – | |
| SUPERFAMILY | 148 | 436 | 289 | 9.02E-60 | ||
| ProSiteProfiles | 148 | 427 | 280 | 22.421 | ||
| Pfam | 148 | 381 | 234 | 1.9E-15 | ||
| SMART | 148 | 427 | 280 | 3.9E-11 | ||
| CDD | 148 | 423 | 276 | 1.73642E-129 | – | |
| ProSitePatterns | 154 | 186 | 33 | - | ||
| ProSitePatterns | 274 | 286 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0642600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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