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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0644500 |
| Transcript ID | LotjaGi1g1v0644500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|I1ML01|I1ML01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120173322..120179235) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACATTACTTCCATCAGTATGAAAAATGCACCAATTTTTTTTTATACATGTCCATTTCTCTTTGTCATCAGTAAAAT TAAAGCTTCCCTTGTTTCCGTGTGATCCAAAACCAAAGTATTGCAAACCAAACCAAACAATTAAAGGATGTCAACACCAA CACTTACCCATGCACTGAATCGAAACCAGTCCCAAATCAAACACTGTTGCAGAGAGATTGAGATTGACCAAATCTATTAA TGTTGCCAGGCCCAGAAGTTTCACTTACCTTATTTTATTATTAATCATGTTGCTTGCAGTCACACTGTCACAGCTTTGCA AATTAATGCAGTGTCACTATCCTTCTAGTTTTTCCTATGTTCCCTCGTGACACGCATTTGTTCAAAAATGCATTCATTTA CACACAAATGTGCCATTGACTTCTATATCATATTATATCTCCTACCCATTTCTCAAATCTCAATGCTTACACTAAAAATG TCATCTTTTTCAGCATTTGGTGATGAGTGATGCTTCATTTCATTCAAAGTCGCATTTGAGGCCAGCTTTGCTCTCCCCAT AAGCTAAAGGTAAAATCTTTTGAAGCTTTCTTGAATGGTGAATGCTTGTTTTGTTTGCTTGTGAATCTGACAGTGAGTTA ATTGCTTGAATTCAACATATGCTGTTAGTGTTAACCTAGCTAAATAGTCAATAGTGTATGTCATTGTAGTTTTGTGTAAG GGATTTTATGTTCTTTCATATTGTTTCTTCATTATTGGAGGGTCCATGTGATGCATCTGAGATTCTGAGTTCTATGCATG ATGAGGGTGGACTATGTTTGCATTGTATAGACAGAGTTTTACTAGTCAATAGTGTATTGTAGTTTGTGTAGGAATTTTGT GTTCTTTCAAATGGCTTCTTCAATATTGGAGGGTTCATGTGGAGCATATGAATTGTATGCATGATGAGAGTTTTACAAAT CCTCTTGATTTTTTTTACATTGCCAGGTTAGAGTTCAAGTATAATGGCTAAAATCCCCTTCTTATTGGTGGGGCTTTGGC TGCTAGGTAGCTGGACAAGTTTGTTGGAGGCAGAATACATGAAGTACAAGGACCCTAAACAATCAATTGATACTCGAGTT CAGGATCTTATTACCAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGATTGAGCGCAAGTATGCATCTGTTGA TGTCCTCAAGAACTATTTTATTGGTGATGATCTGTTTTTCCCTTCCTAATCAGTGGTGTGATTATTTAATTAGGCAATAA TGAAAATTTATCTTCTTTTGAGTAGGGAGTGTAATGAGTGAGGGAGGAAGTATGCCAGCTCCAAAGGCTTCTGCTGAAAA CTGGATTGATATGGTTAATGAATTTCAGAAGGGTGCTTTATCATCCCGGCTTGGAATTCCAATGTTTTATGGGATTGATG CCGTTCATGGCCACGGTACTGTTTATAAAGCAACTATTTTCCCCCACAATATTGGGCTAGGAGCTACCAGGTAAATTGAT CTTAGTAGCACTTCTTGTAAAATTTATATTCTTAGTCCTATCCCCAGTTATATTATTTGAAACATGATGATGAAACAGTT AGGCACAAGTAGTGATGGGATTAGTTACCAAAATTTGTAAAGCTGCTAAGGCATACATAGGTTTTACATGCAAAGCCGGA TCTAGAAACTAAATAGAATTATTTTCTCTGCTTTGTACAAGATTAAAAGTATGATACAAGGTTTTATGTTTAATGGACGG ATAGAGCTAGCAGGGTCATACCCAGAAAAGATTGATAAAGAGGGTGAAAATTGAACAAATTAAGCAAAATAAAAAAATGA CTAATTGGAAGAAACAAATTAAAACTTTTTAGGGAGGTGGATATAACACATGAATACTATTATATTATAAAGAAATTTTT TCTTGCGACCGCCCCATTTGCCATGAACCTAGGTCCGTCCTTGAGTGCAAGTGTGCACATCTGATAGTTTAGTTAGCACA GATTATTGTCTTACTCATTCTAGTCACAATTCCGTCATGTTATAATGGAGAATAATGGGTATTTTAATTTTGCTGATTAG GGACCCTGAACTAGTTAAGAGAATTGGAGCTGTAACTGCTCTTGAAGTTAGAGCAACAGGAATTCAATATGTTTATTCAC CTTGTGTAGCAGTAAGTAACTACAACCAACTTCTGCTTCTCCCAACTTATACTGATTTTCTTGCATTAGCTTATTCTCTT TATAGGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGCGAAGATCCTAAAGTAGTTCAAGATATGACT GAAATCATATCAGGATTGCAAAGGGACGTCCCTGATAATCTTCCAAAGGGTGTCCCTTATATTGCTGGAAAGTAAGAATT AAAAAAACAACAAAATAATTTAATTTTAAGATGATAATTCACATGTCAATTAGTTGAGTCTTGGAGTTGATATTATTGCT CTTGATTCAGTTGAATGCTTTTTGTGTTGTACAATCCCAAGAAAAAGAATTCATTCGTTTGTTTGAACTTTGTTGAAGTT TTTTTTTGGTACATCGGAAAGATTGACTTGTTGAAGTTGAAGCTTTAGAAACAATGCTGATACGTTTTGAACAGGAAAAT GTACAATTAGTTGTCTTCTTTTGTCCTTAACCCCACCCACTTCTATTCTTCATTTCTGTTTCATTCTTTATATTTATATG CATGTTTGGATACACGGCGGAAAACTACGGTAAGACCAACATCATGGTGGGCAGTCACAAAAGCCAAGGGAAGTTGCTTC TGTCTACCTTGATTTTGGCTTTACCGTGGTTTTCCACCATGTAGCCAAACATACACTACATCAGCTACTAGGATAAAGTA GGCCAAATCATTGAAAAGGATTATCAAATAAAAACCTGAAAGCAAGAGATGAAGGACTTTGTTCCCTAAATTAATATGCT GTTCATGTTAGGTTGCACCATACCACAAAATACTGCGTTAAACTTATTGATTTTGGTTTAGTTAGTATTATGTTTCTGAA CTACTCATGTATTGCTGAACAGAGAAAAGGTTATAGCTTGTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGG ATTGATGGGAACAACACTGTTATAGATAGAGATGGATTAATGAGAGTTCACATGCCCGGCTACTTTAGCTCAATTAGCAA AGGTGTGGCAACCATAATGGTCTCTTACTCCAGTTGGAATGGAATAAAAATGCATACTAACCATGACATGATCACTGGCT TTCTCAAGAACACTCTGCATTTTAAGGTAAAGTAATTTGTTCATCAAATATAGCATTGGAACCCTGATATCATTGTATAT TTGCAATTTTAGATAACACCTCGCCTTTTCTTGGATTACGCCAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGA ATAACCTCTCCACCTCATGCAAACTTCACTTATTCGGTTGAAGCAGGAGTTTCTGCTGGCATTGACATGGTAGTTTAGGC CAAAAGTATATGATATTATTAAGCGAGAATTGATGTTCATCCATTGAGGACATATCTAATAGTGTTACACTTTGTTTGGA TTTGCAGTTCATGATTCCAAAGTTCTTCACAGAATTCATCAATGATCTAACCATATTGGTGAAAAATAAGCTCATTCCGA TGAGTAGAATTGATGATGCAGTGAAAAGAATTTTGTGGGTTAAGTTCATGATGGGTATTTTTGAGAACCCATTCGCTGAT TACAGCTTGGTCGGATATTTGGGGATTCAGGTTAGCTATTTTGTTTTCCTTGAGTATTTCCATTTAAGTCCGCATATGTT GTGTCATAGCCGGTCCTAAGCCCGGGTAAAGGAGGAAGTTGTGTTATGCCTGTGGCGTGGGATAAGGCTTTTGTTGTTGA TTTTCTCCATTAACTTCTCTAATTTCACAATTAGATATAAGGATAACCCTTATCTCTTCTATATTTACCAAAATTCTGAG CAGAAGCACAGAAAATTGGCTAGGGAAGCAGTAAGGAAATCACTGGTCCTTCTAAAAAATGGTATATCTGCTGAGAAGCC AATATTGCCTCTTACTAAAAAGGTACCAAAAATACTTGTAGCTGGAACCCATGCTGATAATCTAGGATATCAATGTGGTG GTTGGACCATTGAATGGCAAGGAGTCAGCGGCAACAATCATCTTGAAGGTGAGTTAACTTTAATTGTATTTCCATCATTA TAAAGAGACTAATGCAGCTCTTCTTATCTTGTGCACTTTTATATGATCAGGGACTACAATTCTCACAGCTATAAAAAACA CTGTTGATCCAGAGACCACTGTGATCTACAAGGAGAACCCTGATACTGAATTTGTCGAGTCCAATGGATTTTCTTACGCC ATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGGAAGGTGACAGCATGAACTTGACAATCCCCAGCCCTGGTCCTGA GACAATAACAAATGTTTGTGAAGCCATAACATGTGTGGTTATTATTATTTCCGGGCGCCCTCTAGTTATTGAACCGTATC TTGCTTTAATAGATGCACTTGTTGCTGGTTGGCTTCCTGGTAGTGAAGGGCAGGGTGTGGCTGATGTTCTATATGGTGAC TATGGTTTCACTGGAAAGCTTCCAAGGACATGGTTCAAAAGTGTTGATCAGCTACCAATGAATGTTGGAGATCCTCACTA TGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCCAACCTACTAAGGCCATTTACTCCGAGTAGATATCATCTTGAT CTGCATATTCGTTAAAAAATAAGAGTATGAAAGGTTGATTTTCAACATTTGGCAGGCATGCTTATTTTGGCAAGTTTTTT CTAGTGTATTTTTTTTTTCTGAAGTTTTGCTTCTTCATTTTACATTAGGATCCACATTGAAAGCTCAATTTTATTAATTC ATTAAAGACGTAAAAATTGGGTTAAACCACCCAAGCTTAGGTGTTTCAATAGTTTTATTACATGTCTTTAAAAAATTCCA AGTCAGATATTACATGTGTCATCATAAAATTCAACTCATTTTATTATTCATTATTTTTATATTTTTATCAAATTCATACT TTGAACCCATCAATTAGGATAAATTACACCATGAACATTTTTCTTAAAAGAAAAACCAAGAACCCTAATCCCCAATTTTG AATGTTACTTTCAATTTAGGATAAAAAGTCCCACCATTAATAATCACCGAAAATATCACATAAGAAATTATTCATGTTTA AAATAAATTCACTCTTAATTATTCATTTCCTGTAAAATTTCCATTGAAACTCACCGGAAATTCAAATTTCGGCCGCCGCC GCCACCTGCGTTTCTGGGCTGAATGCACAGAACTTTTTTTTTCTTTTTCCTTTTCAATTTTTAACACTCGCGTGTCTCAT CCATCATTTTGAATCTTTATATATACACCAATAGAAAATTTTAGCTGTCTTAGAATTTTGTTGTTGTGTTTGTGTTATCA AAGGTGGCTGTCTGGTTGAGGTAGAAGAAGATAGTAATTGGTTATGGCGTGAAGGACACGTTCTATATAGCCCATGGATC ACTCATGAAACAGGACATTCCTCCAATCGTGGAAGAAGGAGGTGCTTCCGCCCATACCCAATTTCATGAAACAGGACATT CAAAATTTCTCAATGATTATCAATGATTGGACTTCTGGTTCTAAATCAGAACTTTCAAAATTGGGGATTAGGGATTCTTG GTTTTTTTTAGAAAATACTTTCGATGTGTAATTTATCCTAATTGATAGGTTCAAAGTATAAATAAATTATTTAATAAAAT GAATTTGACAAAAATATAAAAAAAATGAATAATGAAATGAGTTGGATTTTATGTGACACATATAACATCAGTTG
CDS sequence (LotjaGi1g1v0644500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAAAATCCCCTTCTTATTGGTGGGGCTTTGGCTGCTAGGTAGCTGGACAAGTTTGTTGGAGGCAGAATACATGAA GTACAAGGACCCTAAACAATCAATTGATACTCGAGTTCAGGATCTTATTACCAGAATGACTCTTGAGGAGAAAATTGGTC AAATGTTGCAGATTGAGCGCAAGTATGCATCTGTTGATGTCCTCAAGAACTATTTTATTGGGAGTGTAATGAGTGAGGGA GGAAGTATGCCAGCTCCAAAGGCTTCTGCTGAAAACTGGATTGATATGGTTAATGAATTTCAGAAGGGTGCTTTATCATC CCGGCTTGGAATTCCAATGTTTTATGGGATTGATGCCGTTCATGGCCACGGTACTGTTTATAAAGCAACTATTTTCCCCC ACAATATTGGGCTAGGAGCTACCAGGGACCCTGAACTAGTTAAGAGAATTGGAGCTGTAACTGCTCTTGAAGTTAGAGCA ACAGGAATTCAATATGTTTATTCACCTTGTGTAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAG CGAAGATCCTAAAGTAGTTCAAGATATGACTGAAATCATATCAGGATTGCAAAGGGACGTCCCTGATAATCTTCCAAAGG GTGTCCCTTATATTGCTGGAAAAGAAAAGGTTATAGCTTGTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGG ATTGATGGGAACAACACTGTTATAGATAGAGATGGATTAATGAGAGTTCACATGCCCGGCTACTTTAGCTCAATTAGCAA AGGTGTGGCAACCATAATGGTCTCTTACTCCAGTTGGAATGGAATAAAAATGCATACTAACCATGACATGATCACTGGCT TTCTCAAGAACACTCTGCATTTTAAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGAATAACCTCTCCACCTCAT GCAAACTTCACTTATTCGGTTGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGATTCCAAAGTTCTTCACAGAATT CATCAATGATCTAACCATATTGGTGAAAAATAAGCTCATTCCGATGAGTAGAATTGATGATGCAGTGAAAAGAATTTTGT GGGTTAAGTTCATGATGGGTATTTTTGAGAACCCATTCGCTGATTACAGCTTGGTCGGATATTTGGGGATTCAGAAGCAC AGAAAATTGGCTAGGGAAGCAGTAAGGAAATCACTGGTCCTTCTAAAAAATGGTATATCTGCTGAGAAGCCAATATTGCC TCTTACTAAAAAGGTACCAAAAATACTTGTAGCTGGAACCCATGCTGATAATCTAGGATATCAATGTGGTGGTTGGACCA TTGAATGGCAAGGAGTCAGCGGCAACAATCATCTTGAAGGGACTACAATTCTCACAGCTATAAAAAACACTGTTGATCCA GAGACCACTGTGATCTACAAGGAGAACCCTGATACTGAATTTGTCGAGTCCAATGGATTTTCTTACGCCATAGTTGTAGT AGGAGAGCATCCTTATGCTGAAATGGAAGGTGACAGCATGAACTTGACAATCCCCAGCCCTGGTCCTGAGACAATAACAA ATGTTTGTGAAGCCATAACATGTGTGGTTATTATTATTTCCGGGCGCCCTCTAGTTATTGAACCGTATCTTGCTTTAATA GATGCACTTGTTGCTGGTTGGCTTCCTGGTAGTGAAGGGCAGGGTGTGGCTGATGTTCTATATGGTGACTATGGTTTCAC TGGAAAGCTTCCAAGGACATGGTTCAAAAGTGTTGATCAGCTACCAATGAATGTTGGAGATCCTCACTATGATCCCCTCT TCCCATTTGGGTTTGGCCTTTCTACCCAACCTACTAAGGCCATTTACTCCGAGTAG
Protein sequence (LotjaGi1g1v0644500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKIPFLLVGLWLLGSWTSLLEAEYMKYKDPKQSIDTRVQDLITRMTLEEKIGQMLQIERKYASVDVLKNYFIGSVMSEG GSMPAPKASAENWIDMVNEFQKGALSSRLGIPMFYGIDAVHGHGTVYKATIFPHNIGLGATRDPELVKRIGAVTALEVRA TGIQYVYSPCVAVCRDPRWGRCYESYSEDPKVVQDMTEIISGLQRDVPDNLPKGVPYIAGKEKVIACAKHYVGDGGTING IDGNNTVIDRDGLMRVHMPGYFSSISKGVATIMVSYSSWNGIKMHTNHDMITGFLKNTLHFKGFVISDFEGIDRITSPPH ANFTYSVEAGVSAGIDMFMIPKFFTEFINDLTILVKNKLIPMSRIDDAVKRILWVKFMMGIFENPFADYSLVGYLGIQKH RKLAREAVRKSLVLLKNGISAEKPILPLTKKVPKILVAGTHADNLGYQCGGWTIEWQGVSGNNHLEGTTILTAIKNTVDP ETTVIYKENPDTEFVESNGFSYAIVVVGEHPYAEMEGDSMNLTIPSPGPETITNVCEAITCVVIIISGRPLVIEPYLALI DALVAGWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTQPTKAIYSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Gene3D | 21 | 395 | 375 | 2.9E-147 | ||
| Phobius | 24 | 631 | 608 | - | – | |
| SUPERFAMILY | 25 | 411 | 387 | 7.79E-120 | ||
| Pfam | 47 | 373 | 327 | 9.1E-67 | ||
| PRINTS | 108 | 124 | 17 | 2.0E-23 | ||
| PRINTS | 132 | 151 | 20 | 2.0E-23 | ||
| PRINTS | 178 | 194 | 17 | 2.0E-23 | ||
| PRINTS | 224 | 240 | 17 | 2.0E-23 | ||
| PRINTS | 294 | 312 | 19 | 2.0E-23 | ||
| Gene3D | 397 | 625 | 229 | 3.8E-89 | ||
| Pfam | 412 | 621 | 210 | 3.6E-34 | ||
| SUPERFAMILY | 412 | 621 | 210 | 7.06E-58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0644500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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