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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016641
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.461s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0257769.2
n.a. Nascent polypeptide-associated complex subunit alpha [Medicago truncatula] gi|357464241|ref|XP_003602402.1| chr0 133821494 133824453 +
2 domain predictions
1 GO term
Lj1g3v1090980.1
n.a. PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2-like [Glycine max] gi|356516170|ref|XP_003526769.1| chr1 13599324 13601652 +
2 domain predictions
1 GO term
Lj1g3v4081730.1
n.a. PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein-like [Glycine max] gi|356571874|ref|XP_003554096.1| chr1 48149433 48152396 -
3 domain predictions
1 GO term
Lj1g3v4081760.1
n.a. PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1-like [Cicer arietinum] gi|502107593|ref|XP_004493313.1| chr1 48155084 48157879 -
3 domain predictions
1 GO term
LotjaGi1g1v0042200.1
n.a. Nascent polypeptide associated complex alpha subunit, putative; TAIR: AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2; Swiss-Prot: sp|Q94JX9|NACA2_ARATH Nascent polypeptide-associated complex subunit alpha-like protein 2; TrEMBL-Plants: tr|I3S057|I3S057_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0042200 LjG1.1_chr1 5810229 5813181 +
2 domain predictions
1 GO term
LotjaGi1g1v0300500.1
n.a. Nascent polypeptide associated complex alpha subunit, putative; TAIR: AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2; Swiss-Prot: sp|Q94JX9|NACA2_ARATH Nascent polypeptide-associated complex subunit alpha-like protein 2; TrEMBL-Plants: tr|I3SFN2|I3SFN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0300500 LjG1.1_chr1 73345254 73348419 +
2 domain predictions
1 GO term
LotjaGi1g1v0656900.1
n.a. Nascent polypeptide-associated complex subunit alpha-like protein; TAIR: AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein; Swiss-Prot: sp|Q9M612|NACA_PINTA Nascent polypeptide-associated complex subunit alpha-like protein; TrEMBL-Plants: tr|I3T8X0|I3T8X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0656900 LjG1.1_chr1 121687215 121690714 -
2 domain predictions
1 GO term
LotjaGi1g1v0656900.2
n.a. Nascent polypeptide-associated complex subunit alpha-like protein; TAIR: AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein; Swiss-Prot: sp|Q9M612|NACA_PINTA Nascent polypeptide-associated complex subunit alpha-like protein; TrEMBL-Plants: tr|I3T8X0|I3T8X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0656900 LjG1.1_chr1 121687215 121696661 -
2 domain predictions
1 GO term
LotjaGi1g1v0656900.3
n.a. Nascent polypeptide-associated complex subunit alpha-like protein; TAIR: AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein; Swiss-Prot: sp|Q9M612|NACA_PINTA Nascent polypeptide-associated complex subunit alpha-like protein; TrEMBL-Plants: tr|I3T8X0|I3T8X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0656900 LjG1.1_chr1 121688502 121690537 -
3 domain predictions
1 GO term
LotjaGi1g1v0656900.4
n.a. Nascent polypeptide-associated complex subunit alpha-like protein; TAIR: AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein; Swiss-Prot: sp|Q9M612|NACA_PINTA Nascent polypeptide-associated complex subunit alpha-like protein; TrEMBL-Plants: tr|I3S1S2|I3S1S2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0656900 LjG1.1_chr1 121693405 121696661 -
2 domain predictions
1 GO term