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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0650200 |
| Transcript ID | LotjaGi1g1v0650200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exostosin family protein; TAIR: AT3G45400.1 exostosin family protein; Swiss-Prot: sp|Q6DBG8|ARAD1_ARATH Probable arabinosyltransferase ARAD1; TrEMBL-Plants: tr|G7L2L4|G7L2L4_MEDTR Secondary cell wall glycosyltransferase family 47 protein; Found in the gene: LotjaGi1g1v0650200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:120868823..120872637) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATCCAACAAAAGATAGAACGGACTTATATTTCATAAAAATAGGAAATAAAATAACAAAGTCAACAAAACTGAAAA AACAGTCCAAGCCAATTCAATTTGTGAGATGATTTGATATAATGGGGAAGATGAAATAGTTAGTCTTCCATTAGAATTTT TTTCTTTTTTATGGCAGTCTTCCATTACCATTAGAATTTGGCCAAGCCAACTCTTATCTTAGTGCAAATATATACATATC CAAAACGTAACGTACGTGGAGACCTCTATGCTATGAAGAACGCTTCTTCTGTTAGACCCTATTCCCACGCTTCCTTCTTC CATTCCAACTCCTATCACCTAACACAATCACACACTACTCTTCTGTCACCACTTACAATCAACAATAATCTTCATATCAT ACCCTTAATTTTCTTTAACCATTAATTATATCTTGTTTAACTTTGTTCTAATACAAGTTTTTGATGTCTACCATGGTCAT GGTTGTTTCAAATAGAGAATTTGCAAGGTAGTTCTGGTTTCATGTGTTGATCATTGCTTGGAAGAATAGAATGCAATTGC AATGTCAATTGCAGATCAGAGAAACGTGTCTGCCATCAAAGTTTTCTCTAGAAAGTCCATGTGTTGCTTCTTCACGTTGA CAACATTCCTCTTCATCACATCATGTTTATTTGTTCTTCGCTCCACCGGCTCCGACGCCGCACCGGTCTCCATTGATCAT GTTTCACAGCTTCTCCCTACCTTGAACAAGACCCAGAATGCAGAATCCTCATTTGGAAACAGAGCAATACTCGTTGACAG TGTGAAAAAAAATGCAGAACCACCAACCATTGAGAAAAACATACAACAATCATCTGGTGTGCCATGTAACAGTGACAAGA CTGCAACAACAAGTGACAGCGTTGTTTTGAAAAGTTTGAAAGTTTTCATGTATGATTTGCCTTCTGAGTTCCATTTTGGA CTATTGGATTGGAAACCTGAGGGAAACAGTGTTTGGCTTGATATGAGAATCAAGATACCTGGTTACCCTGGGGGTTTGAA TTTGCAGCATAGCATAGAGTATTGGCTTACTTTGGATATTCTAGCTTCTGAACTACCTGAATCTTCTTCTTCTAATGCAA GGACTGTGATCAGAGTTAGAAACTCTGCTGAAGCTGATATAGTGTTTGTGCCATTCTTTTCTTCTCTGTGCTATAACAGA CACTCCAAAAAGAACAAGGGTTTGCAAGAGAAGTTAGTGAGGTATTTGATGGCTCAAGAGGAATGGAAGAGGACAGGGGG GAGGGACCATTTGATCTTGGCTCACCATCCAAATAGTATGTTGGATGCTAGAATGAAGCTGTGGAATGCAACTTATATAC TCTCAGATTTTGGGAGATACCCTCCAAACATAGCTAATGTGGAGAAAGATGTGATTGCCCCTTATAAACATGTTATTCCA CTCTATGTTGATGATCACTCCACCTTTGAGAGCCGTCAAACATTGCTTTACTTCCAAGGTGCAATACACAGAAAGGATGT ATGTTCCTCTTTCTCTTTGATAACTTGGTTTTGTTGTTTCTTTAGCTTTTAAGTGAGTTAAGTCTTTAGGCCCTGAATTC ATAAGCACTGTCTTAGTTATGTTTGAGGAATTGGGGTCCTTCCTTGAGTGTCTTCTACATGTCTGCTTGGGATCCCTAAA TGTTTTCTCACGTTGCATTACATACACCAGGGCTAAAGTGCTCTGAATTTTATTTGTGCTTTCTACAAAAATCAGTATCT CATAGGAGTGTCATCATATGCCTAATAATGTGAGTAAATATTTAGTTGGGTCCCTAAAAAGGTGTTACTTGTGTAGCTTA GTTATGAACTTTCTAACAAGATCACCTTACAAAGTTTTCAACTTGCTAAAACAAGGACCAATTTGCATCAATAGAAACCT TGGGGGGGGGGGTGTCAAAGTATGTCAAGTAATAATTTGCATCAATAGTCTTTGATGGGTGCAAACTCATTCGAGAAACT GTTGCGGCCCCTCCCAACATATGACTTTCTCGGAGTTCGAACTTGTGTCCCCAAGGAATCTAGCTTGCCTACCACTACAC CAACATTATATTAGTTACTCAACAATGTTTAGTTATTTACTTAGTGAACATTCCAAAATAGGACTTAATTGATAAATGCT TGAATCTTTAAAGCAAAGTCTTGAGTTCAAGTCGTCTTATGTATGAAAAGAATCTCCTGAGACTGCTGGCCCCATCAGGA GGAAGTGGATGTTTCCGGTATTGTCTTCGATGGAGATACCTTAAAAATAGGACTTGACAATATTTCACATTTTTTACACA TAATTCTGCATAATTAAACCATAAATGGATTCTGTCAAATCAAGTTAAATTGAAAGCTCTATCTAATGCCATGGCATGTA TACAAATGCTTGTAGCCAGATTTTTACAACTGTTCTTTAAAAGGAATTTACATCACATCCACATGAATGTCTTGTAAAAA AGAGTTTGACATTTTGCAACTTTAACTTTCAGTACTTCCTTTTGCTTGTTAAACTTTAGAAAATTTCCTATGTAACTGAT TTGAGTTTTTCTCATGCTCAGGGAGGCCATGCTCGGCAAGAACTATTCAATCTTCTGAAAGATGAGAAAGATGTGCATTT TTCATTTGGGAGTGTTCAGAAAGGTGGTATCAAGAAATCCACCGACGGCATGCGTTCATCCAAATTCTGCCTCAACATAG CCGGCGACACCCCCTCATCAAACCGCTTGTTTGACGCCATTGCCAGCCACTGTGTCCCTGTCATCATCAGTGACCAAATT GAGCTTCCATACGAGGATGTCCTTGACTACTCCCAGTTCTGCATATTCATCCGTACAAGGGATGCTCTCAAAAAGAAGTT TTTGATAAACTTTATCAGGAGCATTGGGAAAGATGAGTGGACTAGAATGTGGAACAGGTTGCAAGAGGTTCAGAGTTTCT ATGAGTTTCAGTATCCATCTAAGGAGGGTGATGCTGTCCAAATGATTTGGCAGGCTGTCGCGCGTAAGGTCCCTTCCATG AAGTTGAAGATAAACAGGTCTAGGAGGTTCTTCAGGTCTCTTCATGGTAAATAGATGGGGCTCAAATTCAAATCAATGCC TGCATTAGATAACTTCTGATTAGTGAGAAAATGTTTTGCACTTCAGAGCCTTTGGATGTGATAGACTACTTTAGGTTTTG CCTTTCGAAATGCAACACTGCTACACATATATAGTGCTTATTTGAATACATGGTAAATTTTCACAGTGGAAGGATAATTG ATTTTGGGAGAAACTACTCCTAGTAGTTTTTGTGGTAGTAGAAGTGATTCTGGTAGATTAGATTTCTAGGACCTCAGATT CCATATAGCTGATGAGGAAGTTGTTTTTGTGAGTAAGTAACTTTGTAACCCTTAGGATTCAACAATTCACACAACCTGAT GATTCTAATTGTGTCTTTCACCATAATTCTTTGTGTATTTTATGTGAGTAAATGTCCATGTAGCCTTTTATTCTTACAAC ATTAGCCACAAATTTGATGAAATCAATGATTTGTTAGAATCTTTCATCAGAACATTCTTCTTAACATTAACTAACTTTGT ATATTTGGGGTTCTATTTTATTACTTAGCCAATTTGTAACTTACCCCTCACATATTTTAAATGGTACAGTTAAGTTGGAG TCATAAGCTTGAAGAGTTGAACTGTTGAAGTGCAGTGTTCACATTTTCTAATCCCAAGTATATACCACCCTCCCCCCTTC CCTACCCAAATCTCCATTATTATGAACAAATTTATCATATGACTACACTCATACT
CDS sequence (LotjaGi1g1v0650200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAATTGCAGATCAGAGAAACGTGTCTGCCATCAAAGTTTTCTCTAGAAAGTCCATGTGTTGCTTCTTCACGTTGAC AACATTCCTCTTCATCACATCATGTTTATTTGTTCTTCGCTCCACCGGCTCCGACGCCGCACCGGTCTCCATTGATCATG TTTCACAGCTTCTCCCTACCTTGAACAAGACCCAGAATGCAGAATCCTCATTTGGAAACAGAGCAATACTCGTTGACAGT GTGAAAAAAAATGCAGAACCACCAACCATTGAGAAAAACATACAACAATCATCTGGTGTGCCATGTAACAGTGACAAGAC TGCAACAACAAGTGACAGCGTTGTTTTGAAAAGTTTGAAAGTTTTCATGTATGATTTGCCTTCTGAGTTCCATTTTGGAC TATTGGATTGGAAACCTGAGGGAAACAGTGTTTGGCTTGATATGAGAATCAAGATACCTGGTTACCCTGGGGGTTTGAAT TTGCAGCATAGCATAGAGTATTGGCTTACTTTGGATATTCTAGCTTCTGAACTACCTGAATCTTCTTCTTCTAATGCAAG GACTGTGATCAGAGTTAGAAACTCTGCTGAAGCTGATATAGTGTTTGTGCCATTCTTTTCTTCTCTGTGCTATAACAGAC ACTCCAAAAAGAACAAGGGTTTGCAAGAGAAGTTAGTGAGGTATTTGATGGCTCAAGAGGAATGGAAGAGGACAGGGGGG AGGGACCATTTGATCTTGGCTCACCATCCAAATAGTATGTTGGATGCTAGAATGAAGCTGTGGAATGCAACTTATATACT CTCAGATTTTGGGAGATACCCTCCAAACATAGCTAATGTGGAGAAAGATGTGATTGCCCCTTATAAACATGTTATTCCAC TCTATGTTGATGATCACTCCACCTTTGAGAGCCGTCAAACATTGCTTTACTTCCAAGGTGCAATACACAGAAAGGATGGA GGCCATGCTCGGCAAGAACTATTCAATCTTCTGAAAGATGAGAAAGATGTGCATTTTTCATTTGGGAGTGTTCAGAAAGG TGGTATCAAGAAATCCACCGACGGCATGCGTTCATCCAAATTCTGCCTCAACATAGCCGGCGACACCCCCTCATCAAACC GCTTGTTTGACGCCATTGCCAGCCACTGTGTCCCTGTCATCATCAGTGACCAAATTGAGCTTCCATACGAGGATGTCCTT GACTACTCCCAGTTCTGCATATTCATCCGTACAAGGGATGCTCTCAAAAAGAAGTTTTTGATAAACTTTATCAGGAGCAT TGGGAAAGATGAGTGGACTAGAATGTGGAACAGGTTGCAAGAGGTTCAGAGTTTCTATGAGTTTCAGTATCCATCTAAGG AGGGTGATGCTGTCCAAATGATTTGGCAGGCTGTCGCGCGTAAGGTCCCTTCCATGAAGTTGAAGATAAACAGGTCTAGG AGGTTCTTCAGGTCTCTTCATGGTAAATAG
Protein sequence (LotjaGi1g1v0650200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIADQRNVSAIKVFSRKSMCCFFTLTTFLFITSCLFVLRSTGSDAAPVSIDHVSQLLPTLNKTQNAESSFGNRAILVDS VKKNAEPPTIEKNIQQSSGVPCNSDKTATTSDSVVLKSLKVFMYDLPSEFHFGLLDWKPEGNSVWLDMRIKIPGYPGGLN LQHSIEYWLTLDILASELPESSSSNARTVIRVRNSAEADIVFVPFFSSLCYNRHSKKNKGLQEKLVRYLMAQEEWKRTGG RDHLILAHHPNSMLDARMKLWNATYILSDFGRYPPNIANVEKDVIAPYKHVIPLYVDDHSTFESRQTLLYFQGAIHRKDG GHARQELFNLLKDEKDVHFSFGSVQKGGIKKSTDGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDQIELPYEDVL DYSQFCIFIRTRDALKKKFLINFIRSIGKDEWTRMWNRLQEVQSFYEFQYPSKEGDAVQMIWQAVARKVPSMKLKINRSR RFFRSLHGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| ProSiteProfiles | 1 | 35 | 35 | 5.0 | – | |
| Phobius | 1 | 46 | 46 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 46 | 46 | - | – | |
| PANTHER | 10 | 487 | 478 | 1.3E-226 | – | |
| PANTHER | 10 | 487 | 478 | 1.3E-226 | ||
| Phobius | 21 | 39 | 19 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 40 | 46 | 7 | - | – | |
| Phobius | 47 | 489 | 443 | - | – | |
| Pfam | 117 | 422 | 306 | 5.8E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0650200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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