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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0663800 |
| Transcript ID | LotjaGi1g1v0663800.7 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT5G06950.1 bZIP transcription factor family protein; Swiss-Prot: sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1; TrEMBL-Plants: tr|I3T9L1|I3T9L1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0663800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122538260..122543200) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAGAGTGCACAACCTTCTGAAAGCTTTTCTTAATTGGCGACTTAAAAAGATTGCTGTGACTTTTTGTGTTCAAATCA TCTCATGGATTTGTTGTTATATCTCGAGTAGCCAAGTTAGACTTTTCTTTAGCTTGAATAGGTGGATTTCACCAGTGTCG TCATAGCTCTCTGATCCTCCAGTGGATAATTTGGATATGCTTTTAATAACTCTTTTTTTACATGTTCTCATGCTTTTGGT GTTCAGGGGCATTGAAGCAACTAATGTTCATCCTTCTCGAATTTCTGAATTTGGAGCCCTCGAACAATCTCTTGGATTTC GTATTGAAGATACCATGAATCTTAGCAGAAGTATGTTGCTCACTGTTTGATCTCTAACAGTTGGACTACCTTTTTTATGT CGTACTTCTTGTTACTGTGAAGTGTGGGCTGCTGTTTTATGAATTTAAGATCTTGTCTCGCATTCTCGTTGCTTATGTTG TTGTGCTTGCCAATGCTTTTTATTCAAAAGTGAATCATATCCTTTCCAATTACATTTGTTTGTAACTTGCTGCTAAAGTA GGCCTTCCATTCTATTTCTACTTCTCGGGGCTAAATTTTTTATTGCTATGAATGATGCTAAAATGTTTGTACCTCAAGGA AATCTTGGTTTTCTTGATTTTTCTTGTGGATCTTTGTCTTTCTGAGCATTACTTTGTGAATTCACCATGGCTTACTGTGT CTGATGTTGTATAATTTATATTTAAAATCTAATGAATCATATCTTCTCCAATGGTTTTCACTTGTTCCTAATCTGTTATT AACATGAGCCTTCATCAGATTTCTACCTACACTGTTCTAGAAGAAATTTGTGTTTCCTCAAGTGTGATCCTTCAAAAGCA ATCAGAAGATATAGGATTATTGTTGGAATAAAATAACTAGATGTTAAACCAAAAACTGTTTCATTAACCTCACAGAAAAC TCATTAAAAAGTAACTGAACAATGATAGAAATACATAGTATTAGAATAGTCGCCCCCCTCTTGTTGGCACTTAATCTAAC CACCATGACCCTTTTATTTGTATATTATGTTTCAGATCCTGTGTTCAATCAAATGAAATCAAATAGCCAGGCTCTTGGTG CTGATATTCAGTTCGGTGCTTTGAGCAAGGTAAAATTATATCTTCTTTATGCGGTTATGTGCTTTCAATAATCAATTAAC TGCAATATGATGAAGTCCTGGATTTCTCTTGCATGTAAGATACAGTCAATTGCAACCTCGGATAATAACCTCTCTGCTGC AATTGCGGGGTCTCAGATGATGCCATTACAGAAAGACTCGCAACCAAATCTGGCTTCAACATCTGGAGGTCATCGCGAAA ACTGGGGCGAGTCCAACACGGGTGATGCGAGCCCTACATCAACAGATGATACAGATGATAAAAATCAAATGGTGATTATT TTACTTTAATTATACAGTTTATTCAGCATCTGTAATTCAATCTATTCATCGATTGAAATCAAATGCCTATTGGTGATGCC CCCTGGAGTTATGATGTGATATTGGGGATAATTTTTCCTTCTAATTGTTCATTGTTATCAAACTTTTAAGAGCATGTTAT TCATACTTTAAAAATGGTTCTTCATTGTTATTTTGCAGGTTGAAAGGGGTGAATCCAGTGATAGATCAAAAGATAAAACA GATCAAAAGGTTATATAAAGTAATCATATTCACATAACATAAGCTTTTGGTACTATATGTTAAATTTTTGTGTTCCATTC AGACATTAAGACGGCTGGCTCAAAATCGTGAAGCTGCTAGAAAAAGCCGACTGAGGAAAAAGGTAGGGCCTTTTGTTAAT TGTAAATGAACTTGTAAACTTATTCCTTCTGTTGTAGCTTTGTTAGTTGTTAAATGTAGCATTGCTACATTGTTGACAAA TGACAACTTTAAATATTTTGCATGCTTTGATTTCTTATTCTTTAAACCCTAATTTCTTTTCATTCAGGCATATGTGCAAC AGTTAGAGAGTAGTAGGTTGAAACTTACATTGTTGACAAATGACAACTTTAAATATTTTGCATGCTTTGATTTCTTATTC TTTAAACCCTTATTTCTTTTCATTCAGGCATATGTGCAACAGTTAGAGAGTAGTAGGTTGAAACTTACACAACTGGAGCA AGAGCTCCAGCGAGCTCGCCAGCAGGTTTGGTTGTGTTAATTTATTCATTTTATCCATTCAAAGTTTTGTTCTCATCCTT TTGAAACCCTTTTTTTCGTTAGCTTACATTAATCTAGTTATGTTACTACAGCCTCTGTGACAATTTGGTTATTAATCTTT TTCCAGGGAATATTTATTTCAAGCACCGGAGAGCAGGCCCATTCAATGAGTGGAAATGGTATTAATCTTCTTTTACCTCT AATCGTATGCCTCAAGCTTGAAAATGTTTATTGCATTGAAATCCTTTCTACTTAAGCACTTATTGTACATGATAGAATAT GGTTTTACTTGATGTGATTCGGACAGCATCATGTGTATGTGCATAAGTGCAAGCCTGTTATATGATTTTAAACTCTTACA ACATAGCACCACATGGTGGTCATTGGCTGGGATTTTCCGTATGTTTCTGTTATGTTTCAGATCATTAATCCATTGATTAA TCATCTTGGTATGCAGGTGCTATAGCATTTGATGTTGAATATGCGCGATGGTTAGAAGAACATAATAGGCATACCAATGA GCTAAGGGCTGCTATCAATTCTCATGCTGGAGACATTGAACTTCGTACCATTGTTGACAATTTCATGACACAATTTGACG ATCTCTTCAGGCTGAAAGGTATCGCTGCAAAAGCTGATGTTTTTCACATCCTGTCTGGAATGTGGAAGACTCCAGCTGAG AGGTGTTTCATGTGGATTGGAGGCTTTCGCTCTTCAGAAATTCTCAAGGTGAGAATTTTTTTGTTTATTTATGCTTTATG GTTAGATATGATTTTTTCCTGGTCAACAATGTGCTGAAGTACAAGTGTGGCAATCAATTTATTATGATTTCTCAAAAACA TTTTGTGCTTGTGTTCTGTTCATCCAGTGTGTGTATGGAAGTTCCGTAGCAATCTCTGTAAGAACAGTCTGCTTTACCTT TTGCTAATGTTTAACTAATTAATTATCTTTAAAAGGTTTGGGGAATGGTCAATCATATGAAGCTGTTTTTCATGCATCTC TCAAGCATGTGATTCATTTCCGGTGTACATACTTCTGTGTAAACGTGCTTTTAGTTCACAATAAAACTGACATGTGTTGT TATTGTATGGTACTGAATGATGAAATTGGATCACTTGATGTGCTAGAGGAGGAATAATATATATTGTAATGCTAACAATA AACATTTTTTTTGTGCGCTGTTTTATGAACTGTGAGAGTTTGAAGACGATGGTTGAAAATAGCTAGGTGGTTGTATGAGA AGACATTTTCCTTGTTCATTTTTCATCTTGCCCTAGATCTTTGATAGATAAAGAGGTATTATAAATCTATCTTTGTGCCG ATATGCTTTTTTCTCTATTTTATGGGATGGGGGGGGGGGGATTCCAACAAGTCCAATGGAAATTAACTAAGACAATGGTT CAGACCTTTTGAATGTTCTTCAGAAGTTTTAATTCCATAATCATTCAATCGAAATGTGGAAACAATTTTAACGGGGACTG TTTTCCCCATCCTTCTAGTTTGGTTTGAAAATTACTTCCCTAGTATTGAACACCCACCACATCCTCCGCACTATGAATAT ATATGATATATAAAGTGAGGGAAAAGCCCAGGGGATTCTAAATATACAGCAATTCAGCCCCTATGTTCTTGAAGTTGTTG AAAAAAAAAATCCAAGATATTCTTGAGGAACCTTATCTTGATACCAAGTTATTCAGGTTTTGAATTATCAAGTTCATTCC CTTTTGTCATGTGATGCCATCTAAAACTGGGTTGACACTATTTCAGCTTCTTGTAAATCAATTGGAGCCTTTAACTGAGC AACAATTGATGGGCATCTACAACTTGCAACAGTCATCCCAACAGGCCGAAGATGCTCTATCCCAAGGAATGGATGCATTG CAGCAATCACTATCTGAGACCTTGGCTAATGGTTCACCCAACCCATCAGGCTCTTCAGGAAATGTGGCCAACTACATGGG GCAAATGGCTATGGCGATGGGAAAGCTAGGTACCCTCGCTGGATTTCTTCGCCAGGTAAACTAGCTGATTGTATCTGCAT CTGTTTCCAATTTCTCAAACTTAAATCTTTTTGAAATGATGAGAAATCAGGAGTTTAGAACTGAATTTTAGATGGACATA GAAATAGAACCAAGTGTTTTTTTGTTTCTCAGTTATTTTTAAGTAAAAGAAGTTTTTACTTTTTATTCCATTTGGAAAAA AAGATCTATTCATTTTGTATAAAGTCGGATGCAAACTATTCTAGATATAGGCCACGTTTGGAAGAGTTTATTCGAGTTTA TCTTATAGTAAATGTTTTGGAGAACATATATAAAATATAAATAGCTTATGACCTATCGTTAAACTGTTTTAAGCTTATTT TCATAAGCTACTAAGTTGAGCTTATGAATAAGTGCTTATATATGCACCTATAACATATTTTGAGCTTATTTCAATAAGCT TCTCAAATTAGCTTATGAATAAATGCTTACTCAATAAGTGCTTAATTAAGTTGTTTACCCAAAAATGCACCTTAGTACAA ATGTGATTGATTGATTCATCAGAAATGAAAGCAGTAGTTACAATATTTGTCGATTCACTTTTTCATGTTACTAGGCTGAT AATCTGCGGCAGCAAACATTGCAACAAATGCTTAGGATATTAACAACTAGACAATCCGCTCGAGCCCTTCTCGCAATAAG TGATTATTTCTCCCGGCTGCGAGCCCTGAGTTCTCTCTGGCTGGCCAGGCCACGGGAGTGA
CDS sequence (LotjaGi1g1v0663800.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCTTAGCAGAAATCCTGTGTTCAATCAAATGAAATCAAATAGCCAGGCTCTTGGTGCTGATATTCAGTTCGGTGC TTTGAGCAAGTCAATTGCAACCTCGGATAATAACCTCTCTGCTGCAATTGCGGGGTCTCAGATGATGCCATTACAGAAAG ACTCGCAACCAAATCTGGCTTCAACATCTGGAGGTCATCGCGAAAACTGGGGCGAGTCCAACACGGGTGATGCGAGCCCT ACATCAACAGATGATACAGATGATAAAAATCAAATGACATTAAGACGGCTGGCTCAAAATCGTGAAGCTGCTAGAAAAAG CCGACTGAGGAAAAAGGCATATGTGCAACAGTTAGAGAGTAGTAGGTTGAAACTTACACAACTGGAGCAAGAGCTCCAGC GAGCTCGCCAGCAGGGAATATTTATTTCAAGCACCGGAGAGCAGGCCCATTCAATGAGTGGAAATGGTGCTATAGCATTT GATGTTGAATATGCGCGATGGTTAGAAGAACATAATAGGCATACCAATGAGCTAAGGGCTGCTATCAATTCTCATGCTGG AGACATTGAACTTCGTACCATTGTTGACAATTTCATGACACAATTTGACGATCTCTTCAGGCTGAAAGGTATCGCTGCAA AAGCTGATGTTTTTCACATCCTGTCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGC TCTTCAGAAATTCTCAAGCTTCTTGTAAATCAATTGGAGCCTTTAACTGAGCAACAATTGATGGGCATCTACAACTTGCA ACAGTCATCCCAACAGGCCGAAGATGCTCTATCCCAAGGAATGGATGCATTGCAGCAATCACTATCTGAGACCTTGGCTA ATGGTTCACCCAACCCATCAGGCTCTTCAGGAAATGTGGCCAACTACATGGGGCAAATGGCTATGGCGATGGGAAAGCTA GGTACCCTCGCTGGATTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTGCAACAAATGCTTAGGATATTAACAAC TAGACAATCCGCTCGAGCCCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCCCTGAGTTCTCTCTGGCTGGCCA GGCCACGGGAGTGA
Protein sequence (LotjaGi1g1v0663800.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLSRNPVFNQMKSNSQALGADIQFGALSKSIATSDNNLSAAIAGSQMMPLQKDSQPNLASTSGGHRENWGESNTGDASP TSTDDTDDKNQMTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQAHSMSGNGAIAF DVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFDDLFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFR SSEILKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKL GTLAGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 92 | 86 | 7.6E-211 | – | |
| PANTHER | 7 | 92 | 86 | 7.6E-211 | – | |
| MobiDBLite | 48 | 81 | 34 | - | – | |
| MobiDBLite | 48 | 91 | 44 | - | – | |
| SMART | 85 | 151 | 67 | 1.9E-5 | ||
| PANTHER | 90 | 377 | 288 | 7.6E-211 | – | |
| PANTHER | 90 | 377 | 288 | 7.6E-211 | – | |
| ProSiteProfiles | 90 | 134 | 45 | 8.795 | ||
| SUPERFAMILY | 93 | 136 | 44 | 4.56E-7 | – | |
| Gene3D | 93 | 139 | 47 | 1.1E-9 | – | |
| CDD | 93 | 144 | 52 | 4.47161E-22 | – | |
| Pfam | 94 | 132 | 39 | 1.2E-6 | ||
| ProSitePatterns | 95 | 110 | 16 | - | ||
| Coils | 111 | 138 | 28 | - | – | |
| ProSiteProfiles | 157 | 374 | 218 | 33.465 | ||
| Pfam | 174 | 249 | 76 | 1.5E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi1g1v0663800.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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