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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0656900 |
| Transcript ID | LotjaGi1g1v0656900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nascent polypeptide-associated complex subunit alpha-like protein; TAIR: AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein; Swiss-Prot: sp|Q9M612|NACA_PINTA Nascent polypeptide-associated complex subunit alpha-like protein; TrEMBL-Plants: tr|I3T8X0|I3T8X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0656900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121687215..121696661) extracted from Lotus japonicus Gifu genome v1.2.
TGATTCTATCAAATCACATAGTGTTTCACTTATTTTTCTCTCTTTATTCCTATATCTTGTGTAGACATAAAATATTTGAA CAATTTTTTTTTTCCAAACCGAATTAGGAAAAAAAAATTGATGTGGTGTACTAAGAAATGTAAAAGAAAATTGTTCCCGC ATGAATCGGGCATTGAAAAAACCAGGACATGAGTCATGAACCGGGGAAAACGGGTCAGAATCGGGTCGACCCAAATTGAG GTATAAAAACACAGTTCTAGGGTTTTGAGGTTGCTGATTGCATTGCATCTCCTGCTCCAGAATCCATTTCCGACATCACT ATGACTGCGGAGACACAAGAAGAGCTTCTTGCGAAACACCTTGAACAGCAGAAGATCCATGTAATTCAATCTCATCTCAC TCTACCCATGTTCTCTTCTTCTTTACTCGCTTGTTGATTCCATTTTTATTGTTAGAAATGCAGTATTGGTTGGTGGGTTT TGATTGGATTTTGGAAATGCTATGGTTCAGTGTGATTGTGTGCCTTGTTTTGTGCTCTTTCCCTTAGTTAACAATTTTCA TGGTCATGTGGCTTGTGGGGTATTAAGGGCTGTGTTACTGTTAGTTACTGCTCACTGTTTGCATGATTTCAGGGTTTTTG AAATTGAATGGTTATGTCATTGTTTTGATTGATTGTTCATTAGTGTTTGGACTGTGGTAACTTGAGATGTGGAAGGGTGT GGAAATTGCTATGGTTTGGGTTTATTCAAGGATCAAATTTTAGGAATATGTTTGGTGTTCACCCAAATGGTGTAGACAGT AGACACTAGAGTGAGAGTTATCAAATAGCGGCGCCGCTATAGCGTACTGGATTTTTGCCTAATTGCGACGCCGCTATTGC CCACTATAGCGCGCTATTCGCCGCTAAATAGCGGCCGAAATAGCAGGTTTTTGGCTCACCGCGATGGTCCTCTATCGCGA TTTGACAACACTGGAGTGAGCTAGGAAGAGTTGAGTGATAAGGGATAGAGCTGATATATGATGGGGTGTGACATAAAGAG ATAGAGAGAAAAAAATGACGATATAGTTTGGGTGTCTGCAAATTGGGACTCAACATTTCATGTGTAATAAATTGGAAGGT TTCTGGAAATTTAAATGTTACAGTAATTTGTCTAAAAAGGAAGAGTCTAGTATACAAATCAAAGATAGGAGAAAAACTCA ACCTTCAGAACAGAATGATCACATGCATCTCGAAAGGAATTTGATCCCTATTCCTTAGAGAACAATTATAATGAATAATA CATGTGTGTGTTCTTTACCTAAGTTGATGGTTGCAGCTAAATATTTTATTGTGATGATTAATATTAGTTAAACTGTAACA GCTGAATAACTTTTCTATTGCATTATTTTCAAAAGCCTACTATTTACTCTGTAGTCTAGCTTATGAACCTCTGAATACTA TTTTTGTAGCATGATGAGCCTATAGTTGAGGATGATGAGGATGAAGATGACGATGATGAAGATGATGATGAGGATGACAT TGGTGAAGGTAAGCTTGCATTCGGCGAAGTTTAGTGACATTTCTTGGATAATTATGATGGAATTAGTGTAAAGTAAAAAG AATGTATATGGTGTATAAGATTAGTTTGGTGTGCCTTTATTCTATTGACTGACTTTTAAATTAAGAAATGGTCTCTTGCA AATTTTGGTCTATTTTCTCATTTTCATTTTATTTTTGTTTGGGATCTTCTTTTACAAGATGCTATACATCAAGGTTCATA ATGTTTTGATAAACACTGGTTTTTATCGAAGATTTTGATAGCAGGAATTCAATTTTTTCTTTCTTTCTATGATAAGGCAT ACATTCGTCTATTTAGATTCAGAAACCAGTATCAGTACAAGTGTGGTGGTTCACATAATTTACTGGGTACAAATTGAATT AAGACTGGTATATCCTTTTATCTGGTCTGTAATGCATAATTCACAGGCCAGTTTAATCTGTATCAGGCAGATACAATTAT GAATCTGAGTAATTTGTGTCTCATTGCAGGTCAAGAGGGTGATGGATCTGGTAGGTCCAAGCAGACAAGAAGTGAAAAGA AGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGTGTGACAGTCAAGAAGAGCAAGAAT GTTAGCATTTAGCATTTCTGTTTATTTTTACTAGTTTTTCTGTTTCATCATCTATTTAGTATATGTCAACATTGATTATT TGGACTTCTGTTTCTTCAGATCCTGTTTGTTATCTCGAAACCAGATGTTTTCAAAAGCCCAACTACGGATACGTACATTA TATTTGGGGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAGTTCAAGGCTCCCAATTTG AGCAATGTAGGATTGAAGCCTGAATCCTCTGGTGTTGCTCAGGATGATGAGGATGAGGATGAGGATGAGGATGAGAATGA GACTGGTGTTGATCCCAAGGATATAGAGTTGGTTATGACTCAAGCTACCGTGTCAAGATCGAAAGCAGTCAAAGCTCTCA AAGCCGCCAATGGCGACATTGTTGCTGCCATTATGGAGCTTACTACTTGATGGTCAGATTTGGTAGAATATTGTTTTGTA AACTGGAACTATTTTTCTTTGCTGATCAAAATTTTGCTCTCCTTCAGTTTGAAATAGTGGTTTGCCAGTGTACCTTTACT TCTATTTTCTGTGTAATTTTCTTAATGGAAAACAAAAAAACTAGAGCCATGTGCTGCGATTGCATGTTTAATGCCATGAA TGACAGGCAAAATTAGCTATAATCAAAATATATATATTTGGTTTTTAGAGTTTAAGCTCGTCCTCCTTCGGTGTGTGGCT TGTAATTTCACTAGATCTGTCTTTTCAAATATAAGTAGGTTCAATTGAAAAACTGTCTCTTCAAACATAAGTAGGTGCAA TTGAAAAACTCTCTCTTCAAACATAAGTAGGTGCAACTGCAAAACAATTGAAGGTAGCCTAGCCTGTGTTCATGGCATGG CCACTGGACTTTGTAACGCATACTAGGACGACCTAGTGGATGTTGTAACTTTCGATTAACACAGCTGACCCAATATAGAT AGATGTTACATATACTGATATACATGAGGGGTTTTATTATTCCTTTGGCTTTATTACTACTATTATTTTACCAAGCTAGG GGCTTAAAGGAAAGGAATTAAAAACCCCTACTGAAGGAGGTGGCAGCACTATAAGCCAGAAAAGCTTAACTGCTAAGGGT CTGTTTGCTTTAGCGGTTGGTCCGATGGGGACGCGTGTATTGGAGGAAGCTGCAATTGGGAGCATCCGGATCCAAGCGGT GGTGGAGGCGTGTGTTTGGCAGTGGAAACGCCCACCAAATTGAGCGGGCACTAAACGAAGAAAGAAAATCATAGATGTGT GTCTCGTTAGTTAATGAAATTCCATTTTTGGCAAGATCACAACCACCATGTTGCTCTATCTGTAAACATAACTCTAGCAG ATAAGATCATTAGGTTGAATGTGGCTTTGGATCTCATGAACTAAACTAGCACCATAATGGATGTCCTTGAGACCTAAGTG CACCATTCGAATAGTATGATTACTCACTTTAGAGGGGAGAGCTGGATTTAGCACCCCAACCCTTAGATTTCACACCCCTA ATTTTCGGATTATCGGGTTCCGAATTATTTCGGAATCTTATATTCCGAAATTAATTCATGATTTGTAGTGCAAAATACAT GTAACACCCCACTTTTGAGTGAAAAAATGCTTCGGAAACTTTATTTCCGAAATATTTCGGAAACTAAATTTCCGAAAGTG GGGTGACATTTCTAATGAGTGAGGTGCCAAATCTAGCTCTCTTTAGAGGGTAAAGTAAGTCATCGTAATCATTAATAGTA ATTACCTACTTTAAAAAGTCAACAAAACAAATCAATCACCGATGGTGATGATTACTTTACCATCTAAAGTGAGTTTTTTC ACTATAGAGGAGCATTAGCACTAGATGGATTAGAAGACAACTTAAAATCACCAACTTGAGACAATCACCATCAAACAATC ACTAGATACTTAACGTAACATTCTTATTTGTTTGATGACTCAAGAGGAGATTTTATGACGTTCTATTTGAACTTCTAAGA AATAATGTAAATTTACAAGACATTTGTAAATAGGGTAAATGTATTTCCTATACCTATTATATATAATACACTCCTTCGTA TAGTTTATTTGATTTCCTTTCATTCAACATGGTATCAAGAGGCACAAGAGGTATCCCTTATCCTAATATGTCCAAAAGGA TCCATTATCCATTAGTGTAATTTTTTTTCCCAAAGCCGTGTTCTAACTCTGGTCTTACCCATTGTTGTGTTCCATTTTTA GCAACTTTCCACTACTTTTTCCGACCGCCGCGACTGTTTTCTAGCCACCGCAGCCGCATCTGACATTGTTTTCAGTTGGC GAGCCCACTACAAGAATCACATCGTCCTTAAATTCTTTTTCGGAGGTCGCACTCGCCCACACGCTCCATAACCACCAACA ATGCTTTCTTGCAAAACCGCTAATGTCCATCGCCCATGGAGGCGCGACAATGACCTACCAGTCGAACTTCCTTCTACTAG ACTTGCCTCAACATCATTGTTCCAAATTTGTGCTTCATTTTTAGGTTCACGGTATTTTCCACCTATGTTCTGCTTCTTTT GACACATTGTCAATTGTTTTATCTCTCTTTCATGGTACCCGAACTTGTGGTCCTCCAAACTTTCCCTCACAAAGGTCTCT ATCGATTCTCACATGCACTTTACCATGGCTTTAGACATGACATTACCATATCTCAATTGAGGTTAGGTTAATTATCGATG GTTGCTCATATCCGTTGATACTTTTGAGGAAGAGGAGCATGTGACCAGAGCTCCACTGACCTCCATATACCTTAGGCATG GGTGGAGGAAGGCCAGGAAGGGGGACACATGAGTGCCATGGCCTCCCTAAGTTTTTTTTTTTCTTTACATGTGATACAAC GTCAGCTATAAAAATAGCCGTACTTTTATGCATATCATATTATTTGATCTTAGCCCATAGTCCCAACTTCCTTCATCCAC CACTATTAGGGATGGGATCTGGATGAAAAAAAGGTTTTTAGAAAGATCCTTAATTCCCACGTGTTAAAGTTTCCATGCGA AGACCATCATCTCGTTAACAATCCTTACATTATAACTTTCTTTTATCGCAACCTTCCTTGCGATTGATTGCTTACGATTT GTAACCTTCGGAGAATAATCCCATGTAGGGATGATGATAAGCAAACAAGTGGCCTTCATATGTGTTTTTCAAACAAGAAA AGAACATTGAGAAGATGATGGATGCTAAAGAATATGTTTTTTTTTAGTTTAAATCACATATGTATCCTCTAGCAAGATAA TTCTCTCTGAGTCGGGTAAGATCATTGTGGGCAACAAAAAACTTCATACCAAGTATTTAACGCAGTTGCATTTGTAGAGA CTTGAACCTGAGATCTCAACTTAAGTTAGAATAATCCACGATATCTACCCAAGACATCTATCTGCCTTAACCAAAACAAT ATATTCTATTTTTTTTTTGTCAAAGGTGAACATTTCATTGATAATATTGGTCGGGCCCACAACCCGAGAGGGGTGCTAGT TTTTTTATTAATACAAGTGCGAGAGATACTCTTTTTTTTGTTACAAAAAGTTTCGGGTGAGACGATGATGCTTCATTCAA AGATAAGGAAAGCTGTCGAGCTTAAAAAGCACTTAAAAAGACTTACATTTACCTCATCCGAAAAGACTAGCGGAGGTTCG AACCTACAATACTCCTTTCTACTATTTACACACCCAACATCATTGTTTTACTAAAATGTGTTTAAAGTGTAAACTATAAG CCCAATTCTTTTTGTTTTATTGGGTCAATTGGGTCTATGAACAAAGCTTGGAAGAAAATGCTGACGGGCCAAACTTGAAC CGGGCCAACCCGTCTTGAAGGTATATTAAAGTAAAAGCTCAGTTCTAGGGTTTTAGGTTGATCGATCTGATCTATTGCTC CAGAAATCTCCTCTGTCTGCACCGGCACCCACCGATCAACCGCCATGACTGCCCAGTCCCAAGAAGAGCTTCTCGCTGCT CATCTCGAACAGCAAAAGATCCATGTAATTGCTTCTCTTTTCAATCCTCTTCTTGTTCATTTTCCCCCATTTTTTTTGCT TTTTTTTTATTTTAATTTTCAATCAGTAGTGTTTCTGGATTGTTATTTGATTTGAAATGGATTGTTTCAGTGTGATACTG TGATTGTGTGCAAACTTTTGTGTTTTTTTCGATCAGTTGAACCCTTTTTAGGGTTTTGTAGCTTGTGGGCTATGAAGGGG TGTGTAAGTTTAATCTCTTGTTTCAGTTTTTTGAAATTGAATGGTTAGGGCATGATTTTTTCCTATTGGGTTGTGGAAAA TGGTAGAAAGTTACGAGCTTTCGATTGATTCAATGTTGGGCATTTTTCTATGTAATAGATTGGAAGGTTTCTGAGGATTT AGATGTTTGTGCAATTTGTATGAAACAGAAGAGTCTGATTTTGAAATCACAGATAGGAATAGAAGAGAAACTCAACATGG GTTTTGATATTGATAGCTAGACTCCTAATAGCCCCAGTTGATTGTTGCCGCTTTTTTTTGTGATTACTCTGGATTGGCCA CAGCTGATGAACTTTTTTACTGGCATGTTTAATGGCTTACTTTTTGTTGTGATTCTAGTATTTTGAACTTGTGGGTAATA TCTTTTGTAGGATGATGAGCCTGTAGTTGAGGATGATGATGAGGACGATGATGATGAGGATGACGATGATGAGGATGATG ACAACATTGAAGGTAAGCTGGTGAATAATATTTACTGAAGTAGTGCTTATGACTTCTTACTCATTTTTATTCTTGCATTT GGCACTGGTTTAGTTGAATTCATTCTTTAATTTGGTTGGGATTAGTATGAAGTAAAAAGTGTGTATGTGGTAAATAGGAA TTAATTTGGCTTGGCTTTGTTCAAGAGGTGGCCTATTGTGGCTTAAATTAAGAATTTGGTTCTTTGATTTTTGTTCAGTA GTTATTCATTTTCTTTTCTTTTATATGGAGCATTTTTTACAAGGCTTAATCACCGTTGTCAGGGTATCAGAAGGTTGTTT ACTCCTGTTTTTGGTTTAATTTTTTATTATCAGGGGGATTTTTGTTTTCTCTTCCTATATTATTTTATAATTTCATCTAT TAATTTAGAAATCACTTTCACTGTGGTACGAGTGTGATAATTAACATGATTTAATGGTACACATTGAAATAAATCTGTAG CTCTCTTACTGTTGTTCTGTGTTATAAGACCTGACTTGATAGTTAATGCCAGTGCCTTTCATCTCAGAATATATTTCAAA ATGCATTTAGATTTTGATGGGCCTCTAATCTATTCTGTGCCACCTAGTTAATTCTGCTATTTCTTTTTGTATGAACTGGA TCTAATGTCAGTTATTTATGGATACTATTAAGAGTCTCTGAGGAGTTTGTGTTGTATTGCAGGACAAGAGGGTGATGCAT CTGGTAGGTCAAAGCAGACCAGAAGCGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAACCTGTTACAGGT GTCAGTCGTGTGACAGTCAAGAAGAGCAAGAATGTTAGCATTTGACATTTGTAATTTATCTGGTTTTCCATTGTTTCATG TATTTTTTGTTCTTGTGAAAATTGAATTCTTGGACTTCTGTTTGTGCAGATTGTGTTCGTCATCTCAAAACCAGATGTTT TCAAGAGCCCAACTTCAGACACATACATTATATTTGGTGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACCCAG GCAGCAGAGCAGTTCAAGGCTCCTAATTTGGGCAATGTAGGTTTGAAGCCTGAATCCTCTGGTGTTGCTCAGGATGAAGA GGATGTTGATGAGAGTGTAGATGTGGACGAGACCGGTGTAGATCCCAAGGATGTAGAGTTGGTGATGACTCAAGCTACCG TGCCAAGACCAAAGGCTGTTAAAGCTCTCAAAGCTGCAAATGGCGACATTGTGGCTGCCATTATGGAGCTAACAAATTGA TAGTAAGATTTGGTACAACTTTAGTATTTGGAATGTGGAGCTGTTTTTCTTTGTTGATCAAAATTTTCGCTGTCCTTGGA TTGCAAATACTGGCTTGCCAGTAATGTTTTACTGTCCCTGCGGAAGGAAAGACTACAGCCTCATTGGCCATATGTTTGAA GTGTTATTTACACCGTCGTAAGAAATGGATATGGTAACATGGTCACCGAACTCGTAATTTTTATCATGGTACCTAGCGCT TTGGTATTTAGTGCATGTTTGAATTAAATTAGGATGACATTTTTGTTGGATTAGGGTCAAAGTTGGTTTTTATTATTTTT ATTATGAACCGAATATGTCTTGAAACATGATCTTATTGGTTGAGCTAGTTTGGTTTTGGGGGAAAAATAGGTTTAGTTTT CTGTAACTGAACTGAATTAAACTAAATTGTCTGGTTTTAGGGAAAAATTGGTTTGGGTTTATGTAACTGAACTGAATTAA ACTAAATTGACTGGTTTTGGGGAAAAATTGGTTTTGTTTTACTTAATTGAACTAAATTGTTTGCTGGATGTATTGATTTT TTTTTTTTTTTTTTTTGGAAGTATGTAACAAAATTTAACATTTCATAACCTGTCTGTGGGTGTATTGGGAGCACGTGTTT ATTGCAAACTGCAATCCACCAGGATCATAGTTTTTAATTTTTTTTTGTCTTGCAACGGGTAAAAATATGGTAAAATCGAT TAACCACTCTAGGACAAGTTTAGCATGTTCTCTGACAAATGTGTAACAGTGAGCACTGAGAAAGGAAGTGTTTTGAGTGG TGAAGGATAGTGTTTTGCAAGCAGCTCAGCAAGGATGGTGATGGGAGCTGTGATTGTGTAATTTGTGTTTCTGGTATGAA GCATTAGAAGAAACCCTAATTTTTTTTGTTCAAAAGAGTTTTCGGCCAATGGTTCCTTCATTCATATGGGCAAGGGCAAA TACATCAAAGAGGCCTTATAAGCCCAAGAACAGCAATGCATAATCGCGAAAGCAAAGGCTAATACATTCTTATTTTCTAA CTTGTTTAACTAATATCACCATTTAACGTTTGGATCCACGTTAAATTCAACATGTTATAATCTAGCTTACATTAAACTTG ATGTTGTCATAATCTAGCTTCTATCGATATTAAACTCAATGTTGTTTGAGATACGTGAAATCACGTTTGTGTTGAAGAAT TTCCGCACCACATCATCAAACTAAGATAAAGGGCATGAGTCAAAAGCCACTTTATATAGTCACTAGACGTAAGAATAGCA AACCCTA
CDS sequence (LotjaGi1g1v0656900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGCGGAGACACAAGAAGAGCTTCTTGCGAAACACCTTGAACAGCAGAAGATCCATCATGATGAGCCTATAGTTGA GGATGATGAGGATGAAGATGACGATGATGAAGATGATGATGAGGATGACATTGGTGAAGGTCAAGAGGGTGATGGATCTG GTAGGTCCAAGCAGACAAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTCACAGGTGTC AGTCGTGTGACAGTCAAGAAGAGCAAGAATATTGTGTTCGTCATCTCAAAACCAGATGTTTTCAAGAGCCCAACTTCAGA CACATACATTATATTTGGTGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACCCAGGCAGCAGAGCAGTTCAAGG CTCCTAATTTGGGCAATGTAGGTTTGAAGCCTGAATCCTCTGGTGTTGCTCAGGATGAAGAGGATGTTGATGAGAGTGTA GATGTGGACGAGACCGGTGTAGATCCCAAGGATGTAGAGTTGGTGATGACTCAAGCTACCGTGCCAAGACCAAAGGCTGT TAAAGCTCTCAAAGCTGCAAATGGCGACATTGTGGCTGCCATTATGGAGCTAACAAATTGA
Protein sequence (LotjaGi1g1v0656900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTAETQEELLAKHLEQQKIHHDEPIVEDDEDEDDDDEDDDEDDIGEGQEGDGSGRSKQTRSEKKSRKAMLKLGMKPVTGV SRVTVKKSKNIVFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLGNVGLKPESSGVAQDEEDVDESV DVDETGVDPKDVELVMTQATVPRPKAVKALKAANGDIVAAIMELTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 206 | 206 | 2.2E-104 | – | |
| MobiDBLite | 1 | 72 | 72 | - | – | |
| PANTHER | 1 | 206 | 206 | 2.2E-104 | ||
| MobiDBLite | 8 | 25 | 18 | - | – | |
| MobiDBLite | 26 | 47 | 22 | - | – | |
| MobiDBLite | 48 | 69 | 22 | - | – | |
| ProSiteProfiles | 59 | 124 | 66 | 17.629 | ||
| Pfam | 62 | 117 | 56 | 8.4E-23 | ||
| SMART | 62 | 118 | 57 | 9.1E-26 | ||
| Gene3D | 68 | 121 | 54 | 8.9E-32 | ||
| MobiDBLite | 137 | 165 | 29 | - | – | |
| Gene3D | 166 | 205 | 40 | 6.7E-13 | – | |
| CDD | 169 | 205 | 37 | 8.97391E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nascent polypeptide-associated complex | A heterodimeric protein complex that can reversibly bind to ribosomes, and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome. |
Expression pattern of LotjaGi1g1v0656900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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